Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-17 16:15:02 (54627): vboxwrapper version 26210
2026-03-17 16:15:02 (54627): BOINC client version: 8.2.5
2026-03-17 16:15:04 (54627): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2026-03-17 16:15:04 (54627): Detected: Sandbox Configuration Enabled
2026-03-17 16:15:04 (54627): Successfully copied 'init_data.xml' to the shared directory.
2026-03-17 16:15:04 (54627): Create VM. (boinc_471ac2b0000e2cf4, slot#3)
2026-03-17 16:15:04 (54627): Setting Memory Size for VM. (4400MB)
2026-03-17 16:15:04 (54627): Setting CPU Count for VM. (4)
2026-03-17 16:15:04 (54627): Setting Chipset Options for VM.
2026-03-17 16:15:04 (54627): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-17 16:15:04 (54627): Setting Boot Options for VM.
2026-03-17 16:15:04 (54627): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-17 16:15:04 (54627): Enabling VM Network Access.
2026-03-17 16:15:04 (54627): Disabling USB Support for VM.
2026-03-17 16:15:04 (54627): Disabling COM Port Support for VM.
2026-03-17 16:15:04 (54627): Disabling Audio Support for VM.
2026-03-17 16:15:04 (54627): Disabling Clipboard Support for VM.
2026-03-17 16:15:04 (54627): Disabling Drag and Drop Support for VM.
2026-03-17 16:15:04 (54627): Adding storage controller(s) to VM.
2026-03-17 16:15:05 (54627): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-17 16:15:05 (54627): Adding VirtualBox Guest Additions to VM.
2026-03-17 16:15:05 (54627): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-17 16:15:05 (54627): forwarding host port 52238 to guest port 80
2026-03-17 16:15:05 (54627): Enabling remote desktop for VM.
2026-03-17 16:15:05 (54627): Enabling shared directory for VM.
2026-03-17 16:15:05 (54627): Starting VM using VBoxManage interface. (boinc_471ac2b0000e2cf4, slot#3)
2026-03-17 16:15:09 (54627): Successfully started VM. (PID = '54730')
2026-03-17 16:15:09 (54627): Reporting VM Process ID to BOINC.
2026-03-17 16:15:09 (54627): Guest Log: BIOS: VirtualBox 7.0.22
2026-03-17 16:15:09 (54627): Guest Log: CPUID EDX: 0x178bfbff
2026-03-17 16:15:09 (54627): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-17 16:15:09 (54627): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-17 16:15:09 (54627): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-17 16:15:09 (54627): Detected: Web Application Enabled (http://localhost:52238)
2026-03-17 16:15:09 (54627): Detected: Remote Desktop Enabled (localhost:52239)
2026-03-17 16:15:10 (54627): VM state change detected. (old = 'running', new = 'paused')
2026-03-17 16:15:29 (54627): Preference change detected
2026-03-17 16:15:29 (54627): Setting CPU throttle for VM. (20%)
2026-03-17 16:15:29 (54627): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-17 16:15:29 (54627): VM state change detected. (old = 'paused', new = 'running')
2026-03-17 16:15:30 (54627): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-17 16:15:30 (54627): Guest Log: BIOS: Booting from Hard Disk...
2026-03-17 16:15:35 (54627): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-17 16:15:35 (54627): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-17 16:15:35 (54627): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-17 16:15:55 (54627): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-17 16:15:55 (54627): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-17 16:16:24 (54627): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.000180 main     Log opened 2026-03-17T15:16:03.589153000Z
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.000297 main     OS Product: Linux
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.000339 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.000377 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.000415 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.000416 main     Process ID: 1317
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.000416 main     Package type: LINUX_64BITS_GENERIC
2026-03-17 16:16:24 (54627): Guest Log: 00:00:00.002478 main     5.2.32 r132073 started. Verbose level = 0
2026-03-17 16:16:24 (54627): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-17 16:16:24 (54627): Guest Log: [INFO] Mounting shared directory
2026-03-17 16:16:25 (54627): Guest Log: [INFO] Checking for init_data.xml
2026-03-17 16:16:31 (54627): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-17 16:16:31 (54627): Guest Log: [INFO] Detected branch: prod
2026-03-17 16:16:32 (54627): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-17 16:16:32 (54627): Guest Log: Copying input files
2026-03-17 16:16:46 (54627): Guest Log: Copied input files into RunAtlas.
2026-03-17 16:16:46 (54627): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-17 16:16:46 (54627): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-17 16:16:46 (54627): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-17 16:16:46 (54627): Guest Log: Further information can be found at the LHC@home message board.
2026-03-17 16:16:51 (54627): Preference change detected
2026-03-17 16:16:51 (54627): Setting CPU throttle for VM. (20%)
2026-03-17 16:16:51 (54627): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-17 16:16:56 (54627): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-17 16:16:57 (54627): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-17 16:16:57 (54627): Guest Log: 2.6.3.0 1597 0 32184 157376 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-17 16:17:00 (54627): Guest Log: copied the webapp to /var/www
2026-03-17 16:17:00 (54627): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-17 16:17:00 (54627): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-17 16:17:00 (54627): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-17 16:17:01 (54627): Guest Log:  *** Starting ATLAS job. (PandaID=7057143109 taskID=49190790) ***
2026-03-17 17:55:16 (54627): Status Report: Elapsed Time: '6000.000000'
2026-03-17 17:55:16 (54627): Status Report: CPU Time: '15915.590000'
2026-03-17 19:35:02 (54627): Status Report: Elapsed Time: '12000.000000'
2026-03-17 19:35:02 (54627): Status Report: CPU Time: '34394.760000'
2026-03-17 20:21:36 (54627): VM state change detected. (old = 'running', new = 'paused')
2026-03-18 00:36:41 (54627): VM state change detected. (old = 'paused', new = 'running')
2026-03-18 00:36:49 (54627): Guest Log: 04:05:47.738637 timesync vgsvcTimeSyncWorker: Radical host time change: 15 305 898 000 000ns (HostNow=1 773 790 564 228 000 000 ns HostLast=1 773 775 258 330 000 000 ns)
2026-03-18 00:36:59 (54627): Guest Log: 04:05:57.746038 timesync vgsvcTimeSyncWorker: Radical guest time change: 15 263 105 863 000ns (GuestNow=1 773 790 574 334 427 000 ns GuestLast=1 773 775 311 228 564 000 ns fSetTimeLastLoop=true )
2026-03-18 00:55:15 (54627): Guest Log:  *** Job finished ***
2026-03-18 00:55:15 (54627): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:17,867 | INFO     | all workflow threads have been joined
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:17,867 | INFO     | end of generic workflow (traces error code: 0)
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:17,867 | INFO     | traces error code: 0
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:17,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:27,457 | INFO     | PID=5995 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:27,457 | INFO     | found 0 job(s) in 20 queues
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:27,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:27,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:27,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:27,458 | INFO     | [monitor] control thread has ended
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,023 [wrapper] ==== pilot stdout END ====
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,029 [wrapper] ==== wrapper stdout RESUME ====
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,036 [wrapper] pilotpid: 5995
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,042 [wrapper] Pilot exit status: 0
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,591 [wrapper] pandaids: 7057143109
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,957 [wrapper] cleanup supervisor_pilot 28768 5996
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,963 [wrapper] Test setup, not cleaning
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,970 [wrapper] apfmon messages muted
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:28,976 [wrapper] ==== wrapper stdout END ====
2026-03-18 00:55:15 (54627): Guest Log: 2026-03-17 23:54:29,059 [wrapper] ==== wrapper stderr END ====
2026-03-18 00:55:15 (54627): Guest Log:  *** Error codes and diagnostics ***
2026-03-18 00:55:15 (54627): Guest Log:     "exeErrorCode": 0,
2026-03-18 00:55:15 (54627): Guest Log:     "exeErrorDiag": "",
2026-03-18 00:55:15 (54627): Guest Log:     "pilotErrorCode": 0,
2026-03-18 00:55:15 (54627): Guest Log:     "pilotErrorDiag": "",
2026-03-18 00:55:15 (54627): Guest Log:  *** Listing of results directory ***
2026-03-18 00:55:16 (54627): Guest Log: total 236288
2026-03-18 00:55:16 (54627): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 17 06:06 runpilot2-wrapper.sh
2026-03-18 00:55:16 (54627): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 17 06:08 pilot3.tar.gz
2026-03-18 00:55:16 (54627): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 17 06:08 queuedata.json
2026-03-18 00:55:16 (54627): Guest Log: -rw-r-----. 1 atlas atlas     15845 Mar 17 15:16 start_atlas.sh
2026-03-18 00:55:16 (54627): Guest Log: -rw-r-----. 1 atlas atlas    597533 Mar 17 15:16 input.tar.gz
2026-03-18 00:55:16 (54627): Guest Log: -rw-r--r--. 1 atlas atlas      8188 Mar 17 15:16 init_data.xml
2026-03-18 00:55:16 (54627): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 17 15:16 EVNT.49124643._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-18 00:55:16 (54627): Guest Log: -rw-r--r--. 1 atlas atlas      2595 Mar 17 15:16 pandaJob.out
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas   1010308 Mar 17 15:18 agis_schedconf.cvmfs.json
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas       427 Mar 17 15:18 workernode_map.json
2026-03-18 00:55:16 (54627): Guest Log: drwx------. 5 atlas atlas      4096 Mar 17 15:18 pilot3
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas 233033971 Mar 17 23:52 HITS.49190790._000006.pool.root.1
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas      1033 Mar 17 23:53 memory_monitor_summary.json
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 17 23:53 agis_ddmendpoints.agis.ALL.json
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas    408506 Mar 17 23:53 log.49190790._000006.job.log.tgz.1
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas      6366 Mar 17 23:53 heartbeat.json
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas        98 Mar 17 23:54 pilot_heartbeat.json
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas       744 Mar 17 23:54 pilotlog.txt
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas   2121199 Mar 17 23:54 log.49190790._000006.job.log.1
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas       357 Mar 17 23:54 output.list
2026-03-18 00:55:16 (54627): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 17 23:54 runtime_log
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas   2549760 Mar 17 23:54 result.tar.gz
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas       675 Mar 17 23:54 TC3NDmjkcM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmAtwLDmBAJv6m.diag
2026-03-18 00:55:16 (54627): Guest Log: -rw-r--r--. 1 atlas atlas      8800 Mar 17 23:54 runtime_log.err
2026-03-18 00:55:16 (54627): Guest Log: Looking for outputfile HITS.49190790._000006.pool.root.1
2026-03-18 00:55:16 (54627): Guest Log: HITS file was successfully produced
2026-03-18 00:55:16 (54627): Guest Log: -rw-------. 1 atlas atlas 233033971 Mar 17 23:52 /home/atlas/RunAtlas/HITS.49190790._000006.pool.root.1
2026-03-18 00:55:19 (54627): Guest Log: Successfully finished the ATLAS job!
2026-03-18 00:55:19 (54627): Guest Log: Copying the results back to the shared directory!
2026-03-18 00:55:21 (54627): Guest Log:  *** Contents of shared directory: ***
2026-03-18 00:55:21 (54627): Guest Log: total 263260
2026-03-18 00:55:21 (54627): Guest Log: -rw-rw----. 1 root root 258189306 Mar 17 15:15 ATLAS.root_0
2026-03-18 00:55:21 (54627): Guest Log: -rw-rw-r--. 1 root root      8188 Mar 17 15:15 init_data.xml
2026-03-18 00:55:21 (54627): Guest Log: -rw-rw----. 1 root root    597533 Mar 17 15:15 input.tar.gz
2026-03-18 00:55:21 (54627): Guest Log: -rw-r--r--. 1 root root   2549760 Mar 17  2026 result.tar.gz
2026-03-18 00:55:21 (54627): Guest Log: -rw-rw----. 1 root root     15845 Mar 17 15:15 start_atlas.sh
2026-03-18 00:55:21 (54627): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-18 00:55:22 (54627): VM Completion File Detected.
2026-03-18 00:55:22 (54627): Powering off VM.
2026-03-18 00:55:23 (54627): Successfully stopped VM.
2026-03-18 00:55:23 (54627): Deregistering VM. (boinc_471ac2b0000e2cf4, slot#3)
2026-03-18 00:55:23 (54627): Removing network bandwidth throttle group from VM.
2026-03-18 00:55:23 (54627): Removing VM from VirtualBox.
2026-03-18 00:55:28 (54627): called boinc_finish(0)

</stderr_txt>
]]>

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