Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:26 (180263): wrapper (7.7.26015): starting
17:27:26 (180263): wrapper: running run_atlas (--nthreads 10)
[2026-03-17 17:27:26] Arguments: --nthreads 10
[2026-03-17 17:27:26] Threads: 10
[2026-03-17 17:27:26] Checking for CVMFS
[2026-03-17 17:27:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 17:27:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 17:27:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 17:27:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 17:27:26] 2.13.3.0 73771 113899 353908 157386 3 268 22589703 40960000 13781 16776704 0 187243003 99.539 227028649 34843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 17:27:26] CVMFS is ok
[2026-03-17 17:27:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 17:27:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 17:27:26] Further information can be found at the LHC@home message board.
[2026-03-17 17:27:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 17:27:26] Checking for apptainer binary...
[2026-03-17 17:27:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 17:27:26] Running /usr/bin/apptainer --version
[2026-03-17 17:27:26] apptainer version 1.4.5-2.el9
[2026-03-17 17:27:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 17:27:27] c-210-31-3.aglt2.org
[2026-03-17 17:27:27] apptainer works
[2026-03-17 17:27:27] Set ATHENA_PROC_NUMBER=10
[2026-03-17 17:27:27] Set ATHENA_CORE_NUMBER=10
[2026-03-17 17:27:27] Starting ATLAS job with PandaID=7057151141
[2026-03-17 17:27:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:12:14 (818201): wrapper (7.7.26015): starting
21:12:14 (818201): wrapper: running run_atlas (--nthreads 11)
[2026-03-17 21:12:14] Arguments: --nthreads 11
[2026-03-17 21:12:14] Threads: 11
[2026-03-17 21:12:14] This job has been restarted, cleaning up previous attempt
[2026-03-17 21:12:15] Checking for CVMFS
[2026-03-17 21:12:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 21:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 21:12:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 21:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 21:12:15] 2.13.3.0 73771 114124 374240 157394 2 735 34412926 40960001 11499 16776704 0 188272248 99.534 231664291 34909 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 21:12:15] CVMFS is ok
[2026-03-17 21:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 21:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 21:12:15] Further information can be found at the LHC@home message board.
[2026-03-17 21:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 21:12:15] Checking for apptainer binary...
[2026-03-17 21:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 21:12:15] Running /usr/bin/apptainer --version
[2026-03-17 21:12:15] apptainer version 1.4.5-2.el9
[2026-03-17 21:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 21:12:15] c-210-31-3.aglt2.org
[2026-03-17 21:12:15] apptainer works
[2026-03-17 21:12:15] Set ATHENA_PROC_NUMBER=11
[2026-03-17 21:12:15] Set ATHENA_CORE_NUMBER=11
[2026-03-17 21:12:15] Starting ATLAS job with PandaID=7057151141
[2026-03-17 21:12:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 06:29:54]  *** The last 200 lines of the pilot log: ***
[2026-03-18 06:29:54] 2026-03-18 10:29:18,262 | INFO     | log transfer has been attempted: DONE
[2026-03-18 06:29:54] 2026-03-18 10:29:18,262 | INFO     | job 7057151141 has finished - writing final server update
[2026-03-18 06:29:54] 2026-03-18 10:29:18,299 | INFO     | total number of processed events: 400 (read)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,334 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7057151141/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,335 | INFO     | extracted standard info from prmon json
[2026-03-18 06:29:54] 2026-03-18 10:29:18,335 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 06:29:54] 2026-03-18 10:29:18,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 06:29:54] 2026-03-18 10:29:18,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 06:29:54] 2026-03-18 10:29:18,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 06:29:54] 2026-03-18 10:29:18,343 | INFO     | fitting pss+swap vs Time
[2026-03-18 06:29:54] 2026-03-18 10:29:18,352 | INFO     | sum of square deviations: 51032343967.21875
[2026-03-18 06:29:54] 2026-03-18 10:29:18,376 | INFO     | sum of deviations: -21523438100.335808
[2026-03-18 06:29:54] 2026-03-18 10:29:18,385 | INFO     | mean x: 1773813053.8357663
[2026-03-18 06:29:54] 2026-03-18 10:29:18,385 | INFO     | mean y: 2626782.2518248176
[2026-03-18 06:29:54] 2026-03-18 10:29:18,385 | INFO     | intersect: 750751451.7815295
[2026-03-18 06:29:54] 2026-03-18 10:29:18,386 | INFO     | chi2: 5.008233231775241
[2026-03-18 06:29:54] 2026-03-18 10:29:18,386 | INFO     | sum of square deviations: 49648451904.909966
[2026-03-18 06:29:54] 2026-03-18 10:29:18,451 | INFO     | sum of deviations: 163716348250.291
[2026-03-18 06:29:54] 2026-03-18 10:29:18,452 | INFO     | mean x: 1773812901.3462248
[2026-03-18 06:29:54] 2026-03-18 10:29:18,452 | INFO     | mean y: 2647195.434622468
[2026-03-18 06:29:54] 2026-03-18 10:29:18,452 | INFO     | intersect: -5846521500.5773945
[2026-03-18 06:29:54] 2026-03-18 10:29:18,452 | INFO     | chi2: 1.3585793976173586
[2026-03-18 06:29:54] 2026-03-18 10:29:18,452 | INFO     | current chi2=1.3585793976173586 (change=72.87308049078636 %)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,453 | INFO     | sum of square deviations: 48289684252.804924
[2026-03-18 06:29:54] 2026-03-18 10:29:18,524 | INFO     | sum of deviations: 160573099652.18954
[2026-03-18 06:29:54] 2026-03-18 10:29:18,524 | INFO     | mean x: 1773812748.8494425
[2026-03-18 06:29:54] 2026-03-18 10:29:18,524 | INFO     | mean y: 2646842.6319702603
[2026-03-18 06:29:54] 2026-03-18 10:29:18,524 | INFO     | intersect: -5895644183.546805
[2026-03-18 06:29:54] 2026-03-18 10:29:18,525 | INFO     | chi2: 1.3586845261087832
[2026-03-18 06:29:54] 2026-03-18 10:29:18,525 | INFO     | current chi2=1.3586845261087832 (change=-0.00773811906827122 %)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,525 | INFO     | right removable region: 537
[2026-03-18 06:29:54] 2026-03-18 10:29:18,526 | INFO     | sum of square deviations: 49648038933.21572
[2026-03-18 06:29:54] 2026-03-18 10:29:18,537 | INFO     | sum of deviations: -107699750732.74588
[2026-03-18 06:29:54] 2026-03-18 10:29:18,537 | INFO     | mean x: 1773813206.3480663
[2026-03-18 06:29:54] 2026-03-18 10:29:18,537 | INFO     | mean y: 2636238.384898711
[2026-03-18 06:29:54] 2026-03-18 10:29:18,537 | INFO     | intersect: 3850507056.1450267
[2026-03-18 06:29:54] 2026-03-18 10:29:18,538 | INFO     | chi2: 3.696796006725011
[2026-03-18 06:29:54] 2026-03-18 10:29:18,538 | INFO     | current chi2=3.696796006725011 (change=26.185626035338856 %)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,538 | INFO     | sum of square deviations: 48289023067.26366
[2026-03-18 06:29:54] 2026-03-18 10:29:18,625 | INFO     | time since job start (33412s) is within the limit (345600.0s)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,626 | INFO     | sum of deviations: -114152574107.18958
[2026-03-18 06:29:54] 2026-03-18 10:29:18,626 | INFO     | mean x: 1773813358.858736
[2026-03-18 06:29:54] 2026-03-18 10:29:18,626 | INFO     | mean y: 2636960.221189591
[2026-03-18 06:29:54] 2026-03-18 10:29:18,626 | INFO     | intersect: 4195833426.784512
[2026-03-18 06:29:54] 2026-03-18 10:29:18,627 | INFO     | chi2: 3.6839894695196036
[2026-03-18 06:29:54] 2026-03-18 10:29:18,627 | INFO     | current chi2=3.6839894695196036 (change=0.3464226097980691 %)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,627 | INFO     | left removable region: 20
[2026-03-18 06:29:54] 2026-03-18 10:29:18,628 | INFO     | sum of square deviations: 42852487743.50473
[2026-03-18 06:29:54] 2026-03-18 10:29:18,671 | INFO     | sum of deviations: 59689833097.982574
[2026-03-18 06:29:54] 2026-03-18 10:29:18,671 | INFO     | mean x: 1773813328.3945842
[2026-03-18 06:29:54] 2026-03-18 10:29:18,671 | INFO     | mean y: 2658270.7794970986
[2026-03-18 06:29:54] 2026-03-18 10:29:18,671 | INFO     | intersect: -2468111271.2968082
[2026-03-18 06:29:54] 2026-03-18 10:29:18,709 | INFO     | chi2: 0.002758037953426468
[2026-03-18 06:29:54] 2026-03-18 10:29:18,710 | INFO     | current memory leak: 1.39 B/s (using 517 data points, chi2=0.00)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,726 | INFO     | could have reported an average CPU frequency of 3004 MHz (22 samples)
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | ..............................
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . Timing measurements:
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . get job = 0 s
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . initial setup = 2 s
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . payload setup = 6 s
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . stage-in = 0 s
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . payload execution = 33378 s
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . stage-out = 6 s
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | . log creation = 1 s
[2026-03-18 06:29:54] 2026-03-18 10:29:18,727 | INFO     | ..............................
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | 
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | job summary report
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | --------------------------------------------------
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | PanDA job id: 7057151141
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | task id: 49176793
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | errors: (none)
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | pilot state: finished 
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | transexitcode: 0
[2026-03-18 06:29:54] 2026-03-18 10:29:19,328 | INFO     | exeerrorcode: 0
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | exeerrordiag: 
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | exitcode: 0
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | exitmsg: OK
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | cpuconsumptiontime: 90358 s
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | nevents: 400
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | neventsw: 0
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | pid: 830806
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | pgrp: 830806
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | corecount: 11
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | event service: False
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | sizes: {0: 2280103, 1: 2280337, 11: 2280337, 33389: 2319982, 33390: 2319981, 33398: 2329035, 33400: 2329219, 33402: 2329413}
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | --------------------------------------------------
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | 
[2026-03-18 06:29:54] 2026-03-18 10:29:19,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-18 06:29:54] 2026-03-18 10:29:19,605 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,605 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,605 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,607 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 06:29:54] 2026-03-18 10:29:19,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,607 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 06:29:54] 2026-03-18 10:29:19,607 | INFO     | job 7057151141 has completed (purged errors)
[2026-03-18 06:29:54] 2026-03-18 10:29:19,607 | INFO     | overall cleanup function is called
[2026-03-18 06:29:54] 2026-03-18 10:29:20,629 | INFO     | --- collectZombieJob: --- 10, [830806]
[2026-03-18 06:29:54] 2026-03-18 10:29:20,629 | INFO     | zombie collector waiting for pid 830806
[2026-03-18 06:29:54] 2026-03-18 10:29:20,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 06:29:54] 2026-03-18 10:29:20,629 | INFO     | collected zombie processes
[2026-03-18 06:29:54] 2026-03-18 10:29:20,629 | INFO     | will attempt to kill all subprocesses of pid=830806
[2026-03-18 06:29:54] 2026-03-18 10:29:22,142 | INFO     | process IDs to be killed: [830806] (in reverse order)
[2026-03-18 06:29:54] 2026-03-18 10:29:23,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 06:29:54] 2026-03-18 10:29:23,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 06:29:54] 2026-03-18 10:29:23,754 | INFO     | did not find any defunct processes belonging to 830806
[2026-03-18 06:29:54] 2026-03-18 10:29:23,836 | INFO     | did not find any defunct processes belonging to 830806
[2026-03-18 06:29:54] 2026-03-18 10:29:23,836 | INFO     | ready for new job
[2026-03-18 06:29:54] 2026-03-18 10:29:23,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 06:29:54] 2026-03-18 10:29:23,875 | INFO     | **************************************
[2026-03-18 06:29:54] 2026-03-18 10:29:23,875 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 06:29:54] 2026-03-18 10:29:23,875 | INFO     | **************************************
[2026-03-18 06:29:54] 2026-03-18 10:29:23,875 | INFO     | 
[2026-03-18 06:29:54] 2026-03-18 10:29:23,914 | INFO     | architecture information:
[2026-03-18 06:29:54] 2026-03-18 10:29:23,932 | INFO     | executing command: cat /etc/os-release
[2026-03-18 06:29:54] 2026-03-18 10:29:24,047 | INFO     | cat /etc/os-release:
[2026-03-18 06:29:54] NAME="CentOS Linux"
[2026-03-18 06:29:54] VERSION="7 (Core)"
[2026-03-18 06:29:54] ID="centos"
[2026-03-18 06:29:54] ID_LIKE="rhel fedora"
[2026-03-18 06:29:54] VERSION_ID="7"
[2026-03-18 06:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 06:29:54] ANSI_COLOR="0;31"
[2026-03-18 06:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 06:29:54] HOME_URL="https://www.centos.org/"
[2026-03-18 06:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 06:29:54] 
[2026-03-18 06:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 06:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 06:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 06:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 06:29:54] 
[2026-03-18 06:29:54] 2026-03-18 10:29:24,048 | INFO     | **************************************
[2026-03-18 06:29:54] 2026-03-18 10:29:24,551 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-18 06:29:54] 2026-03-18 10:29:24,590 | INFO     | sufficient remaining disk space (72985083904 B)
[2026-03-18 06:29:54] 2026-03-18 10:29:24,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 06:29:54] 2026-03-18 10:29:24,591 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 06:29:54] 2026-03-18 10:29:24,591 | INFO     | update_server=False
[2026-03-18 06:29:54] 2026-03-18 10:29:24,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 06:29:54] 2026-03-18 10:29:24,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:29:54] 2026-03-18 10:29:24,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 06:29:54] 2026-03-18 10:29:24,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 06:29:54] 2026-03-18 10:29:24,679 | INFO     | all data control threads have been joined
[2026-03-18 06:29:54] 2026-03-18 10:29:25,029 | INFO     | all payload control threads have been joined
[2026-03-18 06:29:54] 2026-03-18 10:29:25,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:29:54] 2026-03-18 10:29:25,353 | INFO     | aborting loop
[2026-03-18 06:29:54] 2026-03-18 10:29:25,598 | INFO     | [job] retrieve thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:25,601 | INFO     | [job] queue monitor thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:25,685 | INFO     | [data] control thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:25,740 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:25,917 | INFO     | [job] validate thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:25,922 | INFO     | [data] copytool_in thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:25,938 | INFO     | all job control threads have been joined
[2026-03-18 06:29:54] 2026-03-18 10:29:25,984 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:26,035 | INFO     | [payload] control thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:26,358 | INFO     | [job] job monitor thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:26,602 | INFO     | [data] copytool_out thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:26,843 | INFO     | [payload] failed_post thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:26,944 | INFO     | [job] control thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:26,973 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:27,035 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:27,097 | INFO     | [payload] validate_post thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:27,753 | INFO     | [monitor] cgroup control has ended
[2026-03-18 06:29:54] 2026-03-18 10:29:28,604 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 06:29:54] 2026-03-18 10:29:30,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400874772288)>', '<ExcThread(monitor, started 140400517961472)>']
[2026-03-18 06:29:54] 2026-03-18 10:29:35,085 | INFO     | all workflow threads have been joined
[2026-03-18 06:29:54] 2026-03-18 10:29:35,085 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 06:29:54] 2026-03-18 10:29:35,085 | INFO     | traces error code: 0
[2026-03-18 06:29:54] 2026-03-18 10:29:35,085 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 06:29:54] 2026-03-18 10:29:52,294 | INFO     | PID=825879 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-18 06:29:54] 2026-03-18 10:29:52,294 | INFO     | .. there are 18 such processes running
[2026-03-18 06:29:54] 2026-03-18 10:29:52,295 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 06:29:54] 2026-03-18 10:29:52,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 06:29:54] 2026-03-18 10:29:52,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 06:29:54] 2026-03-18 10:29:52,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 06:29:54] 2026-03-18 10:29:52,295 | INFO     | [monitor] control thread has ended
[2026-03-18 06:29:54] 2026-03-18 10:29:52,482 [wrapper] ==== pilot stdout END ====
[2026-03-18 06:29:54] 2026-03-18 10:29:52,497 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 06:29:54] 2026-03-18 10:29:52,546 [wrapper] pilotpid: 825879
[2026-03-18 06:29:54] 2026-03-18 10:29:52,604 [wrapper] Pilot exit status: 0
[2026-03-18 06:29:54] 2026-03-18 10:29:52,826 [wrapper] pandaids: 7057151141 7057151141
[2026-03-18 06:29:54] 2026-03-18 10:29:53,021 [wrapper] cleanup supervisor_pilot 1914580 825880
[2026-03-18 06:29:54] 2026-03-18 10:29:53,047 [wrapper] Test setup, not cleaning
[2026-03-18 06:29:54] 2026-03-18 10:29:53,087 [wrapper] apfmon messages muted
[2026-03-18 06:29:54] 2026-03-18 10:29:53,126 [wrapper] ==== wrapper stdout END ====
[2026-03-18 06:29:54] 2026-03-18 10:29:53,168 [wrapper] ==== wrapper stderr END ====
[2026-03-18 06:29:54]  *** Error codes and diagnostics ***
[2026-03-18 06:29:54]     "exeErrorCode": 0,
[2026-03-18 06:29:54]     "exeErrorDiag": "",
[2026-03-18 06:29:54]     "pilotErrorCode": 0,
[2026-03-18 06:29:54]     "pilotErrorDiag": "",
[2026-03-18 06:29:54]  *** Listing of results directory ***
[2026-03-18 06:29:54] total 702304
[2026-03-18 06:29:54] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas    585013 Mar 17 05:43 pilot3.tar.gz
[2026-03-18 06:29:54] -rwx------. 1 boincer umatlas     36322 Mar 17 05:44 runpilot2-wrapper.sh
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas      5111 Mar 17 05:44 queuedata.json
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas       100 Mar 17 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 06:29:54] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 17 17:27 run_atlas
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas       105 Mar 17 17:27 job.xml
[2026-03-18 06:29:54] -rw-r--r--. 3 boincer umatlas 239261999 Mar 17 17:27 EVNT.49135257._000006.pool.root.1
[2026-03-18 06:29:54] -rw-r--r--. 3 boincer umatlas 239261999 Mar 17 17:27 ATLAS.root_0
[2026-03-18 06:29:54] drwxrwx--x. 2 boincer umatlas      4096 Mar 17 17:27 shared
[2026-03-18 06:29:54] -rw-r--r--. 2 boincer umatlas    597532 Mar 17 17:27 input.tar.gz
[2026-03-18 06:29:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 17:27 start_atlas.sh
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas         0 Mar 17 17:27 boinc_lockfile
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas      2620 Mar 17 21:12 pandaJob.out
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas        57 Mar 17 21:12 setup.sh.local
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas   1011515 Mar 17 21:12 agis_schedconf.cvmfs.json
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas       443 Mar 17 21:12 workernode_map.json
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas      6843 Mar 18 06:18 init_data.xml
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas 226803619 Mar 18 06:24 HITS.49176793._000139.pool.root.1
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas       531 Mar 18 06:24 boinc_task_state.xml
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas      1055 Mar 18 06:29 memory_monitor_summary.json
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas   1511579 Mar 18 06:29 agis_ddmendpoints.agis.ALL.json
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas    746476 Mar 18 06:29 log.49176793._000139.job.log.tgz.1
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas      6412 Mar 18 06:29 heartbeat.json
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas       822 Mar 18 06:29 pilotlog.txt
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas        96 Mar 18 06:29 pilot_heartbeat.json
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 06:29 boinc_mmap_file
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas   4197553 Mar 18 06:29 log.49176793._000139.job.log.1
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas       357 Mar 18 06:29 output.list
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas       620 Mar 18 06:29 runtime_log
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas   4966400 Mar 18 06:29 result.tar.gz
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas      9439 Mar 18 06:29 runtime_log.err
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas       789 Mar 18 06:29 eZ1MDmF9fM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYxwLDmBrHmUn.diag
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas        29 Mar 18 06:29 wrapper_checkpoint.txt
[2026-03-18 06:29:54] -rw-r--r--. 1 boincer umatlas     23325 Mar 18 06:29 stderr.txt
[2026-03-18 06:29:54] HITS file was successfully produced:
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas 226803619 Mar 18 06:24 shared/HITS.pool.root.1
[2026-03-18 06:29:54]  *** Contents of shared directory: ***
[2026-03-18 06:29:54] total 460600
[2026-03-18 06:29:54] -rw-r--r--. 3 boincer umatlas 239261999 Mar 17 17:27 ATLAS.root_0
[2026-03-18 06:29:54] -rw-r--r--. 2 boincer umatlas    597532 Mar 17 17:27 input.tar.gz
[2026-03-18 06:29:54] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 17:27 start_atlas.sh
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas 226803619 Mar 18 06:24 HITS.pool.root.1
[2026-03-18 06:29:54] -rw-------. 1 boincer umatlas   4966400 Mar 18 06:29 result.tar.gz
06:29:56 (818201): run_atlas exited; CPU time 91194.885389
06:29:56 (818201): called boinc_finish(0)

</stderr_txt>
]]>

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