Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:39:53 (349454): wrapper (7.7.26015): starting
15:39:53 (349454): wrapper: running run_atlas (--nthreads 4)
[2026-03-22 15:39:53] Arguments: --nthreads 4
[2026-03-22 15:39:53] Threads: 4
[2026-03-22 15:39:53] Checking for CVMFS
[2026-03-22 15:39:53] No cvmfs_config command found, will try listing directly
[2026-03-22 15:39:53] CVMFS is ok
[2026-03-22 15:39:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-22 15:39:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-22 15:39:53] Further information can be found at the LHC@home message board.
[2026-03-22 15:39:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-22 15:39:53] Checking for apptainer binary...
[2026-03-22 15:39:53] which: no apptainer in ((null))
[2026-03-22 15:39:53] apptainer is not installed, using version from CVMFS
[2026-03-22 15:39:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-22 15:39:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-03-22 15:39:53] apptainer works
[2026-03-22 15:39:53] Set ATHENA_PROC_NUMBER=4
[2026-03-22 15:39:53] Set ATHENA_CORE_NUMBER=4
[2026-03-22 15:39:53] Starting ATLAS job with PandaID=7057341449
[2026-03-22 15:39:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-22 23:35:11]  *** The last 200 lines of the pilot log: ***
[2026-03-22 23:35:11] 2026-03-22 22:34:39,190 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2158210/.job.ad'
[2026-03-22 23:35:11] 2026-03-22 22:34:39,190 | INFO     | total number of processed events: 400 (read)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,203 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7057341449/memory_monitor_summary.json (trf name=prmon)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,204 | INFO     | extracted standard info from prmon json
[2026-03-22 23:35:11] 2026-03-22 22:34:39,204 | INFO     | extracted standard memory fields from prmon json
[2026-03-22 23:35:11] 2026-03-22 22:34:39,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-22 23:35:11] 2026-03-22 22:34:39,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-22 23:35:11] 2026-03-22 22:34:39,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-22 23:35:11] 2026-03-22 22:34:39,212 | INFO     | fitting pss+swap vs Time
[2026-03-22 23:35:11] 2026-03-22 22:34:39,213 | INFO     | sum of square deviations: 31581087018.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,218 | INFO     | sum of deviations: 60872234524.000015
[2026-03-22 23:35:11] 2026-03-22 22:34:39,219 | INFO     | mean x: 1774204652.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,219 | INFO     | mean y: 2334700.1349036405
[2026-03-22 23:35:11] 2026-03-22 22:34:39,219 | INFO     | intersect: -3417427311.4944024
[2026-03-22 23:35:11] 2026-03-22 22:34:39,219 | INFO     | chi2: 2.01578046763097
[2026-03-22 23:35:11] 2026-03-22 22:34:39,220 | INFO     | sum of square deviations: 30577524015.5
[2026-03-22 23:35:11] 2026-03-22 22:34:39,225 | INFO     | sum of deviations: 86751434839.50002
[2026-03-22 23:35:11] 2026-03-22 22:34:39,225 | INFO     | mean x: 1774204499.5
[2026-03-22 23:35:11] 2026-03-22 22:34:39,225 | INFO     | mean y: 2338597.1277056276
[2026-03-22 23:35:11] 2026-03-22 22:34:39,226 | INFO     | intersect: -5031253591.445225
[2026-03-22 23:35:11] 2026-03-22 22:34:39,226 | INFO     | chi2: 1.3524330571597727
[2026-03-22 23:35:11] 2026-03-22 22:34:39,226 | INFO     | current chi2=1.3524330571597727 (change=32.90772091123549 %)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,227 | INFO     | sum of square deviations: 29595449788.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,232 | INFO     | sum of deviations: 85362864297.99997
[2026-03-22 23:35:11] 2026-03-22 22:34:39,232 | INFO     | mean x: 1774204347.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,232 | INFO     | mean y: 2338381.536105033
[2026-03-22 23:35:11] 2026-03-22 22:34:39,232 | INFO     | intersect: -5115041688.534369
[2026-03-22 23:35:11] 2026-03-22 22:34:39,233 | INFO     | chi2: 1.3525489637420678
[2026-03-22 23:35:11] 2026-03-22 22:34:39,233 | INFO     | current chi2=1.3525489637420678 (change=-0.00857022694627961 %)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,233 | INFO     | right removable region: 456
[2026-03-22 23:35:11] 2026-03-22 22:34:39,234 | INFO     | sum of square deviations: 30577524015.5
[2026-03-22 23:35:11] 2026-03-22 22:34:39,239 | INFO     | sum of deviations: -1760076401.4999657
[2026-03-22 23:35:11] 2026-03-22 22:34:39,239 | INFO     | mean x: 1774204804.5
[2026-03-22 23:35:11] 2026-03-22 22:34:39,239 | INFO     | mean y: 2344167.824675325
[2026-03-22 23:35:11] 2026-03-22 22:34:39,239 | INFO     | intersect: 104469376.07389031
[2026-03-22 23:35:11] 2026-03-22 22:34:39,240 | INFO     | chi2: 0.6921246647189946
[2026-03-22 23:35:11] 2026-03-22 22:34:39,240 | INFO     | current chi2=0.6921246647189946 (change=65.66468046332402 %)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,241 | INFO     | sum of square deviations: 29595449788.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,245 | INFO     | sum of deviations: -9777244700.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,246 | INFO     | mean x: 1774204957.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,246 | INFO     | mean y: 2345413.1794310724
[2026-03-22 23:35:11] 2026-03-22 22:34:39,246 | INFO     | intersect: 588477272.5294979
[2026-03-22 23:35:11] 2026-03-22 22:34:39,246 | INFO     | chi2: 0.6809801087377826
[2026-03-22 23:35:11] 2026-03-22 22:34:39,247 | INFO     | current chi2=0.6809801087377826 (change=1.6101948896354874 %)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,247 | INFO     | left removable region: 20
[2026-03-22 23:35:11] 2026-03-22 22:34:39,247 | INFO     | sum of square deviations: 25700146985.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,252 | INFO     | sum of deviations: 17816713897.0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,252 | INFO     | mean x: 1774204926.5
[2026-03-22 23:35:11] 2026-03-22 22:34:39,252 | INFO     | mean y: 2349010.362385321
[2026-03-22 23:35:11] 2026-03-22 22:34:39,252 | INFO     | intersect: -1227624560.9385111
[2026-03-22 23:35:11] 2026-03-22 22:34:39,253 | INFO     | chi2: 0.006069132720440882
[2026-03-22 23:35:11] 2026-03-22 22:34:39,253 | INFO     | current memory leak: 0.69 B/s (using 436 data points, chi2=0.01)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | could have reported an average CPU frequency of 2586 MHz (19 samples)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | ..............................
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . Timing measurements:
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . get job = 0 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . initial setup = 6 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . payload setup = 11 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . stage-in = 0 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . payload execution = 28434 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . stage-out = 1 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,254 | INFO     | . log creation = 0 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,255 | INFO     | ..............................
[2026-03-22 23:35:11] 2026-03-22 22:34:39,808 | INFO     | 
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | job summary report
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | --------------------------------------------------
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | PanDA job id: 7057341449
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | task id: 49180792
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | errors: (none)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | pilot state: finished 
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | transexitcode: 0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | exeerrorcode: 0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,809 | INFO     | exeerrordiag: 
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | exitcode: 0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | exitmsg: OK
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | cpuconsumptiontime: 108317 s
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | nevents: 400
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | neventsw: 0
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | pid: 358877
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | pgrp: 358877
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | corecount: 4
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | event service: False
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | sizes: {0: 2279244, 1: 2280373, 12: 2280373, 28449: 2318110, 28452: 2327130, 28454: 2327186, 28456: 2327508}
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | --------------------------------------------------
[2026-03-22 23:35:11] 2026-03-22 22:34:39,810 | INFO     | 
[2026-03-22 23:35:11] 2026-03-22 22:34:39,811 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-03-22 23:35:11] 2026-03-22 22:34:39,836 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,836 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | job 7057341449 has completed (purged errors)
[2026-03-22 23:35:11] 2026-03-22 22:34:39,838 | INFO     | overall cleanup function is called
[2026-03-22 23:35:11] 2026-03-22 22:34:40,846 | INFO     | --- collectZombieJob: --- 10, [358877]
[2026-03-22 23:35:11] 2026-03-22 22:34:40,847 | INFO     | zombie collector waiting for pid 358877
[2026-03-22 23:35:11] 2026-03-22 22:34:40,847 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-22 23:35:11] 2026-03-22 22:34:40,847 | INFO     | collected zombie processes
[2026-03-22 23:35:11] 2026-03-22 22:34:40,847 | INFO     | will attempt to kill all subprocesses of pid=358877
[2026-03-22 23:35:11] 2026-03-22 22:34:41,239 | INFO     | process IDs to be killed: [358877] (in reverse order)
[2026-03-22 23:35:11] 2026-03-22 22:34:41,372 | WARNING  | found no corresponding commands to process id(s)
[2026-03-22 23:35:11] 2026-03-22 22:34:41,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-22 23:35:11] 2026-03-22 22:34:41,385 | INFO     | did not find any defunct processes belonging to 358877
[2026-03-22 23:35:11] 2026-03-22 22:34:41,397 | INFO     | did not find any defunct processes belonging to 358877
[2026-03-22 23:35:11] 2026-03-22 22:34:41,398 | INFO     | ready for new job
[2026-03-22 23:35:11] 2026-03-22 22:34:41,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-22 23:35:11] 2026-03-22 22:34:41,401 | INFO     | **************************************
[2026-03-22 23:35:11] 2026-03-22 22:34:41,402 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-22 23:35:11] 2026-03-22 22:34:41,402 | INFO     | **************************************
[2026-03-22 23:35:11] 2026-03-22 22:34:41,402 | INFO     | 
[2026-03-22 23:35:11] 2026-03-22 22:34:41,406 | INFO     | architecture information:
[2026-03-22 23:35:11] 2026-03-22 22:34:41,406 | INFO     | executing command: cat /etc/os-release
[2026-03-22 23:35:11] 2026-03-22 22:34:41,424 | INFO     | cat /etc/os-release:
[2026-03-22 23:35:11] NAME="CentOS Linux"
[2026-03-22 23:35:11] VERSION="7 (Core)"
[2026-03-22 23:35:11] ID="centos"
[2026-03-22 23:35:11] ID_LIKE="rhel fedora"
[2026-03-22 23:35:11] VERSION_ID="7"
[2026-03-22 23:35:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-22 23:35:11] ANSI_COLOR="0;31"
[2026-03-22 23:35:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-22 23:35:11] HOME_URL="https://www.centos.org/"
[2026-03-22 23:35:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-22 23:35:11] 
[2026-03-22 23:35:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-22 23:35:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-22 23:35:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-22 23:35:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-22 23:35:11] 
[2026-03-22 23:35:11] 2026-03-22 22:34:41,424 | INFO     | **************************************
[2026-03-22 23:35:11] 2026-03-22 22:34:41,928 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-03-22 23:35:11] 2026-03-22 22:34:41,948 | INFO     | sufficient remaining disk space (35243687936 B)
[2026-03-22 23:35:11] 2026-03-22 22:34:41,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-22 23:35:11] 2026-03-22 22:34:41,948 | INFO     | current server update state: UPDATING_FINAL
[2026-03-22 23:35:11] 2026-03-22 22:34:41,949 | INFO     | update_server=False
[2026-03-22 23:35:11] 2026-03-22 22:34:41,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-22 23:35:11] 2026-03-22 22:34:42,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-22 23:35:11] 2026-03-22 22:34:42,375 | INFO     | aborting loop
[2026-03-22 23:35:11] 2026-03-22 22:34:42,493 | INFO     | all job control threads have been joined
[2026-03-22 23:35:11] 2026-03-22 22:34:42,896 | INFO     | all payload control threads have been joined
[2026-03-22 23:35:11] 2026-03-22 22:34:42,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-22 23:35:11] 2026-03-22 22:34:42,954 | INFO     | [job] retrieve thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:42,971 | INFO     | [job] create_data_payload thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:42,990 | INFO     | all data control threads have been joined
[2026-03-22 23:35:11] 2026-03-22 22:34:43,207 | INFO     | [payload] validate_pre thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,380 | INFO     | [job] job monitor thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-22 23:35:11] 2026-03-22 22:34:43,471 | INFO     | [payload] failed_post thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,498 | INFO     | [job] control thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,694 | INFO     | [data] copytool_in thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,694 | INFO     | [payload] execute_payloads thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,757 | INFO     | [job] validate thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,901 | INFO     | [payload] control thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:43,992 | INFO     | [data] control thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:44,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-22 23:35:11] 2026-03-22 22:34:44,415 | INFO     | [payload] validate_post thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:44,919 | INFO     | [data] copytool_out thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:45,364 | INFO     | [job] queue monitor thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:47,385 | INFO     | [data] queue_monitor thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:52,076 | INFO     | job.realtimelogging is not enabled
[2026-03-22 23:35:11] 2026-03-22 22:34:53,081 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-22 23:35:11] 2026-03-22 22:34:58,655 | INFO     | [monitor] cgroup control has ended
[2026-03-22 23:35:11] 2026-03-22 22:34:59,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22850299320128)>', '<ExcThread(monitor, started 22850055702272)>']
[2026-03-22 23:35:11] 2026-03-22 22:35:04,685 | INFO     | all workflow threads have been joined
[2026-03-22 23:35:11] 2026-03-22 22:35:04,685 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-22 23:35:11] 2026-03-22 22:35:04,686 | INFO     | traces error code: 0
[2026-03-22 23:35:11] 2026-03-22 22:35:04,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-22 23:35:11] 2026-03-22 22:35:11,391 | INFO     | PID=354059 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-22 23:35:11] 2026-03-22 22:35:11,391 | INFO     | .. there are 12 such processes running
[2026-03-22 23:35:11] 2026-03-22 22:35:11,392 | INFO     | found 0 job(s) in 20 queues
[2026-03-22 23:35:11] 2026-03-22 22:35:11,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-22 23:35:11] 2026-03-22 22:35:11,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-22 23:35:11] 2026-03-22 22:35:11,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-22 23:35:11] 2026-03-22 22:35:11,393 | CRITICAL | thread 'MainThread' is not alive
[2026-03-22 23:35:11] 2026-03-22 22:35:11,393 | INFO     | [monitor] control thread has ended
[2026-03-22 23:35:11] 2026-03-22 22:35:11,588 [wrapper] ==== pilot stdout END ====
[2026-03-22 23:35:11] 2026-03-22 22:35:11,592 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-22 23:35:11] 2026-03-22 22:35:11,594 [wrapper] pilotpid: 354059
[2026-03-22 23:35:11] 2026-03-22 22:35:11,597 [wrapper] Pilot exit status: 0
[2026-03-22 23:35:11] 2026-03-22 22:35:11,608 [wrapper] pandaids: 7057341449
[2026-03-22 23:35:11] 2026-03-22 22:35:11,686 [wrapper] cleanup supervisor_pilot  820016 354060
[2026-03-22 23:35:11] 2026-03-22 22:35:11,690 [wrapper] Test setup, not cleaning
[2026-03-22 23:35:11] 2026-03-22 22:35:11,694 [wrapper] apfmon messages muted
[2026-03-22 23:35:11] 2026-03-22 22:35:11,697 [wrapper] ==== wrapper stdout END ====
[2026-03-22 23:35:11] 2026-03-22 22:35:11,700 [wrapper] ==== wrapper stderr END ====
[2026-03-22 23:35:11]  *** Error codes and diagnostics ***
[2026-03-22 23:35:11]     "exeErrorCode": 0,
[2026-03-22 23:35:11]     "exeErrorDiag": "",
[2026-03-22 23:35:11]     "pilotErrorCode": 0,
[2026-03-22 23:35:11]     "pilotErrorDiag": "",
[2026-03-22 23:35:11]  *** Listing of results directory ***
[2026-03-22 23:35:11] total 472088
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc    585013 Mar 17 16:25 pilot3.tar.gz
[2026-03-22 23:35:11] -rwx------. 1 boinc boinc     36322 Mar 17 16:29 runpilot2-wrapper.sh
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc      5111 Mar 17 16:33 queuedata.json
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc       100 Mar 22 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-22 23:35:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 22 15:39 run_atlas
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc       105 Mar 22 15:39 job.xml
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc      6564 Mar 22 15:39 init_data.xml
[2026-03-22 23:35:11] -rw-r--r--. 2 boinc boinc 238920090 Mar 22 15:39 EVNT.49133897._000003.pool.root.1
[2026-03-22 23:35:11] -rw-r--r--. 2 boinc boinc     15845 Mar 22 15:39 start_atlas.sh
[2026-03-22 23:35:11] drwxrwx--x. 2 boinc boinc      4096 Mar 22 15:39 shared
[2026-03-22 23:35:11] -rw-r--r--. 2 boinc boinc    597544 Mar 22 15:39 input.tar.gz
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc         0 Mar 22 15:39 boinc_lockfile
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc      2641 Mar 22 15:39 pandaJob.out
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc   1010663 Mar 22 15:40 agis_schedconf.cvmfs.json
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc       452 Mar 22 15:40 workernode_map.json
[2026-03-22 23:35:11] drwx------. 5 boinc boinc      4096 Mar 22 15:40 pilot3
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc 231422983 Mar 22 23:33 HITS.49180792._000083.pool.root.1
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc       531 Mar 22 23:34 boinc_task_state.xml
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc      1034 Mar 22 23:34 memory_monitor_summary.json
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc   1511579 Mar 22 23:34 agis_ddmendpoints.agis.ALL.json
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc    596928 Mar 22 23:34 log.49180792._000083.job.log.tgz.1
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc      6396 Mar 22 23:34 heartbeat.json
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc      8192 Mar 22 23:35 boinc_mmap_file
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc        29 Mar 22 23:35 wrapper_checkpoint.txt
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc        95 Mar 22 23:35 pilot_heartbeat.json
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc       892 Mar 22 23:35 pilotlog.txt
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc   3972577 Mar 22 23:35 log.49180792._000083.job.log.1
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc       357 Mar 22 23:35 output.list
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc       620 Mar 22 23:35 runtime_log
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc   4587520 Mar 22 23:35 result.tar.gz
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc      9205 Mar 22 23:35 runtime_log.err
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc       668 Mar 22 23:35 eMqKDmkXlM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3c0LDmHa53Go.diag
[2026-03-22 23:35:11] -rw-r--r--. 1 boinc boinc     20867 Mar 22 23:35 stderr.txt
[2026-03-22 23:35:11] HITS file was successfully produced:
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc 231422983 Mar 22 23:33 shared/HITS.pool.root.1
[2026-03-22 23:35:11]  *** Contents of shared directory: ***
[2026-03-22 23:35:11] total 464412
[2026-03-22 23:35:11] -rw-r--r--. 2 boinc boinc 238920090 Mar 22 15:39 ATLAS.root_0
[2026-03-22 23:35:11] -rw-r--r--. 2 boinc boinc     15845 Mar 22 15:39 start_atlas.sh
[2026-03-22 23:35:11] -rw-r--r--. 2 boinc boinc    597544 Mar 22 15:39 input.tar.gz
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc 231422983 Mar 22 23:33 HITS.pool.root.1
[2026-03-22 23:35:11] -rw-------. 1 boinc boinc   4587520 Mar 22 23:35 result.tar.gz
23:35:13 (349454): run_atlas exited; CPU time 109613.622238
23:35:13 (349454): called boinc_finish(0)

</stderr_txt>
]]>

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