Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
11:34:42 (2892153): wrapper (7.7.26015): starting
11:34:42 (2892153): wrapper: running run_atlas (--nthreads 4)
[2026-03-20 11:34:42] Arguments: --nthreads 4
[2026-03-20 11:34:42] Threads: 4
[2026-03-20 11:34:42] Checking for CVMFS
[2026-03-20 11:34:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-20 11:34:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-20 11:34:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-20 11:34:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-20 11:34:43] 2.13.3.0 11582 46730 46996 157494 2 49 20440151 33554433 0 130560 0 23416032 99.968 1955578 303 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-03-20 11:34:43] CVMFS is ok
[2026-03-20 11:34:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-20 11:34:43] Checking for apptainer binary...
[2026-03-20 11:34:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-20 11:34:43] Running /usr/bin/apptainer --version
[2026-03-20 11:34:43] apptainer version 1.4.5
[2026-03-20 11:34:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-20 11:34:43] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-03-20 11:34:43] apptainer works
[2026-03-20 11:34:43] Set ATHENA_PROC_NUMBER=4
[2026-03-20 11:34:43] Set ATHENA_CORE_NUMBER=4
[2026-03-20 11:34:43] Starting ATLAS job with PandaID=7056975510
[2026-03-20 11:34:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 13:56:09]  *** The last 200 lines of the pilot log: ***
[2026-03-20 13:56:09] 2026-03-20 11:55:27,341 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 13:56:09] 2026-03-20 11:55:27,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 13:56:09] 2026-03-20 11:55:27,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 13:56:09] 2026-03-20 11:55:27,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 13:56:09] 2026-03-20 11:55:27,342 | INFO     | fitting pss+swap vs Time
[2026-03-20 13:56:09] 2026-03-20 11:55:27,342 | INFO     | sum of square deviations: 814873350.4927523
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | sum of deviations: 3159030109.550726
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | mean x: 1774003485.5072465
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | mean y: 2386868.4492753623
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | intersect: -6874915502.252282
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | chi2: 1.369224697237281
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | sum of square deviations: 729467402.9924784
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | sum of deviations: 2908537717.015039
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | mean x: 1774003333.0075188
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | mean y: 2386420.984962406
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | intersect: -7070932527.875541
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | chi2: 1.3695471701823048
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | current chi2=1.3695471701823048 (change=-0.023551499302810253 %)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | right removable region: 132
[2026-03-20 13:56:09] 2026-03-20 11:55:27,343 | INFO     | sum of square deviations: 729466792.9924784
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | sum of deviations: -7405443463.360902
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | mean x: 1774003638.0075188
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | mean y: 2405007.360902256
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | intersect: 18011838433.615166
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | chi2: 0.13028934637857317
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | current chi2=0.13028934637857317 (change=90.48444374093884 %)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | sum of square deviations: 650246397.9921875
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | sum of deviations: -101749236.7578125
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | mean x: 1774003790.5078125
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | mean y: 2390932.2578125
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | intersect: 279983445.26056033
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | chi2: 0.030728705598714826
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | current chi2=0.030728705598714826 (change=76.41502820236087 %)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | sum of square deviations: 576979602.9918702
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | sum of deviations: 1221505399.121951
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | mean x: 1774003943.00813
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | mean y: 2388281.8780487804
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | intersect: -3753299758.412336
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | chi2: 0.0009014389749184133
[2026-03-20 13:56:09] 2026-03-20 11:55:27,344 | INFO     | current chi2=0.0009014389749184133 (change=97.06645965928315 %)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | sum of square deviations: 509433845.49152595
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | sum of deviations: 1170254976.576271
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | mean x: 1774004095.5084746
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | mean y: 2388395.4237288134
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | intersect: -4072796517.4130297
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | chi2: 0.0008684256125527167
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | current chi2=0.0008684256125527167 (change=3.662295871851399 %)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | left removable region: 40
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | sum of square deviations: 241429643.0
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | sum of deviations: 704385879.5000001
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | mean x: 1774004522.5
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | mean y: 2388530.097826087
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | intersect: -5173379119.188473
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | chi2: 0.00040259458123631834
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | current memory leak: 2.92 B/s (using 92 data points, chi2=0.00)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,345 | INFO     | could have reported an average CPU frequency of 2824 MHz (8 samples)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | ..............................
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . Timing measurements:
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . get job = 0 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . initial setup = 3 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . payload setup = 3 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . stage-in = 0 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . payload execution = 8415 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . stage-out = 0 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | . log creation = 0 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,346 | INFO     | ..............................
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | 
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | job summary report
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | --------------------------------------------------
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | PanDA job id: 7056975510
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | task id: 49181388
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | errors: (none)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | pilot state: finished 
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | transexitcode: 0
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | exeerrorcode: 0
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | exeerrordiag: 
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | exitcode: 0
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | exitmsg: OK
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | cpuconsumptiontime: 32814 s
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | nevents: 400
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | neventsw: 0
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | pid: 2900804
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | pgrp: 2900804
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | corecount: 4
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | event service: False
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | sizes: {0: 2280301, 10: 2280301, 8423: 2308355, 8424: 2317353, 8425: 2317409, 8426: 2317603}
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | --------------------------------------------------
[2026-03-20 13:56:09] 2026-03-20 11:55:27,809 | INFO     | 
[2026-03-20 13:56:09] 2026-03-20 11:55:27,810 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,819 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,819 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 13:56:09] 2026-03-20 11:55:27,819 | INFO     | job 7056975510 has completed (purged errors)
[2026-03-20 13:56:09] 2026-03-20 11:55:27,819 | INFO     | overall cleanup function is called
[2026-03-20 13:56:09] 2026-03-20 11:55:28,825 | INFO     | --- collectZombieJob: --- 10, [2900804]
[2026-03-20 13:56:09] 2026-03-20 11:55:28,825 | INFO     | zombie collector waiting for pid 2900804
[2026-03-20 13:56:09] 2026-03-20 11:55:28,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 13:56:09] 2026-03-20 11:55:28,826 | INFO     | collected zombie processes
[2026-03-20 13:56:09] 2026-03-20 11:55:28,826 | INFO     | will attempt to kill all subprocesses of pid=2900804
[2026-03-20 13:56:09] 2026-03-20 11:55:28,918 | INFO     | process IDs to be killed: [2900804] (in reverse order)
[2026-03-20 13:56:09] 2026-03-20 11:55:28,949 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 13:56:09] 2026-03-20 11:55:28,949 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 13:56:09] 2026-03-20 11:55:28,952 | INFO     | did not find any defunct processes belonging to 2900804
[2026-03-20 13:56:09] 2026-03-20 11:55:28,954 | INFO     | did not find any defunct processes belonging to 2900804
[2026-03-20 13:56:09] 2026-03-20 11:55:28,954 | INFO     | ready for new job
[2026-03-20 13:56:09] 2026-03-20 11:55:28,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 13:56:09] 2026-03-20 11:55:28,955 | INFO     | **************************************
[2026-03-20 13:56:09] 2026-03-20 11:55:28,955 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-20 13:56:09] 2026-03-20 11:55:28,955 | INFO     | **************************************
[2026-03-20 13:56:09] 2026-03-20 11:55:28,955 | INFO     | 
[2026-03-20 13:56:09] 2026-03-20 11:55:28,956 | INFO     | architecture information:
[2026-03-20 13:56:09] 2026-03-20 11:55:28,956 | INFO     | executing command: cat /etc/os-release
[2026-03-20 13:56:09] 2026-03-20 11:55:28,961 | INFO     | cat /etc/os-release:
[2026-03-20 13:56:09] NAME="CentOS Linux"
[2026-03-20 13:56:09] VERSION="7 (Core)"
[2026-03-20 13:56:09] ID="centos"
[2026-03-20 13:56:09] ID_LIKE="rhel fedora"
[2026-03-20 13:56:09] VERSION_ID="7"
[2026-03-20 13:56:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 13:56:09] ANSI_COLOR="0;31"
[2026-03-20 13:56:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 13:56:09] HOME_URL="https://www.centos.org/"
[2026-03-20 13:56:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 13:56:09] 
[2026-03-20 13:56:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 13:56:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 13:56:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 13:56:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 13:56:09] 
[2026-03-20 13:56:09] 2026-03-20 11:55:28,961 | INFO     | **************************************
[2026-03-20 13:56:09] 2026-03-20 11:55:29,464 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-03-20 13:56:09] 2026-03-20 11:55:29,471 | INFO     | sufficient remaining disk space (62119739392 B)
[2026-03-20 13:56:09] 2026-03-20 11:55:29,471 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 13:56:09] 2026-03-20 11:55:29,471 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 13:56:09] 2026-03-20 11:55:29,471 | INFO     | update_server=False
[2026-03-20 13:56:09] 2026-03-20 11:55:29,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 13:56:09] 2026-03-20 11:55:29,720 | INFO     | all data control threads have been joined
[2026-03-20 13:56:09] 2026-03-20 11:55:30,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 13:56:09] 2026-03-20 11:55:30,022 | INFO     | aborting loop
[2026-03-20 13:56:09] 2026-03-20 11:55:30,199 | INFO     | all job control threads have been joined
[2026-03-20 13:56:09] 2026-03-20 11:55:30,313 | INFO     | all payload control threads have been joined
[2026-03-20 13:56:09] 2026-03-20 11:55:30,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 13:56:09] 2026-03-20 11:55:30,476 | INFO     | [job] retrieve thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:30,725 | INFO     | [data] control thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,027 | INFO     | [job] job monitor thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,204 | INFO     | [job] control thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,313 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,318 | INFO     | [payload] control thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,503 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,565 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,620 | INFO     | [payload] failed_post thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,693 | INFO     | [job] validate thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,720 | INFO     | [data] copytool_in thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,756 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,884 | INFO     | [payload] validate_post thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:31,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 13:56:09] 2026-03-20 11:55:32,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 13:56:09] 2026-03-20 11:55:32,468 | INFO     | [data] copytool_out thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:33,386 | INFO     | [job] queue monitor thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:35,986 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 13:56:09] 2026-03-20 11:55:59,854 | INFO     | PID=2896151 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 13:56:09] 2026-03-20 11:55:59,855 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 13:56:09] 2026-03-20 11:55:59,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 13:56:09] 2026-03-20 11:55:59,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 13:56:09] 2026-03-20 11:56:02,382 | INFO     | [monitor] cgroup control has ended
[2026-03-20 13:56:09] 2026-03-20 11:56:04,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511359952704)>', '<ExcThread(monitor, started 140510576498432)>']
[2026-03-20 13:56:09] 2026-03-20 11:56:04,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 13:56:09] 2026-03-20 11:56:04,880 | INFO     | [monitor] control thread has ended
[2026-03-20 13:56:09] 2026-03-20 11:56:09,425 | INFO     | all workflow threads have been joined
[2026-03-20 13:56:09] 2026-03-20 11:56:09,425 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 13:56:09] 2026-03-20 11:56:09,426 | INFO     | traces error code: 0
[2026-03-20 13:56:09] 2026-03-20 11:56:09,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 13:56:09] 2026-03-20 11:56:09,466 [wrapper] ==== pilot stdout END ====
[2026-03-20 13:56:09] 2026-03-20 11:56:09,468 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 13:56:09] 2026-03-20 11:56:09,469 [wrapper] pilotpid: 2896151
[2026-03-20 13:56:09] 2026-03-20 11:56:09,471 [wrapper] Pilot exit status: 0
[2026-03-20 13:56:09] 2026-03-20 11:56:09,476 [wrapper] pandaids: 7056975510
[2026-03-20 13:56:09] 2026-03-20 11:56:09,498 [wrapper] cleanup supervisor_pilot 2995237 2896152
[2026-03-20 13:56:09] 2026-03-20 11:56:09,499 [wrapper] Test setup, not cleaning
[2026-03-20 13:56:09] 2026-03-20 11:56:09,501 [wrapper] apfmon messages muted
[2026-03-20 13:56:09] 2026-03-20 11:56:09,502 [wrapper] ==== wrapper stdout END ====
[2026-03-20 13:56:09] 2026-03-20 11:56:09,504 [wrapper] ==== wrapper stderr END ====
[2026-03-20 13:56:09]  *** Error codes and diagnostics ***
[2026-03-20 13:56:09]     "exeErrorCode": 0,
[2026-03-20 13:56:09]     "exeErrorDiag": "",
[2026-03-20 13:56:09]     "pilotErrorCode": 0,
[2026-03-20 13:56:09]     "pilotErrorDiag": "",
[2026-03-20 13:56:09]  *** Listing of results directory ***
[2026-03-20 13:56:09] total 480960
[2026-03-20 13:56:09] -rw-r--r-- 1 ek ek    585013 Mar 16 19:24 pilot3.tar.gz
[2026-03-20 13:56:09] -rwx------ 1 ek ek     36322 Mar 16 19:27 runpilot2-wrapper.sh
[2026-03-20 13:56:09] -rw-r--r-- 1 ek ek      5111 Mar 16 19:30 queuedata.json
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek       100 Mar 20 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 13:56:09] -rwxr-xr-x 1 ek ek      7986 Mar 20 11:34 run_atlas
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek       105 Mar 20 11:34 job.xml
[2026-03-20 13:56:09] -rw-r--r-- 2 ek ek 241211467 Mar 20 11:34 EVNT.49134998._000019.pool.root.1
[2026-03-20 13:56:09] drwxrwx--x 2 ek ek      4096 Mar 20 11:34 shared
[2026-03-20 13:56:09] -rw-r--r-- 2 ek ek    597539 Mar 20 11:34 input.tar.gz
[2026-03-20 13:56:09] -rw-r--r-- 2 ek ek     15845 Mar 20 11:34 start_atlas.sh
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek         0 Mar 20 11:34 boinc_setup_complete
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek      9842 Mar 20 11:34 init_data.xml
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek         0 Mar 20 11:34 boinc_lockfile
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek      2612 Mar 20 11:34 pandaJob.out
[2026-03-20 13:56:09] -rw------- 1 ek ek        50 Mar 20 11:34 setup.sh.local
[2026-03-20 13:56:09] -rw------- 1 ek ek   1010749 Mar 20 11:34 agis_schedconf.cvmfs.json
[2026-03-20 13:56:09] -rw------- 1 ek ek   1511579 Mar 20 11:34 agis_ddmendpoints.agis.ALL.json
[2026-03-20 13:56:09] -rw------- 1 ek ek       433 Mar 20 11:34 workernode_map.json
[2026-03-20 13:56:09] drwx------ 5 ek ek      4096 Mar 20 11:34 pilot3
[2026-03-20 13:56:09] -rw------- 1 ek ek 244319129 Mar 20 13:55 HITS.49181388._000453.pool.root.1
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek       529 Mar 20 13:55 boinc_task_state.xml
[2026-03-20 13:56:09] -rw------- 1 ek ek      1021 Mar 20 13:55 memory_monitor_summary.json
[2026-03-20 13:56:09] -rw------- 1 ek ek    309278 Mar 20 13:55 log.49181388._000453.job.log.tgz.1
[2026-03-20 13:56:09] -rw------- 1 ek ek      6309 Mar 20 13:55 heartbeat.json
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek      8192 Mar 20 13:55 boinc_mmap_file
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek        27 Mar 20 13:55 wrapper_checkpoint.txt
[2026-03-20 13:56:09] -rw------- 1 ek ek        95 Mar 20 13:55 pilot_heartbeat.json
[2026-03-20 13:56:09] -rw------- 1 ek ek      4744 Mar 20 13:56 pilotlog.txt
[2026-03-20 13:56:09] -rw------- 1 ek ek   1200687 Mar 20 13:56 log.49181388._000453.job.log.1
[2026-03-20 13:56:09] -rw------- 1 ek ek       357 Mar 20 13:56 output.list
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek       620 Mar 20 13:56 runtime_log
[2026-03-20 13:56:09] -rw------- 1 ek ek   1525760 Mar 20 13:56 result.tar.gz
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek      9501 Mar 20 13:56 runtime_log.err
[2026-03-20 13:56:09] -rw------- 1 ek ek       663 Mar 20 13:56 pihLDmKuQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9evLDmvAc0dn.diag
[2026-03-20 13:56:09] -rw-rw-r-- 1 ek ek     20813 Mar 20 13:56 stderr.txt
[2026-03-20 13:56:09] HITS file was successfully produced:
[2026-03-20 13:56:09] -rw------- 1 ek ek 244319129 Mar 20 13:55 shared/HITS.pool.root.1
[2026-03-20 13:56:09]  *** Contents of shared directory: ***
[2026-03-20 13:56:09] total 476256
[2026-03-20 13:56:09] -rw-r--r-- 2 ek ek 241211467 Mar 20 11:34 ATLAS.root_0
[2026-03-20 13:56:09] -rw-r--r-- 2 ek ek    597539 Mar 20 11:34 input.tar.gz
[2026-03-20 13:56:09] -rw-r--r-- 2 ek ek     15845 Mar 20 11:34 start_atlas.sh
[2026-03-20 13:56:09] -rw------- 1 ek ek 244319129 Mar 20 13:55 HITS.pool.root.1
[2026-03-20 13:56:09] -rw------- 1 ek ek   1525760 Mar 20 13:56 result.tar.gz
13:56:11 (2892153): run_atlas exited; CPU time 32893.520577
13:56:11 (2892153): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN