Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:42:23 (14757): wrapper (7.7.26015): starting
10:42:23 (14757): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 10:42:23] Arguments: --nthreads 8
[2026-03-17 10:42:23] Threads: 8
[2026-03-17 10:42:23] Checking for CVMFS
[2026-03-17 10:42:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 10:42:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 10:42:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 10:42:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 10:42:24] 2.11.2.0 2990 69231 76348 157374 3 52 11542337 20275200 1 130560 0 20067680 99.927 3802541 23839 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 10:42:24] CVMFS is ok
[2026-03-17 10:42:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 10:42:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 10:42:24] Further information can be found at the LHC@home message board.
[2026-03-17 10:42:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 10:42:24] Checking for apptainer binary...
[2026-03-17 10:42:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 10:42:24] Running /usr/bin/apptainer --version
[2026-03-17 10:42:24] apptainer version 1.3.2-1.el7
[2026-03-17 10:42:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 10:42:26] c-204-25.aglt2.org
[2026-03-17 10:42:26] apptainer works
[2026-03-17 10:42:26] Set ATHENA_PROC_NUMBER=8
[2026-03-17 10:42:26] Set ATHENA_CORE_NUMBER=8
[2026-03-17 10:42:26] Starting ATLAS job with PandaID=7057143136
[2026-03-17 10:42:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 14:37:41]  *** The last 200 lines of the pilot log: ***
[2026-03-17 14:37:41] 2026-03-17 18:37:09,240 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 14:37:41] 2026-03-17 18:37:09,241 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 14:37:41] 2026-03-17 18:37:09,241 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 14:37:41] 2026-03-17 18:37:09,241 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 14:37:41] 2026-03-17 18:37:09,245 | INFO     | fitting pss+swap vs Time
[2026-03-17 14:37:41] 2026-03-17 18:37:09,245 | INFO     | sum of square deviations: 3772712597.5
[2026-03-17 14:37:41] 2026-03-17 18:37:09,247 | INFO     | sum of deviations: 18904865812.999996
[2026-03-17 14:37:41] 2026-03-17 18:37:09,247 | INFO     | mean x: 1773765581.5
[2026-03-17 14:37:41] 2026-03-17 18:37:09,247 | INFO     | mean y: 2524734.6260869564
[2026-03-17 14:37:41] 2026-03-17 18:37:09,247 | INFO     | intersect: -8885721967.28172
[2026-03-17 14:37:41] 2026-03-17 18:37:09,248 | INFO     | chi2: 1.5954168250907206
[2026-03-17 14:37:41] 2026-03-17 18:37:09,248 | INFO     | sum of square deviations: 3531973200.0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,250 | INFO     | sum of deviations: 18394585685.000004
[2026-03-17 14:37:41] 2026-03-17 18:37:09,250 | INFO     | mean x: 1773765429.0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,250 | INFO     | mean y: 2524411.3333333335
[2026-03-17 14:37:41] 2026-03-17 18:37:09,250 | INFO     | intersect: -9235280725.13579
[2026-03-17 14:37:41] 2026-03-17 18:37:09,251 | INFO     | chi2: 1.5961862283019348
[2026-03-17 14:37:41] 2026-03-17 18:37:09,251 | INFO     | current chi2=1.5961862283019348 (change=-0.0482258428715307 %)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,251 | INFO     | right removable region: 224
[2026-03-17 14:37:41] 2026-03-17 18:37:09,251 | INFO     | sum of square deviations: 3531973200.0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,253 | INFO     | sum of deviations: -17084364916.000006
[2026-03-17 14:37:41] 2026-03-17 18:37:09,253 | INFO     | mean x: 1773765734.0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,253 | INFO     | mean y: 2547314.2666666666
[2026-03-17 14:37:41] 2026-03-17 18:37:09,253 | INFO     | intersect: 8582357907.153554
[2026-03-17 14:37:41] 2026-03-17 18:37:09,254 | INFO     | chi2: 0.12941410875577647
[2026-03-17 14:37:41] 2026-03-17 18:37:09,254 | INFO     | current chi2=0.12941410875577647 (change=91.88838260193116 %)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,254 | INFO     | sum of square deviations: 3301699115.0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,256 | INFO     | sum of deviations: -14894672803.999994
[2026-03-17 14:37:41] 2026-03-17 18:37:09,256 | INFO     | mean x: 1773765886.5
[2026-03-17 14:37:41] 2026-03-17 18:37:09,256 | INFO     | mean y: 2545824.8
[2026-03-17 14:37:41] 2026-03-17 18:37:09,256 | INFO     | intersect: 8004384148.070256
[2026-03-17 14:37:41] 2026-03-17 18:37:09,256 | INFO     | chi2: 0.11114017561373404
[2026-03-17 14:37:41] 2026-03-17 18:37:09,256 | INFO     | current chi2=0.11114017561373404 (change=14.120510752446656 %)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,257 | INFO     | left removable region: 20
[2026-03-17 14:37:41] 2026-03-17 18:37:09,257 | INFO     | sum of square deviations: 2632440055.0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,258 | INFO     | sum of deviations: 391932076.00000024
[2026-03-17 14:37:41] 2026-03-17 18:37:09,259 | INFO     | mean x: 1773766008.5
[2026-03-17 14:37:41] 2026-03-17 18:37:09,259 | INFO     | mean y: 2534711.0588235296
[2026-03-17 14:37:41] 2026-03-17 18:37:09,259 | INFO     | intersect: -261553275.571375
[2026-03-17 14:37:41] 2026-03-17 18:37:09,259 | INFO     | chi2: 0.03788663615559469
[2026-03-17 14:37:41] 2026-03-17 18:37:09,259 | INFO     | current memory leak: 0.15 B/s (using 204 data points, chi2=0.04)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,260 | INFO     | could have reported an average CPU frequency of 1779 MHz (11 samples)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,260 | INFO     | ..............................
[2026-03-17 14:37:41] 2026-03-17 18:37:09,260 | INFO     | . Timing measurements:
[2026-03-17 14:37:41] 2026-03-17 18:37:09,260 | INFO     | . get job = 0 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,260 | INFO     | . initial setup = 8 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,260 | INFO     | . payload setup = 8 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,260 | INFO     | . stage-in = 0 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,261 | INFO     | . payload execution = 14031 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,261 | INFO     | . stage-out = 2 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,261 | INFO     | . log creation = 0 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,261 | INFO     | ..............................
[2026-03-17 14:37:41] 2026-03-17 18:37:09,354 | INFO     | 
[2026-03-17 14:37:41] 2026-03-17 18:37:09,354 | INFO     | job summary report
[2026-03-17 14:37:41] 2026-03-17 18:37:09,355 | INFO     | --------------------------------------------------
[2026-03-17 14:37:41] 2026-03-17 18:37:09,355 | INFO     | PanDA job id: 7057143136
[2026-03-17 14:37:41] 2026-03-17 18:37:09,355 | INFO     | task id: 49190732
[2026-03-17 14:37:41] 2026-03-17 18:37:09,355 | INFO     | errors: (none)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,355 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 14:37:41] 2026-03-17 18:37:09,355 | INFO     | pilot state: finished 
[2026-03-17 14:37:41] 2026-03-17 18:37:09,355 | INFO     | transexitcode: 0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,356 | INFO     | exeerrorcode: 0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,356 | INFO     | exeerrordiag: 
[2026-03-17 14:37:41] 2026-03-17 18:37:09,356 | INFO     | exitcode: 0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,356 | INFO     | exitmsg: OK
[2026-03-17 14:37:41] 2026-03-17 18:37:09,356 | INFO     | cpuconsumptiontime: 106929 s
[2026-03-17 14:37:41] 2026-03-17 18:37:09,357 | INFO     | nevents: 400
[2026-03-17 14:37:41] 2026-03-17 18:37:09,357 | INFO     | neventsw: 0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,357 | INFO     | pid: 23213
[2026-03-17 14:37:41] 2026-03-17 18:37:09,357 | INFO     | pgrp: 23213
[2026-03-17 14:37:41] 2026-03-17 18:37:09,357 | INFO     | corecount: 8
[2026-03-17 14:37:41] 2026-03-17 18:37:09,357 | INFO     | event service: False
[2026-03-17 14:37:41] 2026-03-17 18:37:09,358 | INFO     | sizes: {0: 2279842, 1: 2280303, 11: 2280303, 14043: 2310961, 14044: 2310960, 14046: 2320014, 14047: 2320392}
[2026-03-17 14:37:41] 2026-03-17 18:37:09,358 | INFO     | --------------------------------------------------
[2026-03-17 14:37:41] 2026-03-17 18:37:09,358 | INFO     | 
[2026-03-17 14:37:41] 2026-03-17 18:37:09,358 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-17 14:37:41] 2026-03-17 18:37:09,389 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,389 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,389 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,390 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,392 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,393 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 14:37:41] 2026-03-17 18:37:09,393 | INFO     | job 7057143136 has completed (purged errors)
[2026-03-17 14:37:41] 2026-03-17 18:37:09,393 | INFO     | overall cleanup function is called
[2026-03-17 14:37:41] 2026-03-17 18:37:10,401 | INFO     | --- collectZombieJob: --- 10, [23213]
[2026-03-17 14:37:41] 2026-03-17 18:37:10,402 | INFO     | zombie collector waiting for pid 23213
[2026-03-17 14:37:41] 2026-03-17 18:37:10,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 14:37:41] 2026-03-17 18:37:10,402 | INFO     | collected zombie processes
[2026-03-17 14:37:41] 2026-03-17 18:37:10,402 | INFO     | will attempt to kill all subprocesses of pid=23213
[2026-03-17 14:37:41] 2026-03-17 18:37:10,494 | INFO     | process IDs to be killed: [23213] (in reverse order)
[2026-03-17 14:37:41] 2026-03-17 18:37:10,552 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 14:37:41] 2026-03-17 18:37:10,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 14:37:41] 2026-03-17 18:37:10,556 | INFO     | did not find any defunct processes belonging to 23213
[2026-03-17 14:37:41] 2026-03-17 18:37:10,559 | INFO     | did not find any defunct processes belonging to 23213
[2026-03-17 14:37:41] 2026-03-17 18:37:10,559 | INFO     | ready for new job
[2026-03-17 14:37:41] 2026-03-17 18:37:10,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 14:37:41] 2026-03-17 18:37:10,561 | INFO     | **************************************
[2026-03-17 14:37:41] 2026-03-17 18:37:10,561 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 14:37:41] 2026-03-17 18:37:10,561 | INFO     | **************************************
[2026-03-17 14:37:41] 2026-03-17 18:37:10,561 | INFO     | 
[2026-03-17 14:37:41] 2026-03-17 18:37:10,562 | INFO     | architecture information:
[2026-03-17 14:37:41] 2026-03-17 18:37:10,562 | INFO     | executing command: cat /etc/os-release
[2026-03-17 14:37:41] 2026-03-17 18:37:10,582 | INFO     | cat /etc/os-release:
[2026-03-17 14:37:41] NAME="CentOS Linux"
[2026-03-17 14:37:41] VERSION="7 (Core)"
[2026-03-17 14:37:41] ID="centos"
[2026-03-17 14:37:41] ID_LIKE="rhel fedora"
[2026-03-17 14:37:41] VERSION_ID="7"
[2026-03-17 14:37:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 14:37:41] ANSI_COLOR="0;31"
[2026-03-17 14:37:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 14:37:41] HOME_URL="https://www.centos.org/"
[2026-03-17 14:37:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 14:37:41] 
[2026-03-17 14:37:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 14:37:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 14:37:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 14:37:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 14:37:41] 
[2026-03-17 14:37:41] 2026-03-17 18:37:10,583 | INFO     | **************************************
[2026-03-17 14:37:41] 2026-03-17 18:37:11,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-17 14:37:41] 2026-03-17 18:37:11,106 | INFO     | sufficient remaining disk space (18433966080 B)
[2026-03-17 14:37:41] 2026-03-17 18:37:11,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 14:37:41] 2026-03-17 18:37:11,107 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 14:37:41] 2026-03-17 18:37:11,107 | INFO     | update_server=False
[2026-03-17 14:37:41] 2026-03-17 18:37:11,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 14:37:41] 2026-03-17 18:37:11,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 14:37:41] 2026-03-17 18:37:11,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 14:37:41] 2026-03-17 18:37:11,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:37:41] 2026-03-17 18:37:11,815 | WARNING  | process 23213 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 14:37:41] 2026-03-17 18:37:11,889 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 14:37:41] 2026-03-17 18:37:11,890 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 14:37:41] 2026-03-17 18:37:11,891 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-17 14:37:41] 2026-03-17 18:37:11,891 | WARNING  | maxPSS not found in memory monitor output
[2026-03-17 14:37:41] 2026-03-17 18:37:11,891 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7057143136/payload.stdout) since it has not been created yet
[2026-03-17 14:37:41] 2026-03-17 18:37:11,891 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-17 14:37:41] 2026-03-17 18:37:11,910 | INFO     | sufficient remaining disk space (18433966080 B)
[2026-03-17 14:37:41] 2026-03-17 18:37:11,911 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-17 14:37:41] 2026-03-17 18:37:11,911 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7057143136/HITS.49190732._000006.pool.root.1 since it does not exist
[2026-03-17 14:37:41] 2026-03-17 18:37:12,004 | INFO     | number of running child processes to parent process 23213: 1
[2026-03-17 14:37:41] 2026-03-17 18:37:12,005 | INFO     | maximum number of monitored processes: 6
[2026-03-17 14:37:41] 2026-03-17 18:37:12,005 | INFO     | aborting job monitoring since job object (job id=7057143136) has expired
[2026-03-17 14:37:41] 2026-03-17 18:37:12,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:37:41] 2026-03-17 18:37:12,005 | INFO     | will abort loop
[2026-03-17 14:37:41] 2026-03-17 18:37:12,046 | INFO     | all payload control threads have been joined
[2026-03-17 14:37:41] 2026-03-17 18:37:12,095 | INFO     | all data control threads have been joined
[2026-03-17 14:37:41] 2026-03-17 18:37:12,114 | INFO     | [job] retrieve thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:12,115 | INFO     | [job] queue monitor thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:12,205 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:12,274 | INFO     | [job] validate thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:12,281 | INFO     | [data] copytool_in thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:12,574 | INFO     | all job control threads have been joined
[2026-03-17 14:37:41] 2026-03-17 18:37:12,644 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:12,797 | INFO     | [payload] failed_post thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:12,884 | INFO     | [payload] validate_post thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:13,011 | INFO     | [job] job monitor thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:13,046 | INFO     | [payload] control thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:13,102 | INFO     | [data] control thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:13,102 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:13,113 | INFO     | [data] copytool_out thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:13,315 | INFO     | [monitor] cgroup control has ended
[2026-03-17 14:37:41] 2026-03-17 18:37:13,579 | INFO     | [job] control thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:15,114 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:21,962 | INFO     | job.realtimelogging is not enabled
[2026-03-17 14:37:41] 2026-03-17 18:37:22,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 14:37:41] 2026-03-17 18:37:25,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694246864704)>', '<ExcThread(monitor, started 140693557192448)>']
[2026-03-17 14:37:41] 2026-03-17 18:37:30,039 | INFO     | all workflow threads have been joined
[2026-03-17 14:37:41] 2026-03-17 18:37:30,039 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 14:37:41] 2026-03-17 18:37:30,040 | INFO     | traces error code: 0
[2026-03-17 14:37:41] 2026-03-17 18:37:30,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 14:37:41] 2026-03-17 18:37:41,535 | INFO     | PID=18741 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-17 14:37:41] 2026-03-17 18:37:41,536 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 14:37:41] 2026-03-17 18:37:41,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 14:37:41] 2026-03-17 18:37:41,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 14:37:41] 2026-03-17 18:37:41,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 14:37:41] 2026-03-17 18:37:41,536 | INFO     | [monitor] control thread has ended
[2026-03-17 14:37:41] 2026-03-17 18:37:41,655 [wrapper] ==== pilot stdout END ====
[2026-03-17 14:37:41] 2026-03-17 18:37:41,660 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 14:37:41] 2026-03-17 18:37:41,665 [wrapper] pilotpid: 18741
[2026-03-17 14:37:41] 2026-03-17 18:37:41,669 [wrapper] Pilot exit status: 0
[2026-03-17 14:37:41] 2026-03-17 18:37:41,688 [wrapper] pandaids: 7057143136
[2026-03-17 14:37:41] 2026-03-17 18:37:41,735 [wrapper] cleanup supervisor_pilot 12869 18742
[2026-03-17 14:37:41] 2026-03-17 18:37:41,739 [wrapper] Test setup, not cleaning
[2026-03-17 14:37:41] 2026-03-17 18:37:41,744 [wrapper] apfmon messages muted
[2026-03-17 14:37:41] 2026-03-17 18:37:41,748 [wrapper] ==== wrapper stdout END ====
[2026-03-17 14:37:41] 2026-03-17 18:37:41,753 [wrapper] ==== wrapper stderr END ====
[2026-03-17 14:37:41]  *** Error codes and diagnostics ***
[2026-03-17 14:37:41]     "exeErrorCode": 0,
[2026-03-17 14:37:41]     "exeErrorDiag": "",
[2026-03-17 14:37:41]     "pilotErrorCode": 0,
[2026-03-17 14:37:41]     "pilotErrorDiag": "",
[2026-03-17 14:37:41]  *** Listing of results directory ***
[2026-03-17 14:37:41] total 467688
[2026-03-17 14:37:41] -rwx------ 1 boincer umatlas     36322 Mar 17 02:06 runpilot2-wrapper.sh
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas    585013 Mar 17 02:08 pilot3.tar.gz
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas      5111 Mar 17 02:08 queuedata.json
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas       100 Mar 17 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 14:37:41] -rwxr-xr-x 1 boincer umatlas      7986 Mar 17 10:42 run_atlas
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas       105 Mar 17 10:42 job.xml
[2026-03-17 14:37:41] -rw-r--r-- 2 boincer umatlas 252966670 Mar 17 10:42 EVNT.49124444._000001.pool.root.1
[2026-03-17 14:37:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 10:42 start_atlas.sh
[2026-03-17 14:37:41] drwxrwx--x 2 boincer umatlas      4096 Mar 17 10:42 shared
[2026-03-17 14:37:41] -rw-r--r-- 2 boincer umatlas    597528 Mar 17 10:42 input.tar.gz
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas         0 Mar 17 10:42 boinc_lockfile
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas      2597 Mar 17 10:42 pandaJob.out
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas        57 Mar 17 10:42 setup.sh.local
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas   1010282 Mar 17 10:42 agis_schedconf.cvmfs.json
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas       431 Mar 17 10:42 workernode_map.json
[2026-03-17 14:37:41] drwx------ 5 boincer umatlas      4096 Mar 17 10:42 pilot3
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas      5912 Mar 17 14:30 init_data.xml
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas 217219635 Mar 17 14:36 HITS.49190732._000006.pool.root.1
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas       531 Mar 17 14:36 boinc_task_state.xml
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas      1050 Mar 17 14:37 memory_monitor_summary.json
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas   1511579 Mar 17 14:37 agis_ddmendpoints.agis.ALL.json
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas    447074 Mar 17 14:37 log.49190732._000006.job.log.tgz.1
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas      6391 Mar 17 14:37 heartbeat.json
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas        95 Mar 17 14:37 pilot_heartbeat.json
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas        29 Mar 17 14:37 wrapper_checkpoint.txt
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas      8192 Mar 17 14:37 boinc_mmap_file
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas       745 Mar 17 14:37 pilotlog.txt
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas   1945605 Mar 17 14:37 log.49190732._000006.job.log.1
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas       357 Mar 17 14:37 output.list
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas       620 Mar 17 14:37 runtime_log
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas   2406400 Mar 17 14:37 result.tar.gz
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas       663 Mar 17 14:37 Rw2LDmckcM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmctzLDmWWqdbn.diag
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas      9342 Mar 17 14:37 runtime_log.err
[2026-03-17 14:37:41] -rw-r--r-- 1 boincer umatlas     21438 Mar 17 14:37 stderr.txt
[2026-03-17 14:37:41] HITS file was successfully produced:
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas 217219635 Mar 17 14:36 shared/HITS.pool.root.1
[2026-03-17 14:37:41]  *** Contents of shared directory: ***
[2026-03-17 14:37:41] total 462128
[2026-03-17 14:37:41] -rw-r--r-- 2 boincer umatlas 252966670 Mar 17 10:42 ATLAS.root_0
[2026-03-17 14:37:41] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 10:42 start_atlas.sh
[2026-03-17 14:37:41] -rw-r--r-- 2 boincer umatlas    597528 Mar 17 10:42 input.tar.gz
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas 217219635 Mar 17 14:36 HITS.pool.root.1
[2026-03-17 14:37:41] -rw------- 1 boincer umatlas   2406400 Mar 17 14:37 result.tar.gz
14:37:43 (14757): run_atlas exited; CPU time 106886.931541
14:37:43 (14757): called boinc_finish(0)

</stderr_txt>
]]>

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