Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:48:08 (2670061): wrapper (7.7.26015): starting
05:48:08 (2670061): wrapper: running run_atlas (--nthreads 2)
[2026-03-18 05:48:08] Arguments: --nthreads 2
[2026-03-18 05:48:08] Threads: 2
[2026-03-18 05:48:08] Checking for CVMFS
[2026-03-18 05:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 05:48:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 05:48:09] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 05:48:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 05:48:09] 2.9.2.0 2550726 2151 55396 157403 0 50 28612953 36864001 0 130560 0 343392 99.959 75698 9112 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-18 05:48:09] CVMFS is ok
[2026-03-18 05:48:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 05:48:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 05:48:09] Further information can be found at the LHC@home message board.
[2026-03-18 05:48:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 05:48:09] Checking for apptainer binary...
[2026-03-18 05:48:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 05:48:09] Running /usr/bin/apptainer --version
[2026-03-18 05:48:09] apptainer version 1.4.1-1.1
[2026-03-18 05:48:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 05:48:09] thA314b
[2026-03-18 05:48:09] apptainer works
[2026-03-18 05:48:09] Set ATHENA_PROC_NUMBER=2
[2026-03-18 05:48:09] Set ATHENA_CORE_NUMBER=2
[2026-03-18 05:48:09] Starting ATLAS job with PandaID=7041002824
[2026-03-18 05:48:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 07:44:50]  *** The last 200 lines of the pilot log: ***
[2026-03-18 07:44:50] 2026-03-18 06:43:47,169 | INFO     | aborting loop
[2026-03-18 07:44:50] 2026-03-18 06:43:47,232 | INFO     | all data control threads have been joined
[2026-03-18 07:44:50] 2026-03-18 06:43:48,136 | INFO     | all payload control threads have been joined
[2026-03-18 07:44:50] 2026-03-18 06:43:48,173 | INFO     | [job] retrieve thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:48,174 | INFO     | [job] job monitor thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:48,175 | INFO     | [job] queue monitor thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:48,236 | INFO     | [data] control thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:48,248 | INFO     | [payload] failed_post thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:48,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 07:44:50] 2026-03-18 06:43:48,511 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:48,671 | INFO     | all job control threads have been joined
[2026-03-18 07:44:50] 2026-03-18 06:43:49,040 | INFO     | [payload] validate_post thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:49,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 07:44:50] 2026-03-18 06:43:49,142 | INFO     | [payload] control thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:49,242 | INFO     | [job] validate thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:49,318 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:49,421 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:49,543 | INFO     | [data] copytool_in thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:49,677 | INFO     | [job] control thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:50,331 | INFO     | [data] copytool_out thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:53,105 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:43:57,593 | INFO     | job.realtimelogging is not enabled
[2026-03-18 07:44:50] 2026-03-18 06:43:58,598 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 07:44:50] 2026-03-18 06:44:17,878 | INFO     | PID=2674091 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 07:44:50] 2026-03-18 06:44:17,878 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 07:44:50] 2026-03-18 06:44:17,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 07:44:50] 2026-03-18 06:44:17,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 07:44:50] 2026-03-18 06:44:43,515 | INFO     | [monitor] cgroup control has ended
[2026-03-18 07:44:50] 2026-03-18 06:44:45,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914706437952)>', '<ExcThread(monitor, started 139913961912064)>']
[2026-03-18 07:44:50] 2026-03-18 06:44:46,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 07:44:50] 2026-03-18 06:44:46,023 | INFO     | [monitor] control thread has ended
[2026-03-18 07:44:50] 2026-03-18 06:44:50,571 | INFO     | all workflow threads have been joined
[2026-03-18 07:44:50] 2026-03-18 06:44:50,572 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 07:44:50] 2026-03-18 06:44:50,572 | INFO     | traces error code: 0
[2026-03-18 07:44:50] 2026-03-18 06:44:50,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 07:44:50] 2026-03-18 06:44:50,615 [wrapper] ==== pilot stdout END ====
[2026-03-18 07:44:50] 2026-03-18 06:44:50,617 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 07:44:50] 2026-03-18 06:44:50,620 [wrapper] pilotpid: 2674091
[2026-03-18 07:44:50] 2026-03-18 06:44:50,622 [wrapper] Pilot exit status: 0
[2026-03-18 07:44:50] 2026-03-18 06:44:50,629 [wrapper] pandaids: 7041002824
[2026-03-18 07:44:50] 2026-03-18 06:44:50,642 [wrapper] cleanup supervisor_pilot 2684288 2674092
[2026-03-18 07:44:50] 2026-03-18 06:44:50,644 [wrapper] Test setup, not cleaning
[2026-03-18 07:44:50] 2026-03-18 06:44:50,647 [wrapper] apfmon messages muted
[2026-03-18 07:44:50] 2026-03-18 06:44:50,649 [wrapper] ==== wrapper stdout END ====
[2026-03-18 07:44:50] 2026-03-18 06:44:50,651 [wrapper] ==== wrapper stderr END ====
[2026-03-18 07:44:50]  *** Error codes and diagnostics ***
[2026-03-18 07:44:50]     "exeErrorCode": 0,
[2026-03-18 07:44:50]     "exeErrorDiag": "",
[2026-03-18 07:44:50]     "pilotErrorCode": 0,
[2026-03-18 07:44:50]     "pilotErrorDiag": "",
[2026-03-18 07:44:50]  *** Listing of results directory ***
[2026-03-18 07:44:50] total 616076
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc    584627 Mar  9 18:06 pilot3.tar.gz
[2026-03-18 07:44:50] -rwx------ 1 boinc boinc     36322 Mar  9 18:45 runpilot2-wrapper.sh
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc      5111 Mar  9 18:46 queuedata.json
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc       100 Mar 18 05:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 07:44:50] -rwxr-xr-x 1 boinc boinc      7986 Mar 18 05:48 run_atlas
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc       105 Mar 18 05:48 job.xml
[2026-03-18 07:44:50] -rw-r--r-- 2 boinc boinc 439892631 Mar 18 05:48 EVNT.46701403._001395.pool.root.1
[2026-03-18 07:44:50] -rw-r--r-- 2 boinc boinc    597960 Mar 18 05:48 input.tar.gz
[2026-03-18 07:44:50] -rw-r--r-- 2 boinc boinc     15845 Mar 18 05:48 start_atlas.sh
[2026-03-18 07:44:50] drwxrwx--x 2 boinc boinc      4096 Mar 18 05:48 shared
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc         0 Mar 18 05:48 boinc_setup_complete
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc      6206 Mar 18 05:48 init_data.xml
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc         0 Mar 18 05:48 boinc_lockfile
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc      2563 Mar 18 05:48 pandaJob.out
[2026-03-18 07:44:50] -rw------- 1 boinc boinc   1011499 Mar 18 05:48 agis_schedconf.cvmfs.json
[2026-03-18 07:44:50] -rw------- 1 boinc boinc   1511579 Mar 18 05:48 agis_ddmendpoints.agis.ALL.json
[2026-03-18 07:44:50] -rw------- 1 boinc boinc       418 Mar 18 05:48 workernode_map.json
[2026-03-18 07:44:50] drwx------ 5 boinc boinc      4096 Mar 18 05:48 pilot3
[2026-03-18 07:44:50] -rw------- 1 boinc boinc 184442125 Mar 18 07:43 HITS.48955010._019803.pool.root.1
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc       530 Mar 18 07:43 boinc_task_state.xml
[2026-03-18 07:44:50] -rw------- 1 boinc boinc      1012 Mar 18 07:43 memory_monitor_summary.json
[2026-03-18 07:44:50] -rw------- 1 boinc boinc    303314 Mar 18 07:43 log.48955010._019803.job.log.tgz.1
[2026-03-18 07:44:50] -rw------- 1 boinc boinc      6296 Mar 18 07:43 heartbeat.json
[2026-03-18 07:44:50] -rw------- 1 boinc boinc        95 Mar 18 07:44 pilot_heartbeat.json
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc        27 Mar 18 07:44 wrapper_checkpoint.txt
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc      8192 Mar 18 07:44 boinc_mmap_file
[2026-03-18 07:44:50] -rw------- 1 boinc boinc      4820 Mar 18 07:44 pilotlog.txt
[2026-03-18 07:44:50] -rw------- 1 boinc boinc    994829 Mar 18 07:44 log.48955010._019803.job.log.1
[2026-03-18 07:44:50] -rw------- 1 boinc boinc       357 Mar 18 07:44 output.list
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc       620 Mar 18 07:44 runtime_log
[2026-03-18 07:44:50] -rw------- 1 boinc boinc   1320960 Mar 18 07:44 result.tar.gz
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc      8901 Mar 18 07:44 runtime_log.err
[2026-03-18 07:44:50] -rw------- 1 boinc boinc       658 Mar 18 07:44 e8mLDmCrtJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWGdLDmHSpy9n.diag
[2026-03-18 07:44:50] -rw-r--r-- 1 boinc boinc      7032 Mar 18 07:44 stderr.txt
[2026-03-18 07:44:50] HITS file was successfully produced:
[2026-03-18 07:44:50] -rw------- 1 boinc boinc 184442125 Mar 18 07:43 shared/HITS.pool.root.1
[2026-03-18 07:44:50]  *** Contents of shared directory: ***
[2026-03-18 07:44:50] total 611604
[2026-03-18 07:44:50] -rw-r--r-- 2 boinc boinc 439892631 Mar 18 05:48 ATLAS.root_0
[2026-03-18 07:44:50] -rw-r--r-- 2 boinc boinc    597960 Mar 18 05:48 input.tar.gz
[2026-03-18 07:44:50] -rw-r--r-- 2 boinc boinc     15845 Mar 18 05:48 start_atlas.sh
[2026-03-18 07:44:50] -rw------- 1 boinc boinc 184442125 Mar 18 07:43 HITS.pool.root.1
[2026-03-18 07:44:50] -rw------- 1 boinc boinc   1320960 Mar 18 07:44 result.tar.gz
07:44:51 (2670061): run_atlas exited; CPU time 13233.646690
07:44:51 (2670061): called boinc_finish(0)

</stderr_txt>
]]>

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