Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:07:48 (928): wrapper (7.7.26015): starting
16:07:48 (928): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 16:07:48] Arguments: --nthreads 8
[2026-03-17 16:07:48] Threads: 8
[2026-03-17 16:07:48] Checking for CVMFS
[2026-03-17 16:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 16:07:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 16:07:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 16:07:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 16:07:48] 2.11.0.0 6744 18898 65192 157375 2 11 3724515 4096000 1834 130560 0 2362517 99.699 1324224 268 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-17 16:07:48] CVMFS is ok
[2026-03-17 16:07:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 16:07:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 16:07:48] Further information can be found at the LHC@home message board.
[2026-03-17 16:07:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 16:07:48] Checking for apptainer binary...
[2026-03-17 16:07:48] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-17 16:07:48] apptainer is not installed, using version from CVMFS
[2026-03-17 16:07:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 16:07:48] WARNING: Environment variable TMPDIR already has value [/tmp/job_11327107/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node149
[2026-03-17 16:07:48] apptainer works
[2026-03-17 16:07:48] Set ATHENA_PROC_NUMBER=8
[2026-03-17 16:07:48] Set ATHENA_CORE_NUMBER=8
[2026-03-17 16:07:48] Starting ATLAS job with PandaID=7048464499
[2026-03-17 16:07:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11327107/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 17:05:07]  *** The last 200 lines of the pilot log: ***
[2026-03-17 17:05:07]  filetype=log
[2026-03-17 17:05:07]  guid=dad8ace2-3169-409b-b261-0ef0e232d329
[2026-03-17 17:05:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-17 17:05:07]  is_altstaged=None
[2026-03-17 17:05:07]  is_tar=False
[2026-03-17 17:05:07]  lfn=log.48966988._025243.job.log.tgz.1
[2026-03-17 17:05:07]  mtime=0
[2026-03-17 17:05:07]  protocol_id=None
[2026-03-17 17:05:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-17 17:05:07]  replicas=None
[2026-03-17 17:05:07]  scope=mc23_13p6TeV
[2026-03-17 17:05:07]  status=None
[2026-03-17 17:05:07]  status_code=0
[2026-03-17 17:05:07]  storage_token=
[2026-03-17 17:05:07]  surl=/tmp/job_11327107/atlas/pilot/slots/0/PanDA_Pilot-7048464499/log.48966988._025243.job.log.tgz.1
[2026-03-17 17:05:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/3c/log.48966988._025243.job.log.tgz.1
[2026-03-17 17:05:07]  workdir=None
[2026-03-17 17:05:07] ]
[2026-03-17 17:05:07] 2026-03-17 16:04:33,868 | INFO     | time since job start (3398s) is within the limit (349056.0s)
[2026-03-17 17:05:07] 2026-03-17 16:04:33,875 | INFO     | transferring file log.48966988._025243.job.log.tgz.1 from /tmp/job_11327107/atlas/pilot/slots/0/PanDA_Pilot-7048464499/log.48966988._025243.job.log.tgz.1 to /tmp/j
[2026-03-17 17:05:07] 2026-03-17 16:04:33,876 | INFO     | executing command: /usr/bin/env mv /tmp/job_11327107/atlas/pilot/slots/0/PanDA_Pilot-7048464499/log.48966988._025243.job.log.tgz.1 /tmp/job_11327107/atlas/pilot/sl
[2026-03-17 17:05:07] 2026-03-17 16:04:33,884 | INFO     | adding to output.list: log.48966988._025243.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/3c/log.48966988._025243.job.log.tg
[2026-03-17 17:05:07] 2026-03-17 16:04:33,884 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-17 17:05:07] 2026-03-17 16:04:33,884 | INFO     | summary of transferred files:
[2026-03-17 17:05:07] 2026-03-17 16:04:33,884 | INFO     |  -- lfn=log.48966988._025243.job.log.tgz.1, status_code=0, status=transferred
[2026-03-17 17:05:07] 2026-03-17 16:04:33,884 | INFO     | stage-out finished correctly
[2026-03-17 17:05:07] 2026-03-17 16:04:35,839 | INFO     | monitor loop #259: job 0:7048464499 is in state 'finished'
[2026-03-17 17:05:07] 2026-03-17 16:04:35,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-17 17:05:07] 2026-03-17 16:04:35,879 | INFO     | time since job start (3400s) is within the limit (349056.0s)
[2026-03-17 17:05:07] 2026-03-17 16:04:36,010 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-17 17:05:07] 2026-03-17 16:04:37,501 | INFO     | job 7048464499 has state=finished
[2026-03-17 17:05:07] 2026-03-17 16:04:37,501 | INFO     | preparing for final server update for job 7048464499 in state='finished'
[2026-03-17 17:05:07] 2026-03-17 16:04:37,501 | INFO     | reading metadata from: /tmp/job_11327107/atlas/pilot/slots/0/PanDA_Pilot-7048464499/jobReport.json
[2026-03-17 17:05:07] 2026-03-17 16:04:37,502 | INFO     | added worker_node to metadata from /tmp/job_11327107/atlas/pilot/slots/0/workernode_map.json
[2026-03-17 17:05:07] 2026-03-17 16:04:37,502 | INFO     | this job has now completed (state=finished)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,502 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,502 | INFO     | log transfer has been attempted: DONE
[2026-03-17 17:05:07] 2026-03-17 16:04:37,502 | INFO     | job 7048464499 has finished - writing final server update
[2026-03-17 17:05:07] 2026-03-17 16:04:37,502 | INFO     | total number of processed events: 400 (read)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,521 | INFO     | using path: /tmp/job_11327107/atlas/pilot/slots/0/PanDA_Pilot-7048464499/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,521 | INFO     | extracted standard info from prmon json
[2026-03-17 17:05:07] 2026-03-17 16:04:37,521 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 17:05:07] 2026-03-17 16:04:37,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 17:05:07] 2026-03-17 16:04:37,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 17:05:07] 2026-03-17 16:04:37,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | fitting pss+swap vs Time
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | sum of square deviations: 36465800.0
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | sum of deviations: 106498130.99999996
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | mean x: 1773761860.0
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | mean y: 2502641.9183673467
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | intersect: -5177757298.329306
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | chi2: 0.0051036227127193535
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | current memory leak: 2.92 B/s (using 49 data points, chi2=0.01)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,522 | INFO     | could have reported an average CPU frequency of 2615 MHz (5 samples)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | ..............................
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . Timing measurements:
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . get job = 0 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . initial setup = 2 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . payload setup = 2 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . stage-in = 0 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . payload execution = 3380 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . stage-out = 0 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | . log creation = 0 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,523 | INFO     | ..............................
[2026-03-17 17:05:07] 2026-03-17 16:04:37,884 | INFO     | time since job start (3402s) is within the limit (349056.0s)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | 
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | job summary report
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | --------------------------------------------------
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | PanDA job id: 7048464499
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | task id: 48966988
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | errors: (none)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | pilot state: finished 
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | transexitcode: 0
[2026-03-17 17:05:07] 2026-03-17 16:04:37,957 | INFO     | exeerrorcode: 0
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | exeerrordiag: 
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | exitcode: 0
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | exitmsg: OK
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | cpuconsumptiontime: 24494 s
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | nevents: 400
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | neventsw: 0
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | pid: 12109
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | pgrp: 12109
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | corecount: 8
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | event service: False
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | sizes: {0: 2280395, 11: 2280395, 3386: 2306188, 3387: 2315216, 3390: 2315272, 3391: 2315498}
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | --------------------------------------------------
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | 
[2026-03-17 17:05:07] 2026-03-17 16:04:37,958 | INFO     | executing command: ls -lF /tmp/job_11327107/atlas/pilot/slots/0
[2026-03-17 17:05:07] 2026-03-17 16:04:37,967 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,967 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | job 7048464499 has completed (purged errors)
[2026-03-17 17:05:07] 2026-03-17 16:04:37,968 | INFO     | overall cleanup function is called
[2026-03-17 17:05:07] 2026-03-17 16:04:38,974 | INFO     | --- collectZombieJob: --- 10, [12109]
[2026-03-17 17:05:07] 2026-03-17 16:04:38,974 | INFO     | zombie collector waiting for pid 12109
[2026-03-17 17:05:07] 2026-03-17 16:04:38,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 17:05:07] 2026-03-17 16:04:38,974 | INFO     | collected zombie processes
[2026-03-17 17:05:07] 2026-03-17 16:04:38,975 | INFO     | will attempt to kill all subprocesses of pid=12109
[2026-03-17 17:05:07] 2026-03-17 16:04:39,083 | INFO     | process IDs to be killed: [12109] (in reverse order)
[2026-03-17 17:05:07] 2026-03-17 16:04:39,121 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 17:05:07] 2026-03-17 16:04:39,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 17:05:07] 2026-03-17 16:04:39,125 | INFO     | did not find any defunct processes belonging to 12109
[2026-03-17 17:05:07] 2026-03-17 16:04:39,128 | INFO     | did not find any defunct processes belonging to 12109
[2026-03-17 17:05:07] 2026-03-17 16:04:39,128 | INFO     | ready for new job
[2026-03-17 17:05:07] 2026-03-17 16:04:39,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 17:05:07] 2026-03-17 16:04:39,129 | INFO     | **************************************
[2026-03-17 17:05:07] 2026-03-17 16:04:39,129 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-17 17:05:07] 2026-03-17 16:04:39,129 | INFO     | **************************************
[2026-03-17 17:05:07] 2026-03-17 16:04:39,129 | INFO     | 
[2026-03-17 17:05:07] 2026-03-17 16:04:39,143 | INFO     | architecture information:
[2026-03-17 17:05:07] 2026-03-17 16:04:39,143 | INFO     | executing command: cat /etc/os-release
[2026-03-17 17:05:07] 2026-03-17 16:04:39,150 | INFO     | cat /etc/os-release:
[2026-03-17 17:05:07] NAME="CentOS Linux"
[2026-03-17 17:05:07] VERSION="7 (Core)"
[2026-03-17 17:05:07] ID="centos"
[2026-03-17 17:05:07] ID_LIKE="rhel fedora"
[2026-03-17 17:05:07] VERSION_ID="7"
[2026-03-17 17:05:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 17:05:07] ANSI_COLOR="0;31"
[2026-03-17 17:05:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 17:05:07] HOME_URL="https://www.centos.org/"
[2026-03-17 17:05:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 17:05:07] 
[2026-03-17 17:05:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 17:05:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 17:05:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 17:05:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 17:05:07] 
[2026-03-17 17:05:07] 2026-03-17 16:04:39,150 | INFO     | **************************************
[2026-03-17 17:05:07] 2026-03-17 16:04:39,652 | INFO     | executing command: df -mP /tmp/job_11327107/atlas/pilot/slots/0
[2026-03-17 17:05:07] 2026-03-17 16:04:39,658 | INFO     | sufficient remaining disk space (224131022848 B)
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | INFO     | update_server=False
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | INFO     | aborting loop
[2026-03-17 17:05:07] 2026-03-17 16:04:39,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 17:05:07] 2026-03-17 16:04:39,671 | INFO     | all payload control threads have been joined
[2026-03-17 17:05:07] 2026-03-17 16:04:39,718 | INFO     | all data control threads have been joined
[2026-03-17 17:05:07] 2026-03-17 16:04:40,664 | INFO     | [job] retrieve thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:40,664 | INFO     | [job] job monitor thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:40,677 | INFO     | [payload] control thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:40,723 | INFO     | [data] control thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:40,734 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:40,783 | INFO     | [payload] failed_post thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:40,902 | INFO     | all job control threads have been joined
[2026-03-17 17:05:07] 2026-03-17 16:04:41,091 | INFO     | [data] copytool_in thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:41,374 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:41,665 | INFO     | [data] copytool_out thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:41,907 | INFO     | [job] control thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:41,921 | INFO     | [payload] validate_post thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:41,971 | INFO     | [job] validate thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:42,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 17:05:07] 2026-03-17 16:04:42,161 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:42,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 17:05:07] 2026-03-17 16:04:43,585 | INFO     | [job] queue monitor thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:46,072 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:04:50,397 | INFO     | job.realtimelogging is not enabled
[2026-03-17 17:05:07] 2026-03-17 16:04:51,402 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 17:05:07] 2026-03-17 16:05:00,303 | INFO     | [monitor] cgroup control has ended
[2026-03-17 17:05:07] 2026-03-17 16:05:01,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-03-17 17:05:07] 2026-03-17 16:05:02,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 17:05:07] 2026-03-17 16:05:02,773 | INFO     | [monitor] control thread has ended
[2026-03-17 17:05:07] 2026-03-17 16:05:06,799 | INFO     | all workflow threads have been joined
[2026-03-17 17:05:07] 2026-03-17 16:05:06,799 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 17:05:07] 2026-03-17 16:05:06,799 | INFO     | traces error code: 0
[2026-03-17 17:05:07] 2026-03-17 16:05:06,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 17:05:07] 2026-03-17 16:05:06,848 [wrapper] ==== pilot stdout END ====
[2026-03-17 17:05:07] 2026-03-17 16:05:06,850 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 17:05:07] 2026-03-17 16:05:06,855 [wrapper] pilotpid: 5862
[2026-03-17 17:05:07] 2026-03-17 16:05:06,856 [wrapper] Pilot exit status: 0
[2026-03-17 17:05:07] 2026-03-17 16:05:06,865 [wrapper] pandaids: 7048464499
[2026-03-17 17:05:07] 2026-03-17 16:05:06,905 [wrapper] cleanup supervisor_pilot  9857 5863
[2026-03-17 17:05:07] 2026-03-17 16:05:06,906 [wrapper] Test setup, not cleaning
[2026-03-17 17:05:07] 2026-03-17 16:05:06,907 [wrapper] apfmon messages muted
[2026-03-17 17:05:07] 2026-03-17 16:05:06,908 [wrapper] ==== wrapper stdout END ====
[2026-03-17 17:05:07] 2026-03-17 16:05:06,909 [wrapper] ==== wrapper stderr END ====
[2026-03-17 17:05:07]  *** Error codes and diagnostics ***
[2026-03-17 17:05:07]     "exeErrorCode": 0,
[2026-03-17 17:05:07]     "exeErrorDiag": "",
[2026-03-17 17:05:07]     "pilotErrorCode": 0,
[2026-03-17 17:05:07]     "pilotErrorDiag": "",
[2026-03-17 17:05:07]  *** Listing of results directory ***
[2026-03-17 17:05:07] total 407816
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user    584627 Mar 10 07:40 pilot3.tar.gz
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      5111 Mar 10 07:41 queuedata.json
[2026-03-17 17:05:07] -rwx------ 1 mf493845 unix-user     36322 Mar 10 07:41 runpilot2-wrapper.sh
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user       100 Mar 17 15:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 17:05:07] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 17 15:13 run_atlas
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user       105 Mar 17 15:13 job.xml
[2026-03-17 17:05:07] -rw-r--r-- 2 mf493845 unix-user 212716285 Mar 17 16:07 EVNT.48966985._000996.pool.root.1
[2026-03-17 17:05:07] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 16:07 start_atlas.sh
[2026-03-17 17:05:07] drwxrwx--x 2 mf493845 unix-user       100 Mar 17 16:07 shared
[2026-03-17 17:05:07] -rw-r--r-- 2 mf493845 unix-user    597969 Mar 17 16:07 input.tar.gz
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      6391 Mar 17 16:07 init_data.xml
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user         0 Mar 17 16:07 boinc_setup_complete
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      8192 Mar 17 16:07 boinc_mmap_file
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user         0 Mar 17 16:07 boinc_lockfile
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      2591 Mar 17 16:07 pandaJob.out
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user   1010282 Mar 17 16:07 agis_schedconf.cvmfs.json
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user   1511579 Mar 17 16:07 agis_ddmendpoints.agis.ALL.json
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user       416 Mar 17 16:07 workernode_map.json
[2026-03-17 17:05:07] drwx------ 5 mf493845 unix-user       440 Mar 17 16:07 pilot3
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user 199326355 Mar 17 17:04 HITS.48966988._025243.pool.root.1
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      1017 Mar 17 17:04 memory_monitor_summary.json
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user    295227 Mar 17 17:04 log.48966988._025243.job.log.tgz.1
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      6305 Mar 17 17:04 heartbeat.json
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user        95 Mar 17 17:04 pilot_heartbeat.json
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      4634 Mar 17 17:05 pilotlog.txt
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user    530570 Mar 17 17:05 log.48966988._025243.job.log.1
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user       357 Mar 17 17:05 output.list
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user       620 Mar 17 17:05 runtime_log
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user    839680 Mar 17 17:05 result.tar.gz
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user      9219 Mar 17 17:05 runtime_log.err
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user       643 Mar 17 17:05 2FKODmtx5J9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqVcLDmwIYvDo.diag
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user     21713 Mar 17 17:05 stderr.txt
[2026-03-17 17:05:07] HITS file was successfully produced:
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user 199326355 Mar 17 17:04 shared/HITS.pool.root.1
[2026-03-17 17:05:07]  *** Contents of shared directory: ***
[2026-03-17 17:05:07] total 403808
[2026-03-17 17:05:07] -rw-r--r-- 2 mf493845 unix-user 212716285 Mar 17 16:07 ATLAS.root_0
[2026-03-17 17:05:07] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 16:07 start_atlas.sh
[2026-03-17 17:05:07] -rw-r--r-- 2 mf493845 unix-user    597969 Mar 17 16:07 input.tar.gz
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user 199326355 Mar 17 17:04 HITS.pool.root.1
[2026-03-17 17:05:07] -rw------- 1 mf493845 unix-user    839680 Mar 17 17:05 result.tar.gz
17:05:08 (928): run_atlas exited; CPU time 24545.899602
17:05:08 (928): called boinc_finish(0)

</stderr_txt>
]]>

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