Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:19 (4099313): wrapper (7.7.26015): starting
23:47:19 (4099313): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 23:47:19] Arguments: --nthreads 12
[2026-03-19 23:47:19] Threads: 12
[2026-03-19 23:47:19] Checking for CVMFS
[2026-03-19 23:47:19] No cvmfs_config command found, will try listing directly
[2026-03-19 23:47:19] CVMFS is ok
[2026-03-19 23:47:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 23:47:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 23:47:19] Further information can be found at the LHC@home message board.
[2026-03-19 23:47:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 23:47:19] Checking for apptainer binary...
[2026-03-19 23:47:19] which: no apptainer in ((null))
[2026-03-19 23:47:19] apptainer is not installed, using version from CVMFS
[2026-03-19 23:47:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 23:47:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-19 23:47:19] apptainer works
[2026-03-19 23:47:19] Set ATHENA_PROC_NUMBER=12
[2026-03-19 23:47:19] Set ATHENA_CORE_NUMBER=12
[2026-03-19 23:47:19] Starting ATLAS job with PandaID=7040758876
[2026-03-19 23:47:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-20 00:14:43]  *** The last 200 lines of the pilot log: ***
[2026-03-20 00:14:43]  is_tar=False
[2026-03-20 00:14:43]  lfn=log.48955006._034071.job.log.tgz.1
[2026-03-20 00:14:43]  mtime=0
[2026-03-20 00:14:43]  protocol_id=None
[2026-03-20 00:14:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-20 00:14:43]  replicas=None
[2026-03-20 00:14:43]  scope=mc23_13p6TeV
[2026-03-20 00:14:43]  status=None
[2026-03-20 00:14:43]  status_code=0
[2026-03-20 00:14:43]  storage_token=
[2026-03-20 00:14:43]  surl=/var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758876/log.48955006._034071.job.log.tgz.1
[2026-03-20 00:14:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/ea/log.48955006._034071.job.log.tgz.1
[2026-03-20 00:14:43]  workdir=None
[2026-03-20 00:14:43] ]
[2026-03-20 00:14:43] 2026-03-19 23:11:53,150 | INFO     | transferring file log.48955006._034071.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758876/log.48955006._034071.job.log.tgz.1 to /var/lib/b
[2026-03-20 00:14:43] 2026-03-19 23:11:53,150 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758876/log.48955006._034071.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/2/lo
[2026-03-20 00:14:43] 2026-03-19 23:11:53,163 | INFO     | adding to output.list: log.48955006._034071.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/ea/log.48955006._034071.job.log.tg
[2026-03-20 00:14:43] 2026-03-19 23:11:53,163 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-20 00:14:43] 2026-03-19 23:11:53,163 | INFO     | summary of transferred files:
[2026-03-20 00:14:43] 2026-03-19 23:11:53,163 | INFO     |  -- lfn=log.48955006._034071.job.log.tgz.1, status_code=0, status=transferred
[2026-03-20 00:14:43] 2026-03-19 23:11:53,164 | INFO     | stage-out finished correctly
[2026-03-20 00:14:43] 2026-03-19 23:11:53,193 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-20 00:14:43] 2026-03-19 23:11:53,394 | INFO     | PID=4104095 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 00:14:43] 2026-03-19 23:11:53,394 | INFO     | .. there are 5 such processes running
[2026-03-20 00:14:43] 2026-03-19 23:11:53,759 | WARNING  | process 4109883 can no longer be monitored (due to stat problems) - aborting
[2026-03-20 00:14:43] 2026-03-19 23:11:53,759 | INFO     | using path: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758876/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 00:14:43] 2026-03-19 23:11:53,977 | INFO     | number of running child processes to parent process 4109883: 1
[2026-03-20 00:14:43] 2026-03-19 23:11:53,977 | INFO     | maximum number of monitored processes: 6
[2026-03-20 00:14:43] 2026-03-19 23:11:54,395 | INFO     | time since job start (1463s) is within the limit (349056.0s)
[2026-03-20 00:14:43] 2026-03-19 23:11:55,986 | INFO     | job 7040758876 has state=finished
[2026-03-20 00:14:43] 2026-03-19 23:11:55,987 | INFO     | preparing for final server update for job 7040758876 in state='finished'
[2026-03-20 00:14:43] 2026-03-19 23:11:55,987 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758876/jobReport.json
[2026-03-20 00:14:43] 2026-03-19 23:11:55,989 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/2/workernode_map.json
[2026-03-20 00:14:43] 2026-03-19 23:11:55,989 | INFO     | this job has now completed (state=finished)
[2026-03-20 00:14:43] 2026-03-19 23:11:55,989 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-20 00:14:43] 2026-03-19 23:11:55,989 | INFO     | log transfer has been attempted: DONE
[2026-03-20 00:14:43] 2026-03-19 23:11:55,989 | INFO     | job 7040758876 has finished - writing final server update
[2026-03-20 00:14:43] 2026-03-19 23:11:55,989 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1359074/.job.ad'
[2026-03-20 00:14:43] 2026-03-19 23:11:55,989 | INFO     | total number of processed events: 400 (read)
[2026-03-20 00:14:43] 2026-03-19 23:11:56,005 | INFO     | using path: /var/lib/boinc/var/slot96/slots/2/PanDA_Pilot-7040758876/memory_monitor_summary.json (trf name=prmon)
[2026-03-20 00:14:43] 2026-03-19 23:11:56,005 | INFO     | extracted standard info from prmon json
[2026-03-20 00:14:43] 2026-03-19 23:11:56,005 | INFO     | extracted standard memory fields from prmon json
[2026-03-20 00:14:43] 2026-03-19 23:11:56,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | INFO     | fitting pss+swap vs Time
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | INFO     | sum of square deviations: 1518168.0
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | INFO     | sum of deviations: -193894173.0
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | INFO     | mean x: 1773961266.0
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | INFO     | mean y: 2758000.588235294
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | INFO     | intersect: 226565794901.05182
[2026-03-20 00:14:43] 2026-03-19 23:11:56,006 | INFO     | chi2: 0.0020713069288681783
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | current memory leak: -127.72 B/s (using 17 data points, chi2=0.00)
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | could have reported an average CPU frequency of 3613 MHz (4 samples)
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | ..............................
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . Timing measurements:
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . get job = 0 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . initial setup = 4 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . payload setup = 6 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . stage-in = 0 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . payload execution = 1440 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . stage-out = 0 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | . log creation = 0 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,007 | INFO     | ..............................
[2026-03-20 00:14:43] 2026-03-19 23:11:56,047 | INFO     | 
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | job summary report
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | --------------------------------------------------
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | PanDA job id: 7040758876
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | task id: 48955006
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | errors: (none)
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | pilot state: finished 
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | transexitcode: 0
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | exeerrorcode: 0
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | exeerrordiag: 
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | exitcode: 0
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | exitmsg: OK
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | cpuconsumptiontime: 15004 s
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | nevents: 400
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | neventsw: 0
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | pid: 4109883
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | pgrp: 4109883
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | corecount: 12
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | event service: False
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | sizes: {0: 2279134, 1: 2280263, 11: 2280263, 1450: 2305029, 1451: 2314104, 1454: 2314242}
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | --------------------------------------------------
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | 
[2026-03-20 00:14:43] 2026-03-19 23:11:56,048 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/2
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | job 7040758876 has completed (purged errors)
[2026-03-20 00:14:43] 2026-03-19 23:11:56,066 | INFO     | overall cleanup function is called
[2026-03-20 00:14:43] 2026-03-19 23:11:57,072 | INFO     | --- collectZombieJob: --- 10, [4109883]
[2026-03-20 00:14:43] 2026-03-19 23:11:57,072 | INFO     | zombie collector waiting for pid 4109883
[2026-03-20 00:14:43] 2026-03-19 23:11:57,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-20 00:14:43] 2026-03-19 23:11:57,072 | INFO     | collected zombie processes
[2026-03-20 00:14:43] 2026-03-19 23:11:57,072 | INFO     | will attempt to kill all subprocesses of pid=4109883
[2026-03-20 00:14:43] 2026-03-19 23:11:57,290 | INFO     | process IDs to be killed: [4109883] (in reverse order)
[2026-03-20 00:14:43] 2026-03-19 23:11:57,396 | WARNING  | found no corresponding commands to process id(s)
[2026-03-20 00:14:43] 2026-03-19 23:11:57,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-20 00:14:43] 2026-03-19 23:11:57,416 | INFO     | did not find any defunct processes belonging to 4109883
[2026-03-20 00:14:43] 2026-03-19 23:11:57,429 | INFO     | did not find any defunct processes belonging to 4109883
[2026-03-20 00:14:43] 2026-03-19 23:11:57,429 | INFO     | ready for new job
[2026-03-20 00:14:43] 2026-03-19 23:11:57,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-20 00:14:43] 2026-03-19 23:11:57,430 | INFO     | **************************************
[2026-03-20 00:14:43] 2026-03-19 23:11:57,430 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-20 00:14:43] 2026-03-19 23:11:57,430 | INFO     | **************************************
[2026-03-20 00:14:43] 2026-03-19 23:11:57,430 | INFO     | 
[2026-03-20 00:14:43] 2026-03-19 23:11:57,434 | INFO     | architecture information:
[2026-03-20 00:14:43] 2026-03-19 23:11:57,434 | INFO     | executing command: cat /etc/os-release
[2026-03-20 00:14:43] 2026-03-19 23:11:57,449 | INFO     | cat /etc/os-release:
[2026-03-20 00:14:43] NAME="CentOS Linux"
[2026-03-20 00:14:43] VERSION="7 (Core)"
[2026-03-20 00:14:43] ID="centos"
[2026-03-20 00:14:43] ID_LIKE="rhel fedora"
[2026-03-20 00:14:43] VERSION_ID="7"
[2026-03-20 00:14:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-20 00:14:43] ANSI_COLOR="0;31"
[2026-03-20 00:14:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-20 00:14:43] HOME_URL="https://www.centos.org/"
[2026-03-20 00:14:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-20 00:14:43] 
[2026-03-20 00:14:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-20 00:14:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-20 00:14:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-20 00:14:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-20 00:14:43] 
[2026-03-20 00:14:43] 2026-03-19 23:11:57,450 | INFO     | **************************************
[2026-03-20 00:14:43] 2026-03-19 23:11:57,953 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/2
[2026-03-20 00:14:43] 2026-03-19 23:11:57,971 | INFO     | sufficient remaining disk space (255331401728 B)
[2026-03-20 00:14:43] 2026-03-19 23:11:57,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-20 00:14:43] 2026-03-19 23:11:57,972 | INFO     | current server update state: UPDATING_FINAL
[2026-03-20 00:14:43] 2026-03-19 23:11:57,972 | INFO     | update_server=False
[2026-03-20 00:14:43] 2026-03-19 23:11:57,972 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-20 00:14:43] 2026-03-19 23:11:57,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-20 00:14:43] 2026-03-19 23:11:57,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-20 00:14:43] 2026-03-19 23:11:57,972 | INFO     | aborting loop
[2026-03-20 00:14:43] 2026-03-19 23:11:58,056 | INFO     | all data control threads have been joined
[2026-03-20 00:14:43] 2026-03-19 23:11:58,210 | INFO     | all payload control threads have been joined
[2026-03-20 00:14:43] 2026-03-19 23:11:58,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-20 00:14:43] 2026-03-19 23:11:58,976 | INFO     | [job] queue monitor thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:58,976 | INFO     | [job] retrieve thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:58,977 | INFO     | [job] job monitor thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,038 | INFO     | [payload] failed_post thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,062 | INFO     | [data] control thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,214 | INFO     | [payload] control thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-20 00:14:43] 2026-03-19 23:11:59,361 | INFO     | [job] validate thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,450 | INFO     | all job control threads have been joined
[2026-03-20 00:14:43] 2026-03-19 23:11:59,509 | INFO     | [job] create_data_payload thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,663 | INFO     | [payload] validate_pre thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,750 | INFO     | [payload] execute_payloads thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:11:59,826 | INFO     | [data] copytool_in thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:12:00,201 | INFO     | [payload] validate_post thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:12:00,456 | INFO     | [job] control thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:12:00,707 | INFO     | [data] copytool_out thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:12:03,233 | INFO     | [data] queue_monitor thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:12:08,819 | INFO     | job.realtimelogging is not enabled
[2026-03-20 00:14:43] 2026-03-19 23:12:09,825 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-20 00:14:43] 2026-03-19 23:12:27,776 | INFO     | PID=4104095 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-20 00:14:43] 2026-03-19 23:12:27,778 | INFO     | .. there are 5 such processes running
[2026-03-20 00:14:43] 2026-03-19 23:12:27,779 | INFO     | found 0 job(s) in 20 queues
[2026-03-20 00:14:43] 2026-03-19 23:12:27,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-20 00:14:43] 2026-03-19 23:12:27,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-20 00:14:43] 2026-03-19 23:12:33,278 | INFO     | [monitor] cgroup control has ended
[2026-03-20 00:14:43] 2026-03-19 23:12:34,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22822336427840)>', '<ExcThread(monitor, started 22822090176256)>']
[2026-03-20 00:14:43] 2026-03-19 23:12:34,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-20 00:14:43] 2026-03-19 23:12:34,815 | INFO     | [monitor] control thread has ended
[2026-03-20 00:14:43] 2026-03-19 23:12:39,309 | INFO     | all workflow threads have been joined
[2026-03-20 00:14:43] 2026-03-19 23:12:39,309 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-20 00:14:43] 2026-03-19 23:12:39,309 | INFO     | traces error code: 0
[2026-03-20 00:14:43] 2026-03-19 23:12:39,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-20 00:14:43] 2026-03-19 23:12:39,417 [wrapper] ==== pilot stdout END ====
[2026-03-20 00:14:43] 2026-03-19 23:12:39,418 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-20 00:14:43] 2026-03-19 23:12:39,419 [wrapper] pilotpid: 4104095
[2026-03-20 00:14:43] 2026-03-19 23:12:39,420 [wrapper] Pilot exit status: 0
[2026-03-20 00:14:43] 2026-03-19 23:12:39,424 [wrapper] pandaids: 7040758876
[2026-03-20 00:14:43] 2026-03-19 23:12:39,500 [wrapper] cleanup supervisor_pilot 4145849 4104096
[2026-03-20 00:14:43] 2026-03-19 23:12:39,502 [wrapper] Test setup, not cleaning
[2026-03-20 00:14:43] 2026-03-19 23:12:39,503 [wrapper] apfmon messages muted
[2026-03-20 00:14:43] 2026-03-19 23:12:39,504 [wrapper] ==== wrapper stdout END ====
[2026-03-20 00:14:43] 2026-03-19 23:12:39,505 [wrapper] ==== wrapper stderr END ====
[2026-03-20 00:14:43]  *** Error codes and diagnostics ***
[2026-03-20 00:14:43]     "exeErrorCode": 0,
[2026-03-20 00:14:43]     "exeErrorDiag": "",
[2026-03-20 00:14:43]     "pilotErrorCode": 0,
[2026-03-20 00:14:43]     "pilotErrorDiag": "",
[2026-03-20 00:14:43]  *** Listing of results directory ***
[2026-03-20 00:14:43] total 622316
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc    584627 Mar  9 09:26 pilot3.tar.gz
[2026-03-20 00:14:43] -rwx------. 1 boinc boinc     36322 Mar  9 09:26 runpilot2-wrapper.sh
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc      5111 Mar  9 09:27 queuedata.json
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc       100 Mar 19 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-20 00:14:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 22:19 run_atlas
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc       105 Mar 19 22:19 job.xml
[2026-03-20 00:14:43] -rw-r--r--. 2 boinc boinc 444224634 Mar 19 23:47 EVNT.46701403._000682.pool.root.1
[2026-03-20 00:14:43] -rw-r--r--. 2 boinc boinc     15845 Mar 19 23:47 start_atlas.sh
[2026-03-20 00:14:43] drwxrwx--x. 2 boinc boinc      4096 Mar 19 23:47 shared
[2026-03-20 00:14:43] -rw-r--r--. 2 boinc boinc    597960 Mar 19 23:47 input.tar.gz
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc      6709 Mar 19 23:47 init_data.xml
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc         0 Mar 19 23:47 boinc_lockfile
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc      2561 Mar 19 23:47 pandaJob.out
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc   1010740 Mar 19 23:47 agis_schedconf.cvmfs.json
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc   1511579 Mar 19 23:47 agis_ddmendpoints.agis.ALL.json
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc       444 Mar 19 23:47 workernode_map.json
[2026-03-20 00:14:43] drwx------. 5 boinc boinc      4096 Mar 19 23:47 pilot3
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc 187933742 Mar 20 00:11 HITS.48955006._034071.pool.root.1
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc       529 Mar 20 00:11 boinc_task_state.xml
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc      1027 Mar 20 00:11 memory_monitor_summary.json
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc    323157 Mar 20 00:11 log.48955006._034071.job.log.tgz.1
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc      6361 Mar 20 00:11 heartbeat.json
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc        95 Mar 20 00:12 pilot_heartbeat.json
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc      4901 Mar 20 00:12 pilotlog.txt
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc    253835 Mar 20 00:12 log.48955006._034071.job.log.1
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc       357 Mar 20 00:12 output.list
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc       620 Mar 20 00:12 runtime_log
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc    593920 Mar 20 00:12 result.tar.gz
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc      9206 Mar 20 00:12 runtime_log.err
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc       659 Mar 20 00:12 TiiNDm27kJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPIZLDm0qZEYm.diag
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc        26 Mar 20 00:14 wrapper_checkpoint.txt
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc      8192 Mar 20 00:14 boinc_mmap_file
[2026-03-20 00:14:43] -rw-r--r--. 1 boinc boinc     21521 Mar 20 00:14 stderr.txt
[2026-03-20 00:14:43] HITS file was successfully produced:
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc 187933742 Mar 20 00:11 shared/HITS.pool.root.1
[2026-03-20 00:14:43]  *** Contents of shared directory: ***
[2026-03-20 00:14:43] total 618536
[2026-03-20 00:14:43] -rw-r--r--. 2 boinc boinc 444224634 Mar 19 23:47 ATLAS.root_0
[2026-03-20 00:14:43] -rw-r--r--. 2 boinc boinc     15845 Mar 19 23:47 start_atlas.sh
[2026-03-20 00:14:43] -rw-r--r--. 2 boinc boinc    597960 Mar 19 23:47 input.tar.gz
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc 187933742 Mar 20 00:11 HITS.pool.root.1
[2026-03-20 00:14:43] -rw-------. 1 boinc boinc    593920 Mar 20 00:12 result.tar.gz
00:14:44 (4099313): run_atlas exited; CPU time 15037.933976
00:14:44 (4099313): called boinc_finish(0)

</stderr_txt>
]]>

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