Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:28 (751369): wrapper (7.7.26015): starting
07:04:28 (751369): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 07:04:28] Arguments: --nthreads 8
[2026-03-17 07:04:28] Threads: 8
[2026-03-17 07:04:28] Checking for CVMFS
[2026-03-17 07:04:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 07:04:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 07:04:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 07:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 07:04:30] 2.13.3.0 9597 119054 166328 157368 0 750 35775723 40960000 30163 16776704 0 844256781 99.690 668742796 43769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 07:04:30] CVMFS is ok
[2026-03-17 07:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 07:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 07:04:30] Further information can be found at the LHC@home message board.
[2026-03-17 07:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 07:04:30] Checking for apptainer binary...
[2026-03-17 07:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 07:04:30] Running /usr/bin/apptainer --version
[2026-03-17 07:04:30] apptainer version 1.4.5-2.el9
[2026-03-17 07:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 07:04:31] c-208-38.aglt2.org
[2026-03-17 07:04:31] apptainer works
[2026-03-17 07:04:31] Set ATHENA_PROC_NUMBER=8
[2026-03-17 07:04:31] Set ATHENA_CORE_NUMBER=8
[2026-03-17 07:04:31] Starting ATLAS job with PandaID=7056888400
[2026-03-17 07:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 12:04:50]  *** The last 200 lines of the pilot log: ***
[2026-03-17 12:04:51] 2026-03-17 16:03:46,245 | INFO     | preparing for final server update for job 7056888400 in state='finished'
[2026-03-17 12:04:51] 2026-03-17 16:03:46,247 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7056888400/jobReport.json
[2026-03-17 12:04:51] 2026-03-17 16:03:46,248 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-03-17 12:04:51] 2026-03-17 16:03:46,277 | INFO     | this job has now completed (state=finished)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,277 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,277 | INFO     | log transfer has been attempted: DONE
[2026-03-17 12:04:51] 2026-03-17 16:03:46,277 | INFO     | job 7056888400 has finished - writing final server update
[2026-03-17 12:04:51] 2026-03-17 16:03:46,277 | INFO     | total number of processed events: 400 (read)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,334 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7056888400/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,335 | INFO     | extracted standard info from prmon json
[2026-03-17 12:04:51] 2026-03-17 16:03:46,335 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 12:04:51] 2026-03-17 16:03:46,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 12:04:51] 2026-03-17 16:03:46,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 12:04:51] 2026-03-17 16:03:46,335 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 12:04:51] 2026-03-17 16:03:46,337 | INFO     | fitting pss+swap vs Time
[2026-03-17 12:04:51] 2026-03-17 16:03:46,381 | INFO     | sum of square deviations: 7720019603.763722
[2026-03-17 12:04:51] 2026-03-17 16:03:46,382 | INFO     | sum of deviations: 93984712811.07202
[2026-03-17 12:04:51] 2026-03-17 16:03:46,382 | INFO     | mean x: 1773754520.5650685
[2026-03-17 12:04:51] 2026-03-17 16:03:46,382 | INFO     | mean y: 2472039.654109589
[2026-03-17 12:04:51] 2026-03-17 16:03:46,382 | INFO     | intersect: -21591489863.159588
[2026-03-17 12:04:51] 2026-03-17 16:03:46,382 | INFO     | chi2: 3.979857960902067
[2026-03-17 12:04:51] 2026-03-17 16:03:46,383 | INFO     | sum of square deviations: 7330194833.742159
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | sum of deviations: 110151974854.1081
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | mean x: 1773754368.0662022
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | mean y: 2478264.31010453
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | intersect: -26652003776.08709
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | chi2: 3.309994356332593
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | current chi2=3.309994356332593 (change=16.83134451405507 %)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | right removable region: 286
[2026-03-17 12:04:51] 2026-03-17 16:03:46,384 | INFO     | sum of square deviations: 7330183243.742159
[2026-03-17 12:04:51] 2026-03-17 16:03:46,440 | INFO     | sum of deviations: 11110951032.160305
[2026-03-17 12:04:51] 2026-03-17 16:03:46,441 | INFO     | mean x: 1773754673.0662022
[2026-03-17 12:04:51] 2026-03-17 16:03:46,441 | INFO     | mean y: 2504370.202090592
[2026-03-17 12:04:51] 2026-03-17 16:03:46,441 | INFO     | intersect: -2686118909.758756
[2026-03-17 12:04:51] 2026-03-17 16:03:46,441 | INFO     | chi2: 0.7859898870704523
[2026-03-17 12:04:51] 2026-03-17 16:03:46,441 | INFO     | current chi2=0.7859898870704523 (change=80.250805561606 %)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,441 | INFO     | sum of square deviations: 6953695971.219897
[2026-03-17 12:04:51] 2026-03-17 16:03:46,442 | INFO     | sum of deviations: -1129467007.8085117
[2026-03-17 12:04:51] 2026-03-17 16:03:46,442 | INFO     | mean x: 1773754825.567376
[2026-03-17 12:04:51] 2026-03-17 16:03:46,442 | INFO     | mean y: 2509317.0425531915
[2026-03-17 12:04:51] 2026-03-17 16:03:46,442 | INFO     | intersect: 290614745.25097597
[2026-03-17 12:04:51] 2026-03-17 16:03:46,443 | INFO     | chi2: 0.7224943920726193
[2026-03-17 12:04:51] 2026-03-17 16:03:46,443 | INFO     | current chi2=0.7224943920726193 (change=8.078411191077004 %)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,443 | INFO     | left removable region: 20
[2026-03-17 12:04:51] 2026-03-17 16:03:46,443 | INFO     | sum of square deviations: 5835964483.281988
[2026-03-17 12:04:51] 2026-03-17 16:03:46,458 | INFO     | sum of deviations: 11723570302.015026
[2026-03-17 12:04:51] 2026-03-17 16:03:46,458 | INFO     | mean x: 1773754947.5676692
[2026-03-17 12:04:51] 2026-03-17 16:03:46,458 | INFO     | mean y: 2518208.4436090225
[2026-03-17 12:04:51] 2026-03-17 16:03:46,458 | INFO     | intersect: -3560687305.5594754
[2026-03-17 12:04:51] 2026-03-17 16:03:46,458 | INFO     | chi2: 0.0020822104225817813
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | current memory leak: 2.01 B/s (using 266 data points, chi2=0.00)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | could have reported an average CPU frequency of 3799 MHz (13 samples)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | ..............................
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . Timing measurements:
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . get job = 0 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . initial setup = 38 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . payload setup = 43 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . stage-in = 0 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . payload execution = 17795 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . stage-out = 3 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | . log creation = 0 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,459 | INFO     | ..............................
[2026-03-17 12:04:51] 2026-03-17 16:03:46,802 | INFO     | 
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | job summary report
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | --------------------------------------------------
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | PanDA job id: 7056888400
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | task id: 49176159
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | errors: (none)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | pilot state: finished 
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | transexitcode: 0
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | exeerrorcode: 0
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | exeerrordiag: 
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | exitcode: 0
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | exitmsg: OK
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | cpuconsumptiontime: 71047 s
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | nevents: 400
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | neventsw: 0
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | pid: 773177
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | pgrp: 773177
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | corecount: 8
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | event service: False
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | sizes: {0: 2279867, 1: 2280328, 17843: 2312664, 17844: 2312663, 17848: 2321717, 17849: 2321773, 17851: 2322095}
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | --------------------------------------------------
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | 
[2026-03-17 12:04:51] 2026-03-17 16:03:46,803 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-17 12:04:51] 2026-03-17 16:03:46,877 | INFO     | time since job start (17853s) is within the limit (345600.0s)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,908 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 12:04:51] 2026-03-17 16:03:46,909 | INFO     | job 7056888400 has completed (purged errors)
[2026-03-17 12:04:51] 2026-03-17 16:03:46,909 | INFO     | overall cleanup function is called
[2026-03-17 12:04:51] 2026-03-17 16:03:47,922 | INFO     | --- collectZombieJob: --- 10, [773177]
[2026-03-17 12:04:51] 2026-03-17 16:03:47,922 | INFO     | zombie collector waiting for pid 773177
[2026-03-17 12:04:51] 2026-03-17 16:03:47,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 12:04:51] 2026-03-17 16:03:47,924 | INFO     | collected zombie processes
[2026-03-17 12:04:51] 2026-03-17 16:03:47,924 | INFO     | will attempt to kill all subprocesses of pid=773177
[2026-03-17 12:04:51] 2026-03-17 16:03:49,789 | INFO     | process IDs to be killed: [773177] (in reverse order)
[2026-03-17 12:04:51] 2026-03-17 16:03:50,074 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 12:04:51] 2026-03-17 16:03:50,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 12:04:51] 2026-03-17 16:03:50,110 | INFO     | did not find any defunct processes belonging to 773177
[2026-03-17 12:04:51] 2026-03-17 16:03:50,146 | INFO     | did not find any defunct processes belonging to 773177
[2026-03-17 12:04:51] 2026-03-17 16:03:50,146 | INFO     | ready for new job
[2026-03-17 12:04:51] 2026-03-17 16:03:50,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 12:04:51] 2026-03-17 16:03:50,148 | INFO     | **************************************
[2026-03-17 12:04:51] 2026-03-17 16:03:50,148 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 12:04:51] 2026-03-17 16:03:50,148 | INFO     | **************************************
[2026-03-17 12:04:51] 2026-03-17 16:03:50,148 | INFO     | 
[2026-03-17 12:04:51] 2026-03-17 16:03:50,165 | INFO     | architecture information:
[2026-03-17 12:04:51] 2026-03-17 16:03:50,190 | INFO     | executing command: cat /etc/os-release
[2026-03-17 12:04:51] 2026-03-17 16:03:50,221 | INFO     | cat /etc/os-release:
[2026-03-17 12:04:51] NAME="CentOS Linux"
[2026-03-17 12:04:51] VERSION="7 (Core)"
[2026-03-17 12:04:51] ID="centos"
[2026-03-17 12:04:51] ID_LIKE="rhel fedora"
[2026-03-17 12:04:51] VERSION_ID="7"
[2026-03-17 12:04:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 12:04:51] ANSI_COLOR="0;31"
[2026-03-17 12:04:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 12:04:51] HOME_URL="https://www.centos.org/"
[2026-03-17 12:04:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 12:04:51] 
[2026-03-17 12:04:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 12:04:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 12:04:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 12:04:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 12:04:51] 
[2026-03-17 12:04:51] 2026-03-17 16:03:50,221 | INFO     | **************************************
[2026-03-17 12:04:51] 2026-03-17 16:03:50,725 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-17 12:04:51] 2026-03-17 16:03:50,793 | INFO     | sufficient remaining disk space (169539010560 B)
[2026-03-17 12:04:51] 2026-03-17 16:03:50,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 12:04:51] 2026-03-17 16:03:50,793 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 12:04:51] 2026-03-17 16:03:50,793 | INFO     | update_server=False
[2026-03-17 12:04:51] 2026-03-17 16:03:50,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 12:04:51] 2026-03-17 16:03:50,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 12:04:51] 2026-03-17 16:03:51,148 | INFO     | all payload control threads have been joined
[2026-03-17 12:04:51] 2026-03-17 16:03:51,186 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 12:04:51] 2026-03-17 16:03:51,186 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 12:04:51] 2026-03-17 16:03:51,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 12:04:51] 2026-03-17 16:03:51,186 | INFO     | will abort loop
[2026-03-17 12:04:51] 2026-03-17 16:03:51,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 12:04:51] 2026-03-17 16:03:51,758 | INFO     | all job control threads have been joined
[2026-03-17 12:04:51] 2026-03-17 16:03:51,799 | INFO     | [job] retrieve thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:51,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 12:04:51] 2026-03-17 16:03:51,839 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:51,894 | INFO     | all data control threads have been joined
[2026-03-17 12:04:51] 2026-03-17 16:03:51,942 | INFO     | [payload] validate_post thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,154 | INFO     | [payload] control thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,191 | INFO     | [job] job monitor thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,296 | INFO     | [data] copytool_in thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,764 | INFO     | [job] control thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,766 | INFO     | [job] validate thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,796 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,829 | INFO     | [job] queue monitor thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:52,899 | INFO     | [data] control thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:53,021 | INFO     | [payload] failed_post thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:53,046 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:53,065 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:53,351 | INFO     | [data] copytool_out thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:03:54,850 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 12:04:51] 2026-03-17 16:04:21,254 | INFO     | PID=761199 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-17 12:04:51] 2026-03-17 16:04:21,254 | INFO     | .. there are 36 such processes running
[2026-03-17 12:04:51] 2026-03-17 16:04:21,255 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 12:04:51] 2026-03-17 16:04:21,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 12:04:51] 2026-03-17 16:04:21,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 12:04:51] 2026-03-17 16:04:42,966 | INFO     | [monitor] cgroup control has ended
[2026-03-17 12:04:51] 2026-03-17 16:04:43,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140434888640320)>', '<ExcThread(monitor, started 140434324043520)>']
[2026-03-17 12:04:51] 2026-03-17 16:04:43,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 12:04:51] 2026-03-17 16:04:43,405 | INFO     | [monitor] control thread has ended
[2026-03-17 12:04:51] 2026-03-17 16:04:48,225 | INFO     | all workflow threads have been joined
[2026-03-17 12:04:51] 2026-03-17 16:04:48,227 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 12:04:51] 2026-03-17 16:04:48,227 | INFO     | traces error code: 0
[2026-03-17 12:04:51] 2026-03-17 16:04:48,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 12:04:51] 2026-03-17 16:04:49,952 [wrapper] ==== pilot stdout END ====
[2026-03-17 12:04:51] 2026-03-17 16:04:49,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 12:04:51] 2026-03-17 16:04:50,018 [wrapper] pilotpid: 761199
[2026-03-17 12:04:51] 2026-03-17 16:04:50,037 [wrapper] Pilot exit status: 0
[2026-03-17 12:04:51] 2026-03-17 16:04:50,158 [wrapper] pandaids: 7056888400
[2026-03-17 12:04:51] 2026-03-17 16:04:50,390 [wrapper] cleanup supervisor_pilot 2246208 761200
[2026-03-17 12:04:51] 2026-03-17 16:04:50,392 [wrapper] Test setup, not cleaning
[2026-03-17 12:04:51] 2026-03-17 16:04:50,394 [wrapper] apfmon messages muted
[2026-03-17 12:04:51] 2026-03-17 16:04:50,397 [wrapper] ==== wrapper stdout END ====
[2026-03-17 12:04:51] 2026-03-17 16:04:50,399 [wrapper] ==== wrapper stderr END ====
[2026-03-17 12:04:51]  *** Error codes and diagnostics ***
[2026-03-17 12:04:51]     "exeErrorCode": 0,
[2026-03-17 12:04:51]     "exeErrorDiag": "",
[2026-03-17 12:04:51]     "pilotErrorCode": 0,
[2026-03-17 12:04:51]     "pilotErrorDiag": "",
[2026-03-17 12:04:51]  *** Listing of results directory ***
[2026-03-17 12:04:51] total 482540
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 08:24 pilot3.tar.gz
[2026-03-17 12:04:51] -rwx------. 1 boincer umatlas     36322 Mar 16 08:55 runpilot2-wrapper.sh
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 08:58 queuedata.json
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas       100 Mar 17 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 12:04:51] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 17 07:04 run_atlas
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas       105 Mar 17 07:04 job.xml
[2026-03-17 12:04:51] -rw-r--r--. 2 boincer umatlas 240395609 Mar 17 07:04 EVNT.49132792._000003.pool.root.1
[2026-03-17 12:04:51] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 07:04 start_atlas.sh
[2026-03-17 12:04:51] drwxrwx--x. 2 boincer umatlas      4096 Mar 17 07:04 shared
[2026-03-17 12:04:51] -rw-r--r--. 2 boincer umatlas    597540 Mar 17 07:04 input.tar.gz
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas         0 Mar 17 07:04 boinc_lockfile
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas      2613 Mar 17 07:04 pandaJob.out
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas        57 Mar 17 07:04 setup.sh.local
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas   1006426 Mar 17 07:05 agis_schedconf.cvmfs.json
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas       432 Mar 17 07:06 workernode_map.json
[2026-03-17 12:04:51] drwx------. 5 boincer umatlas      4096 Mar 17 07:06 pilot3
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas 244170816 Mar 17 12:02 HITS.49176159._000070.pool.root.1
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas       530 Mar 17 12:02 boinc_task_state.xml
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas      7186 Mar 17 12:03 init_data.xml
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas      1053 Mar 17 12:03 memory_monitor_summary.json
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas   1511579 Mar 17 12:03 agis_ddmendpoints.agis.ALL.json
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas    516383 Mar 17 12:03 log.49176159._000070.job.log.tgz.1
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas      6360 Mar 17 12:03 heartbeat.json
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas        95 Mar 17 12:04 pilot_heartbeat.json
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas      5006 Mar 17 12:04 pilotlog.txt
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas      8192 Mar 17 12:04 boinc_mmap_file
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas        28 Mar 17 12:04 wrapper_checkpoint.txt
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas   2287843 Mar 17 12:04 log.49176159._000070.job.log.1
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas       357 Mar 17 12:04 output.list
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas       620 Mar 17 12:04 runtime_log
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas   2826240 Mar 17 12:04 result.tar.gz
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas      9342 Mar 17 12:04 runtime_log.err
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas       662 Mar 17 12:04 kR4KDmneMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZBwLDmKhRhPn.diag
[2026-03-17 12:04:51] -rw-r--r--. 1 boincer umatlas     21340 Mar 17 12:04 stderr.txt
[2026-03-17 12:04:51] HITS file was successfully produced:
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas 244170816 Mar 17 12:02 shared/HITS.pool.root.1
[2026-03-17 12:04:51]  *** Contents of shared directory: ***
[2026-03-17 12:04:51] total 476580
[2026-03-17 12:04:51] -rw-r--r--. 2 boincer umatlas 240395609 Mar 17 07:04 ATLAS.root_0
[2026-03-17 12:04:51] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 07:04 start_atlas.sh
[2026-03-17 12:04:51] -rw-r--r--. 2 boincer umatlas    597540 Mar 17 07:04 input.tar.gz
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas 244170816 Mar 17 12:02 HITS.pool.root.1
[2026-03-17 12:04:51] -rw-------. 1 boincer umatlas   2826240 Mar 17 12:04 result.tar.gz
12:04:53 (751369): run_atlas exited; CPU time 71640.660566
12:04:53 (751369): called boinc_finish(0)

</stderr_txt>
]]>

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