Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:22:59 (19651): wrapper (7.7.26015): starting
12:22:59 (19651): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 12:22:59] Arguments: --nthreads 8
[2026-03-18 12:22:59] Threads: 8
[2026-03-18 12:22:59] Checking for CVMFS
[2026-03-18 12:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 12:23:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 12:23:04] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 12:23:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 12:23:04] 2.11.2.0 3545 133267 138604 157411 0 217 19852277 25165825 4464 130560 155 46067269 99.826 35843713 1163 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 12:23:04] CVMFS is ok
[2026-03-18 12:23:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 12:23:04] Checking for apptainer binary...
[2026-03-18 12:23:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 12:23:04] Running /usr/bin/apptainer --version
[2026-03-18 12:23:05] apptainer version 1.3.2-1.el7
[2026-03-18 12:23:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 12:23:14] cg-vwn466.simple-grid.lan
[2026-03-18 12:23:14] apptainer works
[2026-03-18 12:23:14] Set ATHENA_PROC_NUMBER=8
[2026-03-18 12:23:14] Set ATHENA_CORE_NUMBER=8
[2026-03-18 12:23:14] Starting ATLAS job with PandaID=7057141430
[2026-03-18 12:23:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 18:22:14]  *** The last 200 lines of the pilot log: ***
[2026-03-18 18:22:14] 2026-03-18 17:21:26,566 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-7057141430/jobReport.json
[2026-03-18 18:22:14] 2026-03-18 17:21:26,569 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-03-18 18:22:14] 2026-03-18 17:21:26,569 | INFO     | this job has now completed (state=finished)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,569 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,569 | INFO     | log transfer has been attempted: DONE
[2026-03-18 18:22:14] 2026-03-18 17:21:26,570 | INFO     | job 7057141430 has finished - writing final server update
[2026-03-18 18:22:14] 2026-03-18 17:21:26,570 | INFO     | total number of processed events: 400 (read)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,572 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7057141430/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,573 | INFO     | extracted standard info from prmon json
[2026-03-18 18:22:14] 2026-03-18 17:21:26,573 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 18:22:14] 2026-03-18 17:21:26,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 18:22:14] 2026-03-18 17:21:26,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 18:22:14] 2026-03-18 17:21:26,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 18:22:14] 2026-03-18 17:21:26,587 | INFO     | fitting pss+swap vs Time
[2026-03-18 18:22:14] 2026-03-18 17:21:26,588 | INFO     | sum of square deviations: 12512874612.0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,592 | INFO     | sum of deviations: 20896410466.00002
[2026-03-18 18:22:14] 2026-03-18 17:21:26,592 | INFO     | mean x: 1773844000.0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,592 | INFO     | mean y: 2506486.5306122447
[2026-03-18 18:22:14] 2026-03-18 17:21:26,593 | INFO     | intersect: -2959800215.64825
[2026-03-18 18:22:14] 2026-03-18 17:21:26,593 | INFO     | chi2: 4.509083949699711
[2026-03-18 18:22:14] 2026-03-18 17:21:26,594 | INFO     | sum of square deviations: 11973599384.5
[2026-03-18 18:22:14] 2026-03-18 17:21:26,597 | INFO     | sum of deviations: 43642064175.0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,598 | INFO     | mean x: 1773843847.5
[2026-03-18 18:22:14] 2026-03-18 17:21:26,598 | INFO     | mean y: 2512842.408284024
[2026-03-18 18:22:14] 2026-03-18 17:21:26,598 | INFO     | intersect: -6462895306.225595
[2026-03-18 18:22:14] 2026-03-18 17:21:26,598 | INFO     | chi2: 3.7533394723659117
[2026-03-18 18:22:14] 2026-03-18 17:21:26,599 | INFO     | current chi2=3.7533394723659117 (change=16.76048806729645 %)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,599 | INFO     | right removable region: 337
[2026-03-18 18:22:14] 2026-03-18 17:21:26,599 | INFO     | sum of square deviations: 11973599384.5
[2026-03-18 18:22:14] 2026-03-18 17:21:26,603 | INFO     | sum of deviations: -82866992141.00002
[2026-03-18 18:22:14] 2026-03-18 17:21:26,603 | INFO     | mean x: 1773844152.5
[2026-03-18 18:22:14] 2026-03-18 17:21:26,603 | INFO     | mean y: 2535774.5147928996
[2026-03-18 18:22:14] 2026-03-18 17:21:26,604 | INFO     | intersect: 12278972017.643246
[2026-03-18 18:22:14] 2026-03-18 17:21:26,604 | INFO     | chi2: 1.043594297462809
[2026-03-18 18:22:14] 2026-03-18 17:21:26,604 | INFO     | current chi2=1.043594297462809 (change=76.85573590768236 %)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,605 | INFO     | sum of square deviations: 11450045382.0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,608 | INFO     | sum of deviations: -95578338183.00003
[2026-03-18 18:22:14] 2026-03-18 17:21:26,608 | INFO     | mean x: 1773844305.0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,609 | INFO     | mean y: 2539442.906906907
[2026-03-18 18:22:14] 2026-03-18 17:21:26,609 | INFO     | intersect: 14809562927.181044
[2026-03-18 18:22:14] 2026-03-18 17:21:26,609 | INFO     | chi2: 0.9136449437545322
[2026-03-18 18:22:14] 2026-03-18 17:21:26,609 | INFO     | current chi2=0.9136449437545322 (change=12.452095035801767 %)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,610 | INFO     | left removable region: 20
[2026-03-18 18:22:14] 2026-03-18 17:21:26,610 | INFO     | sum of square deviations: 9877610318.0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,613 | INFO     | sum of deviations: -63106321337.99999
[2026-03-18 18:22:14] 2026-03-18 17:21:26,614 | INFO     | mean x: 1773844427.0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,614 | INFO     | mean y: 2543861.432176656
[2026-03-18 18:22:14] 2026-03-18 17:21:26,614 | INFO     | intersect: 11335325051.422272
[2026-03-18 18:22:14] 2026-03-18 17:21:26,614 | INFO     | chi2: 0.12172399956557242
[2026-03-18 18:22:14] 2026-03-18 17:21:26,615 | INFO     | current memory leak: -6.39 B/s (using 317 data points, chi2=0.12)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,615 | INFO     | could have reported an average CPU frequency of 2250 MHz (15 samples)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | ..............................
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | . Timing measurements:
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | . get job = 0 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | . initial setup = 99 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | . payload setup = 138 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | . stage-in = 0 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | . payload execution = 21018 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,616 | INFO     | . stage-out = 3 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,617 | INFO     | . log creation = 1 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,617 | INFO     | ..............................
[2026-03-18 18:22:14] 2026-03-18 17:21:26,742 | INFO     | 
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | job summary report
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | --------------------------------------------------
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | PanDA job id: 7057141430
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | task id: 49190583
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | errors: (none)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | pilot state: finished 
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | transexitcode: 0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,743 | INFO     | exeerrorcode: 0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,744 | INFO     | exeerrordiag: 
[2026-03-18 18:22:14] 2026-03-18 17:21:26,744 | INFO     | exitcode: 0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,744 | INFO     | exitmsg: OK
[2026-03-18 18:22:14] 2026-03-18 17:21:26,744 | INFO     | cpuconsumptiontime: 81406 s
[2026-03-18 18:22:14] 2026-03-18 17:21:26,744 | INFO     | nevents: 400
[2026-03-18 18:22:14] 2026-03-18 17:21:26,744 | INFO     | neventsw: 0
[2026-03-18 18:22:14] 2026-03-18 17:21:26,752 | INFO     | pid: 28190
[2026-03-18 18:22:14] 2026-03-18 17:21:26,752 | INFO     | pgrp: 28190
[2026-03-18 18:22:14] 2026-03-18 17:21:26,753 | INFO     | corecount: 8
[2026-03-18 18:22:14] 2026-03-18 17:21:26,753 | INFO     | event service: False
[2026-03-18 18:22:14] 2026-03-18 17:21:26,753 | INFO     | sizes: {0: 2279772, 1: 2280229, 2: 2280317, 12: 2280317, 21161: 2313919, 21166: 2322917, 21167: 2323295}
[2026-03-18 18:22:14] 2026-03-18 17:21:26,753 | INFO     | --------------------------------------------------
[2026-03-18 18:22:14] 2026-03-18 17:21:26,753 | INFO     | 
[2026-03-18 18:22:14] 2026-03-18 17:21:26,746 | INFO     | time since job start (21179s) is within the limit (345600.0s)
[2026-03-18 18:22:14] 2026-03-18 17:21:26,753 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-18 18:22:14] 2026-03-18 17:21:27,263 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,263 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,263 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,263 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,264 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 18:22:14] 2026-03-18 17:21:27,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,265 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 18:22:14] 2026-03-18 17:21:27,265 | INFO     | job 7057141430 has completed (purged errors)
[2026-03-18 18:22:14] 2026-03-18 17:21:27,265 | INFO     | overall cleanup function is called
[2026-03-18 18:22:14] 2026-03-18 17:21:28,273 | INFO     | --- collectZombieJob: --- 10, [28190]
[2026-03-18 18:22:14] 2026-03-18 17:21:28,274 | INFO     | zombie collector waiting for pid 28190
[2026-03-18 18:22:14] 2026-03-18 17:21:28,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 18:22:14] 2026-03-18 17:21:28,274 | INFO     | collected zombie processes
[2026-03-18 18:22:14] 2026-03-18 17:21:28,274 | INFO     | will attempt to kill all subprocesses of pid=28190
[2026-03-18 18:22:14] 2026-03-18 17:21:28,371 | INFO     | process IDs to be killed: [28190] (in reverse order)
[2026-03-18 18:22:14] 2026-03-18 17:21:28,508 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 18:22:14] 2026-03-18 17:21:28,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 18:22:14] 2026-03-18 17:21:28,511 | INFO     | did not find any defunct processes belonging to 28190
[2026-03-18 18:22:14] 2026-03-18 17:21:28,514 | INFO     | did not find any defunct processes belonging to 28190
[2026-03-18 18:22:14] 2026-03-18 17:21:28,514 | INFO     | ready for new job
[2026-03-18 18:22:14] 2026-03-18 17:21:28,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 18:22:14] 2026-03-18 17:21:28,517 | INFO     | **************************************
[2026-03-18 18:22:14] 2026-03-18 17:21:28,517 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 18:22:14] 2026-03-18 17:21:28,517 | INFO     | **************************************
[2026-03-18 18:22:14] 2026-03-18 17:21:28,517 | INFO     | 
[2026-03-18 18:22:14] 2026-03-18 17:21:28,518 | INFO     | pilot is running in a VM
[2026-03-18 18:22:14] 2026-03-18 17:21:28,518 | INFO     | architecture information:
[2026-03-18 18:22:14] 2026-03-18 17:21:28,524 | INFO     | executing command: cat /etc/os-release
[2026-03-18 18:22:14] 2026-03-18 17:21:28,623 | INFO     | cat /etc/os-release:
[2026-03-18 18:22:14] NAME="CentOS Linux"
[2026-03-18 18:22:14] VERSION="7 (Core)"
[2026-03-18 18:22:14] ID="centos"
[2026-03-18 18:22:14] ID_LIKE="rhel fedora"
[2026-03-18 18:22:14] VERSION_ID="7"
[2026-03-18 18:22:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 18:22:14] ANSI_COLOR="0;31"
[2026-03-18 18:22:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 18:22:14] HOME_URL="https://www.centos.org/"
[2026-03-18 18:22:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 18:22:14] 
[2026-03-18 18:22:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 18:22:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 18:22:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 18:22:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 18:22:14] 
[2026-03-18 18:22:14] 2026-03-18 17:21:28,623 | INFO     | **************************************
[2026-03-18 18:22:14] 2026-03-18 17:21:29,126 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-18 18:22:14] 2026-03-18 17:21:29,475 | INFO     | sufficient remaining disk space (495663972352 B)
[2026-03-18 18:22:14] 2026-03-18 17:21:29,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 18:22:14] 2026-03-18 17:21:29,476 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 18:22:14] 2026-03-18 17:21:29,476 | INFO     | update_server=False
[2026-03-18 18:22:14] 2026-03-18 17:21:29,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 18:22:14] 2026-03-18 17:21:29,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 18:22:14] 2026-03-18 17:21:29,720 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 18:22:14] 2026-03-18 17:21:29,721 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 18:22:14] 2026-03-18 17:21:29,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:22:14] 2026-03-18 17:21:29,721 | INFO     | will abort loop
[2026-03-18 18:22:14] 2026-03-18 17:21:30,213 | INFO     | all payload control threads have been joined
[2026-03-18 18:22:14] 2026-03-18 17:21:30,362 | INFO     | all job control threads have been joined
[2026-03-18 18:22:14] 2026-03-18 17:21:30,425 | INFO     | all data control threads have been joined
[2026-03-18 18:22:14] 2026-03-18 17:21:30,482 | INFO     | [job] retrieve thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:30,714 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:30,726 | INFO     | [job] job monitor thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:30,740 | INFO     | [job] validate thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,201 | INFO     | [data] copytool_in thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,219 | INFO     | [payload] control thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,368 | INFO     | [job] control thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,425 | INFO     | [payload] validate_post thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,431 | INFO     | [data] control thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,487 | INFO     | [data] copytool_out thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,704 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 18:22:14] 2026-03-18 17:21:31,760 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,782 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:31,853 | INFO     | [payload] failed_post thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:32,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 18:22:14] 2026-03-18 17:21:32,761 | INFO     | [job] queue monitor thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:36,586 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 18:22:14] 2026-03-18 17:21:59,906 | INFO     | PID=23670 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 18:22:14] 2026-03-18 17:21:59,906 | INFO     | .. there are 9 such processes running
[2026-03-18 18:22:14] 2026-03-18 17:21:59,907 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 18:22:14] 2026-03-18 17:21:59,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 18:22:14] 2026-03-18 17:21:59,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 18:22:14] 2026-03-18 17:22:03,168 | INFO     | [monitor] cgroup control has ended
[2026-03-18 18:22:14] 2026-03-18 17:22:04,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140403323201344)>', '<ExcThread(monitor, started 140402598336256)>']
[2026-03-18 18:22:14] 2026-03-18 17:22:04,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 18:22:14] 2026-03-18 17:22:04,937 | INFO     | [monitor] control thread has ended
[2026-03-18 18:22:14] 2026-03-18 17:22:09,686 | INFO     | all workflow threads have been joined
[2026-03-18 18:22:14] 2026-03-18 17:22:09,687 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 18:22:14] 2026-03-18 17:22:09,687 | INFO     | traces error code: 0
[2026-03-18 18:22:14] 2026-03-18 17:22:09,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 18:22:14] 2026-03-18 17:22:10,033 [wrapper] ==== pilot stdout END ====
[2026-03-18 18:22:14] 2026-03-18 17:22:10,108 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 18:22:14] 2026-03-18 17:22:10,189 [wrapper] pilotpid: 23670
[2026-03-18 18:22:14] 2026-03-18 17:22:10,231 [wrapper] Pilot exit status: 0
[2026-03-18 18:22:14] 2026-03-18 17:22:10,764 [wrapper] pandaids: 7057141430
[2026-03-18 18:22:14] 2026-03-18 17:22:11,520 [wrapper] cleanup supervisor_pilot  4429 23671
[2026-03-18 18:22:14] 2026-03-18 17:22:11,620 [wrapper] Test setup, not cleaning
[2026-03-18 18:22:14] 2026-03-18 17:22:11,699 [wrapper] apfmon messages muted
[2026-03-18 18:22:14] 2026-03-18 17:22:11,739 [wrapper] ==== wrapper stdout END ====
[2026-03-18 18:22:14] 2026-03-18 17:22:11,773 [wrapper] ==== wrapper stderr END ====
[2026-03-18 18:22:14]  *** Error codes and diagnostics ***
[2026-03-18 18:22:14]     "exeErrorCode": 0,
[2026-03-18 18:22:14]     "exeErrorDiag": "",
[2026-03-18 18:22:14]     "pilotErrorCode": 0,
[2026-03-18 18:22:14]     "pilotErrorDiag": "",
[2026-03-18 18:22:14]  *** Listing of results directory ***
[2026-03-18 18:22:14] total 455272
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc    585013 Mar 17 07:02 pilot3.tar.gz
[2026-03-18 18:22:14] -rwx------. 1 boinc boinc     36322 Mar 17 07:04 runpilot2-wrapper.sh
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc      5111 Mar 17 07:05 queuedata.json
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc       100 Mar 18 12:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 18:22:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 12:22 run_atlas
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc       105 Mar 18 12:22 job.xml
[2026-03-18 18:22:14] -rw-r--r--. 2 boinc boinc 249442964 Mar 18 12:22 EVNT.49123905._000001.pool.root.1
[2026-03-18 18:22:14] -rw-r--r--. 2 boinc boinc     15845 Mar 18 12:22 start_atlas.sh
[2026-03-18 18:22:14] drwxrwx--x. 2 boinc boinc        68 Mar 18 12:22 shared
[2026-03-18 18:22:14] -rw-r--r--. 2 boinc boinc    597520 Mar 18 12:22 input.tar.gz
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc      6392 Mar 18 12:22 init_data.xml
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc         0 Mar 18 12:22 boinc_lockfile
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc      2587 Mar 18 12:23 pandaJob.out
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc       413 Mar 18 12:28 workernode_map.json
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc   1011573 Mar 18 12:28 agis_schedconf.cvmfs.json
[2026-03-18 18:22:14] drwx------. 5 boinc boinc      4096 Mar 18 12:28 pilot3
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc 205821935 Mar 18 18:20 HITS.49190583._000021.pool.root.1
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc       531 Mar 18 18:20 boinc_task_state.xml
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc      1019 Mar 18 18:21 memory_monitor_summary.json
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc   1511579 Mar 18 18:21 agis_ddmendpoints.agis.ALL.json
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc    565112 Mar 18 18:21 log.49190583._000021.job.log.tgz.1
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc      6309 Mar 18 18:21 heartbeat.json
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc        28 Mar 18 18:21 wrapper_checkpoint.txt
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc      8192 Mar 18 18:21 boinc_mmap_file
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc        95 Mar 18 18:21 pilot_heartbeat.json
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc      5066 Mar 18 18:22 pilotlog.txt
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc   2936306 Mar 18 18:22 log.49190583._000021.job.log.1
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc       357 Mar 18 18:22 output.list
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc       620 Mar 18 18:22 runtime_log
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc   3522560 Mar 18 18:22 result.tar.gz
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc      8816 Mar 18 18:22 runtime_log.err
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc       657 Mar 18 18:22 FUEODmTicM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxkwLDmIpWPEo.diag
[2026-03-18 18:22:14] -rw-r--r--. 1 boinc boinc     20917 Mar 18 18:22 stderr.txt
[2026-03-18 18:22:14] HITS file was successfully produced:
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc 205821935 Mar 18 18:20 shared/HITS.pool.root.1
[2026-03-18 18:22:14]  *** Contents of shared directory: ***
[2026-03-18 18:22:14] total 448640
[2026-03-18 18:22:14] -rw-r--r--. 2 boinc boinc 249442964 Mar 18 12:22 ATLAS.root_0
[2026-03-18 18:22:14] -rw-r--r--. 2 boinc boinc     15845 Mar 18 12:22 start_atlas.sh
[2026-03-18 18:22:14] -rw-r--r--. 2 boinc boinc    597520 Mar 18 12:22 input.tar.gz
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc 205821935 Mar 18 18:20 HITS.pool.root.1
[2026-03-18 18:22:14] -rw-------. 1 boinc boinc   3522560 Mar 18 18:22 result.tar.gz
18:22:15 (19651): run_atlas exited; CPU time 81713.064452
18:22:15 (19651): called boinc_finish(0)

</stderr_txt>
]]>

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