Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-17 10:20:36 (5468): vboxwrapper version 26210
2026-03-17 10:20:36 (5468): BOINC client version: 8.2.8
2026-03-17 10:20:37 (5468): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-17 10:20:38 (5468): Successfully copied 'init_data.xml' to the shared directory.
2026-03-17 10:20:38 (5468): Create VM. (boinc_ccdad0994fb3bdc0, slot#7)
2026-03-17 10:20:40 (5468): Setting Memory Size for VM. (4800MB)
2026-03-17 10:20:40 (5468): Setting CPU Count for VM. (8)
2026-03-17 10:20:41 (5468): Setting Chipset Options for VM.
2026-03-17 10:20:41 (5468): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-17 10:20:41 (5468): Setting Boot Options for VM.
2026-03-17 10:20:42 (5468): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-17 10:20:43 (5468): Enabling VM Network Access.
2026-03-17 10:20:43 (5468): Disabling USB Support for VM.
2026-03-17 10:20:43 (5468): Disabling COM Port Support for VM.
2026-03-17 10:20:43 (5468): Disabling LPT Port Support for VM.
2026-03-17 10:20:44 (5468): Disabling Audio Support for VM.
2026-03-17 10:20:44 (5468): Disabling Clipboard Support for VM.
2026-03-17 10:20:44 (5468): Disabling Drag and Drop Support for VM.
2026-03-17 10:20:45 (5468): Adding storage controller(s) to VM.
2026-03-17 10:20:45 (5468): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-17 10:20:46 (5468): Adding VirtualBox Guest Additions to VM.
2026-03-17 10:20:46 (5468): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-17 10:20:47 (5468): forwarding host port 50239 to guest port 80
2026-03-17 10:20:47 (5468): Enabling remote desktop for VM.
2026-03-17 10:20:47 (5468): Required extension pack not installed, remote desktop not enabled.
2026-03-17 10:20:47 (5468): Enabling shared directory for VM.
2026-03-17 10:20:48 (5468): Starting VM using VBoxManage interface. (boinc_ccdad0994fb3bdc0, slot#7)
2026-03-17 10:20:59 (5468): Successfully started VM. (PID = '7332')
2026-03-17 10:20:59 (5468): Reporting VM Process ID to BOINC.
2026-03-17 10:20:59 (5468): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-17 10:20:59 (5468): Guest Log: CPUID EDX: 0x178bfbff
2026-03-17 10:20:59 (5468): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-17 10:20:59 (5468): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-17 10:20:59 (5468): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-17 10:20:59 (5468): Detected: Web Application Enabled (http://localhost:50239)
2026-03-17 10:20:59 (5468): Preference change detected
2026-03-17 10:20:59 (5468): Setting CPU throttle for VM. (100%)
2026-03-17 10:20:59 (5468): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-17 10:21:01 (5468): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-17 10:21:01 (5468): Guest Log: BIOS: Booting from Hard Disk...
2026-03-17 10:21:04 (5468): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-17 10:21:04 (5468): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-17 10:21:04 (5468): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-17 10:21:39 (5468): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-17 10:21:39 (5468): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-17 10:21:54 (5468): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.000966 main     Log opened 2026-03-17T10:21:52.752186000Z
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.001658 main     OS Product: Linux
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.001764 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.001826 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.001873 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.001874 main     Process ID: 1383
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.001875 main     Package type: LINUX_64BITS_GENERIC
2026-03-17 10:21:54 (5468): Guest Log: 00:00:00.007373 main     5.2.32 r132073 started. Verbose level = 0
2026-03-17 10:21:55 (5468): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-17 10:21:55 (5468): Guest Log: [INFO] Mounting shared directory
2026-03-17 10:21:55 (5468): Guest Log: [INFO] Checking for init_data.xml
2026-03-17 10:22:02 (5468): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-17 10:22:03 (5468): Guest Log: [INFO] Detected branch: prod
2026-03-17 10:22:03 (5468): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-17 10:22:03 (5468): Guest Log: Copying input files
2026-03-17 10:22:04 (5468): Guest Log: 00:00:10.014405 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 010 955 282 000ns (GuestNow=1 773 760 923 719 828 000 ns GuestLast=1 773 742 912 764 546 000 ns fSetTimeLastLoop=true )
2026-03-17 10:22:08 (5468): Guest Log: Copied input files into RunAtlas.
2026-03-17 10:22:08 (5468): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-17 10:22:08 (5468): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-17 10:22:08 (5468): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-17 10:22:08 (5468): Guest Log: Further information can be found at the LHC@home message board.
2026-03-17 10:22:19 (5468): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-17 10:22:20 (5468): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-17 10:22:20 (5468): Guest Log: 2.6.3.0 1665 0 30228 157376 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-17 10:22:23 (5468): Guest Log: copied the webapp to /var/www
2026-03-17 10:22:23 (5468): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-17 10:22:23 (5468): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-17 10:22:23 (5468): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-17 10:22:23 (5468): Guest Log:  *** Starting ATLAS job. (PandaID=7057141468 taskID=49190643) ***
2026-03-17 12:01:04 (5468): Status Report: Elapsed Time: '6000.000000'
2026-03-17 12:01:04 (5468): Status Report: CPU Time: '33566.328125'
2026-03-17 13:41:12 (5468): Status Report: Elapsed Time: '12000.000000'
2026-03-17 13:41:12 (5468): Status Report: CPU Time: '75758.859375'
2026-03-17 15:21:20 (5468): Status Report: Elapsed Time: '18000.000000'
2026-03-17 15:21:20 (5468): Status Report: CPU Time: '121530.187500'
2026-03-17 16:35:23 (5468): Guest Log:  *** Job finished ***
2026-03-17 16:35:23 (5468): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:34:54,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:34:54,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:14,201 | INFO     | [monitor] cgroup control has ended
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:14,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606428112704)>', '<ExcThread(monitor, started 140605980124928)>']
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:15,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:15,253 | INFO     | [monitor] control thread has ended
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:19,790 | INFO     | all workflow threads have been joined
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:19,791 | INFO     | end of generic workflow (traces error code: 0)
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:19,791 | INFO     | traces error code: 0
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:19,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,241 [wrapper] ==== pilot stdout END ====
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,263 [wrapper] ==== wrapper stdout RESUME ====
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,283 [wrapper] pilotpid: 6137
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,300 [wrapper] Pilot exit status: 0
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,572 [wrapper] pandaids: 7057141468
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,700 [wrapper] cleanup supervisor_pilot 31178 6138
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,725 [wrapper] Test setup, not cleaning
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,752 [wrapper] apfmon messages muted
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,783 [wrapper] ==== wrapper stdout END ====
2026-03-17 16:35:23 (5468): Guest Log: 2026-03-17 21:35:20,806 [wrapper] ==== wrapper stderr END ====
2026-03-17 16:35:23 (5468): Guest Log:  *** Error codes and diagnostics ***
2026-03-17 16:35:23 (5468): Guest Log:     "exeErrorCode": 0,
2026-03-17 16:35:23 (5468): Guest Log:     "exeErrorDiag": "",
2026-03-17 16:35:23 (5468): Guest Log:     "pilotErrorCode": 0,
2026-03-17 16:35:23 (5468): Guest Log:     "pilotErrorDiag": "",
2026-03-17 16:35:23 (5468): Guest Log:  *** Listing of results directory ***
2026-03-17 16:35:23 (5468): Guest Log: total 235096
2026-03-17 16:35:23 (5468): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 17 06:06 runpilot2-wrapper.sh
2026-03-17 16:35:23 (5468): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 17 06:08 pilot3.tar.gz
2026-03-17 16:35:23 (5468): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 17 06:08 queuedata.json
2026-03-17 16:35:23 (5468): Guest Log: -rwxr-xr-x. 1 atlas atlas      5996 Mar 17 15:22 init_data.xml
2026-03-17 16:35:23 (5468): Guest Log: -rwxr-xr-x. 1 atlas atlas    597532 Mar 17 15:22 input.tar.gz
2026-03-17 16:35:23 (5468): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 17 15:22 start_atlas.sh
2026-03-17 16:35:23 (5468): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 17 15:22 EVNT.49124129._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-17 16:35:23 (5468): Guest Log: -rw-r--r--. 1 atlas atlas      2580 Mar 17 15:22 pandaJob.out
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas   1010308 Mar 17 15:25 agis_schedconf.cvmfs.json
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas       429 Mar 17 15:25 workernode_map.json
2026-03-17 16:35:23 (5468): Guest Log: drwx------. 5 atlas atlas      4096 Mar 17 15:25 pilot3
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas 229717447 Mar 17 21:33 HITS.49190643._000013.pool.root.1
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas      1049 Mar 17 21:34 memory_monitor_summary.json
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas        95 Mar 17 21:34 pilot_heartbeat.json
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 17 21:34 agis_ddmendpoints.agis.ALL.json
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas    572702 Mar 17 21:34 log.49190643._000013.job.log.tgz.1
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas      6387 Mar 17 21:34 heartbeat.json
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas      4987 Mar 17 21:35 pilotlog.txt
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas   3004065 Mar 17 21:35 log.49190643._000013.job.log.1
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas       357 Mar 17 21:35 output.list
2026-03-17 16:35:23 (5468): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 17 21:35 runtime_log
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas   3594240 Mar 17 21:35 result.tar.gz
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas       659 Mar 17 21:35 tQtKDmckcM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3szLDmaUYQmm.diag
2026-03-17 16:35:23 (5468): Guest Log: -rw-r--r--. 1 atlas atlas      8749 Mar 17 21:35 runtime_log.err
2026-03-17 16:35:23 (5468): Guest Log: Looking for outputfile HITS.49190643._000013.pool.root.1
2026-03-17 16:35:23 (5468): Guest Log: HITS file was successfully produced
2026-03-17 16:35:23 (5468): Guest Log: -rw-------. 1 atlas atlas 229717447 Mar 17 21:33 /home/atlas/RunAtlas/HITS.49190643._000013.pool.root.1
2026-03-17 16:35:25 (5468): Guest Log: Successfully finished the ATLAS job!
2026-03-17 16:35:25 (5468): Guest Log: Copying the results back to the shared directory!
2026-03-17 16:35:26 (5468): Guest Log:  *** Contents of shared directory: ***
2026-03-17 16:35:26 (5468): Guest Log: total 479904
2026-03-17 16:35:26 (5468): Guest Log: -rwxrwxrwx. 1 root root 257478784 Mar 17 15:20 ATLAS.root_0
2026-03-17 16:35:26 (5468): Guest Log: -rwxrwxrwx. 1 root root 229717447 Mar 17 21:35 HITS.pool.root.1
2026-03-17 16:35:26 (5468): Guest Log: -rwxrwxrwx. 1 root root      5996 Mar 17 15:20 init_data.xml
2026-03-17 16:35:26 (5468): Guest Log: -rwxrwxrwx. 1 root root    597532 Mar 17 14:19 input.tar.gz
2026-03-17 16:35:26 (5468): Guest Log: -rwxrwxrwx. 1 root root   3594240 Mar 17 21:35 result.tar.gz
2026-03-17 16:35:26 (5468): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 17 14:19 start_atlas.sh
2026-03-17 16:35:26 (5468): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-17 16:35:26 (5468): VM Completion File Detected.
2026-03-17 16:35:26 (5468): Powering off VM.
2026-03-17 16:35:29 (5468): Successfully stopped VM.
2026-03-17 16:35:29 (5468): Deregistering VM. (boinc_ccdad0994fb3bdc0, slot#7)
2026-03-17 16:35:30 (5468): Removing network bandwidth throttle group from VM.
2026-03-17 16:35:30 (5468): Removing VM from VirtualBox.
2026-03-17 16:35:35 (5468): called boinc_finish(0)

</stderr_txt>
]]>

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