Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:49:32 (9685): wrapper (7.7.26015): starting
17:49:32 (9685): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 17:49:32] Arguments: --nthreads 8
[2026-03-18 17:49:32] Threads: 8
[2026-03-18 17:49:32] Checking for CVMFS
[2026-03-18 17:49:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 17:49:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 17:49:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 17:49:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 17:49:36] 2.11.2.0 1190 132941 136184 157424 1 194 19149697 25165825 4455 130560 163 46166813 99.811 32993141 1098 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 17:49:36] CVMFS is ok
[2026-03-18 17:49:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 17:49:36] Checking for apptainer binary...
[2026-03-18 17:49:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 17:49:36] Running /usr/bin/apptainer --version
[2026-03-18 17:49:36] apptainer version 1.3.2-1.el7
[2026-03-18 17:49:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 17:49:43] cg-vwn395.simple-grid.lan
[2026-03-18 17:49:43] apptainer works
[2026-03-18 17:49:43] Set ATHENA_PROC_NUMBER=8
[2026-03-18 17:49:43] Set ATHENA_CORE_NUMBER=8
[2026-03-18 17:49:43] Starting ATLAS job with PandaID=7057165818
[2026-03-18 17:49:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 00:07:42]  *** The last 200 lines of the pilot log: ***
[2026-03-19 00:07:42] 2026-03-18 23:06:47,546 | INFO     | job 7057165818 has finished - writing final server update
[2026-03-19 00:07:42] 2026-03-18 23:06:47,546 | INFO     | total number of processed events: 400 (read)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,548 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7057165818/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,549 | INFO     | extracted standard info from prmon json
[2026-03-19 00:07:42] 2026-03-18 23:06:47,549 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 00:07:42] 2026-03-18 23:06:47,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 00:07:42] 2026-03-18 23:06:47,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 00:07:42] 2026-03-18 23:06:47,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 00:07:42] 2026-03-18 23:06:47,557 | INFO     | fitting pss+swap vs Time
[2026-03-19 00:07:42] 2026-03-18 23:06:47,558 | INFO     | sum of square deviations: 14709598590.5
[2026-03-19 00:07:42] 2026-03-18 23:06:47,573 | INFO     | sum of deviations: 149417678662.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,573 | INFO     | mean x: 1773864174.5
[2026-03-19 00:07:42] 2026-03-18 23:06:47,573 | INFO     | mean y: 2474882.8342541438
[2026-03-19 00:07:42] 2026-03-18 23:06:47,573 | INFO     | intersect: -18016145107.697083
[2026-03-19 00:07:42] 2026-03-18 23:06:47,574 | INFO     | chi2: 5.364440794626491
[2026-03-19 00:07:42] 2026-03-18 23:06:47,574 | INFO     | sum of square deviations: 14108461738.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,579 | INFO     | sum of deviations: 171058849717.99994
[2026-03-19 00:07:42] 2026-03-18 23:06:47,579 | INFO     | mean x: 1773864022.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,579 | INFO     | mean y: 2480304.1036414565
[2026-03-19 00:07:42] 2026-03-18 23:06:47,580 | INFO     | intersect: -21504835290.918808
[2026-03-19 00:07:42] 2026-03-18 23:06:47,580 | INFO     | chi2: 4.6119250040051485
[2026-03-19 00:07:42] 2026-03-18 23:06:47,580 | INFO     | current chi2=4.6119250040051485 (change=14.02785153999892 %)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,581 | INFO     | right removable region: 356
[2026-03-19 00:07:42] 2026-03-18 23:06:47,581 | INFO     | sum of square deviations: 14108461738.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,586 | INFO     | sum of deviations: 28315399130.999996
[2026-03-19 00:07:42] 2026-03-18 23:06:47,586 | INFO     | mean x: 1773864327.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,586 | INFO     | mean y: 2505573.467787115
[2026-03-19 00:07:42] 2026-03-18 23:06:47,586 | INFO     | intersect: -3557604476.5147357
[2026-03-19 00:07:42] 2026-03-18 23:06:47,587 | INFO     | chi2: 1.183983161416286
[2026-03-19 00:07:42] 2026-03-18 23:06:47,587 | INFO     | current chi2=1.183983161416286 (change=77.92904784032157 %)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,588 | INFO     | sum of square deviations: 13523929848.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,592 | INFO     | sum of deviations: 983421839.4999962
[2026-03-19 00:07:42] 2026-03-18 23:06:47,592 | INFO     | mean x: 1773864479.5
[2026-03-19 00:07:42] 2026-03-18 23:06:47,592 | INFO     | mean y: 2512656.497159091
[2026-03-19 00:07:42] 2026-03-18 23:06:47,592 | INFO     | intersect: -126477739.7160817
[2026-03-19 00:07:42] 2026-03-18 23:06:47,593 | INFO     | chi2: 0.8126598922204955
[2026-03-19 00:07:42] 2026-03-18 23:06:47,593 | INFO     | current chi2=0.8126598922204955 (change=31.36220862732641 %)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,594 | INFO     | sum of square deviations: 12955770358.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,598 | INFO     | sum of deviations: -794352126.0000038
[2026-03-19 00:07:42] 2026-03-18 23:06:47,598 | INFO     | mean x: 1773864632.0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,598 | INFO     | mean y: 2513124.273775216
[2026-03-19 00:07:42] 2026-03-18 23:06:47,598 | INFO     | intersect: 111273398.86411113
[2026-03-19 00:07:42] 2026-03-18 23:06:47,599 | INFO     | chi2: 0.8022053010884334
[2026-03-19 00:07:42] 2026-03-18 23:06:47,599 | INFO     | current chi2=0.8022053010884334 (change=1.2864657444206133 %)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,599 | INFO     | left removable region: 30
[2026-03-19 00:07:42] 2026-03-18 23:06:47,600 | INFO     | sum of square deviations: 10743038637.5
[2026-03-19 00:07:42] 2026-03-18 23:06:47,604 | INFO     | sum of deviations: 15216380185.500002
[2026-03-19 00:07:42] 2026-03-18 23:06:47,605 | INFO     | mean x: 1773864906.5
[2026-03-19 00:07:42] 2026-03-18 23:06:47,605 | INFO     | mean y: 2521272.6533742333
[2026-03-19 00:07:42] 2026-03-18 23:06:47,605 | INFO     | intersect: -2509971116.6788163
[2026-03-19 00:07:42] 2026-03-18 23:06:47,605 | INFO     | chi2: 0.0004137563475856435
[2026-03-19 00:07:42] 2026-03-18 23:06:47,606 | INFO     | current memory leak: 1.42 B/s (using 326 data points, chi2=0.00)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | ..............................
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | . Timing measurements:
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | . get job = 0 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | . initial setup = 99 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | . payload setup = 135 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | . stage-in = 0 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | . payload execution = 22151 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,610 | INFO     | . stage-out = 2 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,611 | INFO     | . log creation = 0 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,611 | INFO     | ..............................
[2026-03-19 00:07:42] 2026-03-18 23:06:47,736 | INFO     | 
[2026-03-19 00:07:42] 2026-03-18 23:06:47,737 | INFO     | job summary report
[2026-03-19 00:07:42] 2026-03-18 23:06:47,737 | INFO     | --------------------------------------------------
[2026-03-19 00:07:42] 2026-03-18 23:06:47,737 | INFO     | PanDA job id: 7057165818
[2026-03-19 00:07:42] 2026-03-18 23:06:47,737 | INFO     | task id: 49192141
[2026-03-19 00:07:42] 2026-03-18 23:06:47,737 | INFO     | errors: (none)
[2026-03-19 00:07:42] 2026-03-18 23:06:47,737 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 00:07:42] 2026-03-18 23:06:47,737 | INFO     | pilot state: finished 
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | transexitcode: 0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | exeerrorcode: 0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | exeerrordiag: 
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | exitcode: 0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | exitmsg: OK
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | cpuconsumptiontime: 85338 s
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | nevents: 400
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | neventsw: 0
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | pid: 18265
[2026-03-19 00:07:42] 2026-03-18 23:06:47,738 | INFO     | pgrp: 18265
[2026-03-19 00:07:42] 2026-03-18 23:06:47,739 | INFO     | corecount: 8
[2026-03-19 00:07:42] 2026-03-18 23:06:47,739 | INFO     | event service: False
[2026-03-19 00:07:42] 2026-03-18 23:06:47,739 | INFO     | sizes: {0: 2279832, 1: 2280233, 2: 2280293, 12: 2280321, 22292: 2314350, 22296: 2323350, 22298: 2323534, 22302: 2323728}
[2026-03-19 00:07:42] 2026-03-18 23:06:47,739 | INFO     | --------------------------------------------------
[2026-03-19 00:07:42] 2026-03-18 23:06:47,739 | INFO     | 
[2026-03-19 00:07:42] 2026-03-18 23:06:47,739 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-19 00:07:42] 2026-03-18 23:06:47,925 | INFO     | time since job start (22314s) is within the limit (345600.0s)
[2026-03-19 00:07:42] 2026-03-18 23:06:48,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,353 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,353 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,353 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,355 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 00:07:42] 2026-03-18 23:06:48,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,355 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 00:07:42] 2026-03-18 23:06:48,355 | INFO     | job 7057165818 has completed (purged errors)
[2026-03-19 00:07:42] 2026-03-18 23:06:48,355 | INFO     | overall cleanup function is called
[2026-03-19 00:07:42] 2026-03-18 23:06:49,365 | INFO     | --- collectZombieJob: --- 10, [18265]
[2026-03-19 00:07:42] 2026-03-18 23:06:49,365 | INFO     | zombie collector waiting for pid 18265
[2026-03-19 00:07:42] 2026-03-18 23:06:49,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 00:07:42] 2026-03-18 23:06:49,366 | INFO     | collected zombie processes
[2026-03-19 00:07:42] 2026-03-18 23:06:49,366 | INFO     | will attempt to kill all subprocesses of pid=18265
[2026-03-19 00:07:42] 2026-03-18 23:06:49,513 | INFO     | process IDs to be killed: [18265] (in reverse order)
[2026-03-19 00:07:42] 2026-03-18 23:06:50,542 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 00:07:42] 2026-03-18 23:06:50,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 00:07:42] 2026-03-18 23:06:50,545 | INFO     | did not find any defunct processes belonging to 18265
[2026-03-19 00:07:42] 2026-03-18 23:06:50,548 | INFO     | did not find any defunct processes belonging to 18265
[2026-03-19 00:07:42] 2026-03-18 23:06:50,548 | INFO     | ready for new job
[2026-03-19 00:07:42] 2026-03-18 23:06:50,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 00:07:42] 2026-03-18 23:06:50,551 | INFO     | **************************************
[2026-03-19 00:07:42] 2026-03-18 23:06:50,551 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 00:07:42] 2026-03-18 23:06:50,551 | INFO     | **************************************
[2026-03-19 00:07:42] 2026-03-18 23:06:50,551 | INFO     | 
[2026-03-19 00:07:42] 2026-03-18 23:06:50,552 | INFO     | pilot is running in a VM
[2026-03-19 00:07:42] 2026-03-18 23:06:50,552 | INFO     | architecture information:
[2026-03-19 00:07:42] 2026-03-18 23:06:50,552 | INFO     | executing command: cat /etc/os-release
[2026-03-19 00:07:42] 2026-03-18 23:06:50,771 | INFO     | cat /etc/os-release:
[2026-03-19 00:07:42] NAME="CentOS Linux"
[2026-03-19 00:07:42] VERSION="7 (Core)"
[2026-03-19 00:07:42] ID="centos"
[2026-03-19 00:07:42] ID_LIKE="rhel fedora"
[2026-03-19 00:07:42] VERSION_ID="7"
[2026-03-19 00:07:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 00:07:42] ANSI_COLOR="0;31"
[2026-03-19 00:07:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 00:07:42] HOME_URL="https://www.centos.org/"
[2026-03-19 00:07:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 00:07:42] 
[2026-03-19 00:07:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 00:07:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 00:07:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 00:07:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 00:07:42] 
[2026-03-19 00:07:42] 2026-03-18 23:06:50,771 | INFO     | **************************************
[2026-03-19 00:07:42] 2026-03-18 23:06:51,273 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-19 00:07:42] 2026-03-18 23:06:51,505 | INFO     | sufficient remaining disk space (495936602112 B)
[2026-03-19 00:07:42] 2026-03-18 23:06:51,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 00:07:42] 2026-03-18 23:06:51,505 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 00:07:42] 2026-03-18 23:06:51,505 | INFO     | update_server=False
[2026-03-19 00:07:42] 2026-03-18 23:06:51,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 00:07:42] 2026-03-18 23:06:51,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:07:42] 2026-03-18 23:06:51,581 | INFO     | aborting loop
[2026-03-19 00:07:42] 2026-03-18 23:06:51,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 00:07:42] 2026-03-18 23:06:52,402 | INFO     | all data control threads have been joined
[2026-03-19 00:07:42] 2026-03-18 23:06:52,441 | INFO     | all payload control threads have been joined
[2026-03-19 00:07:42] 2026-03-18 23:06:52,510 | INFO     | all job control threads have been joined
[2026-03-19 00:07:42] 2026-03-18 23:06:52,511 | INFO     | [job] retrieve thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:52,587 | INFO     | [job] job monitor thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:52,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 00:07:42] 2026-03-18 23:06:52,896 | INFO     | [job] validate thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,080 | INFO     | [payload] validate_post thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,269 | INFO     | [payload] failed_post thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,408 | INFO     | [data] control thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,447 | INFO     | [payload] control thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,496 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,500 | INFO     | [data] copytool_in thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,507 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,516 | INFO     | [job] control thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,675 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,756 | INFO     | [job] queue monitor thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,945 | INFO     | [data] copytool_out thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:53,954 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:06:54,487 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 00:07:42] 2026-03-18 23:06:58,498 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 00:07:42] 2026-03-18 23:07:21,094 | INFO     | PID=13786 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-19 00:07:42] 2026-03-18 23:07:21,094 | INFO     | .. there are 9 such processes running
[2026-03-19 00:07:42] 2026-03-18 23:07:21,095 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 00:07:42] 2026-03-18 23:07:21,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 00:07:42] 2026-03-18 23:07:21,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 00:07:42] 2026-03-18 23:07:31,416 | INFO     | [monitor] cgroup control has ended
[2026-03-19 00:07:42] 2026-03-18 23:07:32,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019283969856)>', '<ExcThread(monitor, started 140018987284224)>']
[2026-03-19 00:07:42] 2026-03-18 23:07:33,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 00:07:42] 2026-03-18 23:07:33,167 | INFO     | [monitor] control thread has ended
[2026-03-19 00:07:42] 2026-03-18 23:07:37,800 | INFO     | all workflow threads have been joined
[2026-03-19 00:07:42] 2026-03-18 23:07:37,801 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 00:07:42] 2026-03-18 23:07:37,801 | INFO     | traces error code: 0
[2026-03-19 00:07:42] 2026-03-18 23:07:37,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 00:07:42] 2026-03-18 23:07:38,199 [wrapper] ==== pilot stdout END ====
[2026-03-19 00:07:42] 2026-03-18 23:07:38,257 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 00:07:42] 2026-03-18 23:07:38,353 [wrapper] pilotpid: 13786
[2026-03-19 00:07:42] 2026-03-18 23:07:38,449 [wrapper] Pilot exit status: 0
[2026-03-19 00:07:42] 2026-03-18 23:07:39,079 [wrapper] pandaids: 7057165818
[2026-03-19 00:07:42] 2026-03-18 23:07:40,005 [wrapper] cleanup supervisor_pilot 11185 13787
[2026-03-19 00:07:42] 2026-03-18 23:07:40,029 [wrapper] Test setup, not cleaning
[2026-03-19 00:07:42] 2026-03-18 23:07:40,069 [wrapper] apfmon messages muted
[2026-03-19 00:07:42] 2026-03-18 23:07:40,108 [wrapper] ==== wrapper stdout END ====
[2026-03-19 00:07:42] 2026-03-18 23:07:40,148 [wrapper] ==== wrapper stderr END ====
[2026-03-19 00:07:42]  *** Error codes and diagnostics ***
[2026-03-19 00:07:42]     "exeErrorCode": 0,
[2026-03-19 00:07:42]     "exeErrorDiag": "",
[2026-03-19 00:07:42]     "pilotErrorCode": 0,
[2026-03-19 00:07:42]     "pilotErrorDiag": "",
[2026-03-19 00:07:42]  *** Listing of results directory ***
[2026-03-19 00:07:42] total 452760
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc      5111 Mar 17 13:21 queuedata.json
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc    585013 Mar 17 13:21 pilot3.tar.gz
[2026-03-19 00:07:42] -rwx------. 1 boinc boinc     36322 Mar 17 13:21 runpilot2-wrapper.sh
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc       100 Mar 18 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 00:07:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 17:49 run_atlas
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc       105 Mar 18 17:49 job.xml
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc      6392 Mar 18 17:49 init_data.xml
[2026-03-19 00:07:42] -rw-r--r--. 2 boinc boinc 248345012 Mar 18 17:49 EVNT.49130443._000001.pool.root.1
[2026-03-19 00:07:42] -rw-r--r--. 2 boinc boinc     15845 Mar 18 17:49 start_atlas.sh
[2026-03-19 00:07:42] drwxrwx--x. 2 boinc boinc        68 Mar 18 17:49 shared
[2026-03-19 00:07:42] -rw-r--r--. 2 boinc boinc    597526 Mar 18 17:49 input.tar.gz
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc         0 Mar 18 17:49 boinc_lockfile
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc      2586 Mar 18 17:49 pandaJob.out
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc       415 Mar 18 17:54 workernode_map.json
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc   1011280 Mar 18 17:54 agis_schedconf.cvmfs.json
[2026-03-19 00:07:42] drwx------. 5 boinc boinc      4096 Mar 18 17:54 pilot3
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc 203975701 Mar 19 00:05 HITS.49192141._000013.pool.root.1
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc       531 Mar 19 00:05 boinc_task_state.xml
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc      1024 Mar 19 00:06 memory_monitor_summary.json
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc   1511579 Mar 19 00:06 agis_ddmendpoints.agis.ALL.json
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc    574551 Mar 19 00:06 log.49192141._000013.job.log.tgz.1
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc      6302 Mar 19 00:06 heartbeat.json
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc      8192 Mar 19 00:07 boinc_mmap_file
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc        28 Mar 19 00:07 wrapper_checkpoint.txt
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc        95 Mar 19 00:07 pilot_heartbeat.json
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc      4881 Mar 19 00:07 pilotlog.txt
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc   3113261 Mar 19 00:07 log.49192141._000013.job.log.1
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc       357 Mar 19 00:07 output.list
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc       620 Mar 19 00:07 runtime_log
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc   3706880 Mar 19 00:07 result.tar.gz
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc      8832 Mar 19 00:07 runtime_log.err
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc       656 Mar 19 00:07 lvUMDmqbiM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfCxLDmRuOGdn.diag
[2026-03-19 00:07:42] -rw-r--r--. 1 boinc boinc     20752 Mar 19 00:07 stderr.txt
[2026-03-19 00:07:42] HITS file was successfully produced:
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc 203975701 Mar 19 00:05 shared/HITS.pool.root.1
[2026-03-19 00:07:42]  *** Contents of shared directory: ***
[2026-03-19 00:07:42] total 445944
[2026-03-19 00:07:42] -rw-r--r--. 2 boinc boinc 248345012 Mar 18 17:49 ATLAS.root_0
[2026-03-19 00:07:42] -rw-r--r--. 2 boinc boinc     15845 Mar 18 17:49 start_atlas.sh
[2026-03-19 00:07:42] -rw-r--r--. 2 boinc boinc    597526 Mar 18 17:49 input.tar.gz
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc 203975701 Mar 19 00:05 HITS.pool.root.1
[2026-03-19 00:07:42] -rw-------. 1 boinc boinc   3706880 Mar 19 00:07 result.tar.gz
00:07:44 (9685): run_atlas exited; CPU time 85691.941254
00:07:44 (9685): called boinc_finish(0)

</stderr_txt>
]]>

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