Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:45:33 (1346907): wrapper (7.7.26015): starting
09:45:33 (1346907): wrapper: running run_atlas (--nthreads 11)
[2026-03-17 09:45:33] Arguments: --nthreads 11
[2026-03-17 09:45:33] Threads: 11
[2026-03-17 09:45:33] Checking for CVMFS
[2026-03-17 09:45:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 09:45:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 09:45:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 09:45:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 09:45:36] 2.13.3.0 14328 189945 339928 157373 1 647 23949647 40960000 69394 16776704 0 1915935804 99.729 1370573636 47853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-17 09:45:36] CVMFS is ok
[2026-03-17 09:45:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 09:45:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 09:45:36] Further information can be found at the LHC@home message board.
[2026-03-17 09:45:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 09:45:36] Checking for apptainer binary...
[2026-03-17 09:45:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 09:45:36] Running /usr/bin/apptainer --version
[2026-03-17 09:45:36] apptainer version 1.4.5-2.el9
[2026-03-17 09:45:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 09:45:37] c8-16-2.aglt2.org
[2026-03-17 09:45:37] apptainer works
[2026-03-17 09:45:37] Set ATHENA_PROC_NUMBER=11
[2026-03-17 09:45:37] Set ATHENA_CORE_NUMBER=11
[2026-03-17 09:45:37] Starting ATLAS job with PandaID=7057100557
[2026-03-17 09:45:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 13:08:08]  *** The last 200 lines of the pilot log: ***
[2026-03-17 13:08:08] 2026-03-17 17:07:28,226 | INFO     | fitting pss+swap vs Time
[2026-03-17 13:08:08] 2026-03-17 17:07:28,226 | INFO     | sum of square deviations: 2299161504.1333256
[2026-03-17 13:08:08] 2026-03-17 17:07:28,227 | INFO     | sum of deviations: 59875087639.33334
[2026-03-17 13:08:08] 2026-03-17 17:07:28,227 | INFO     | mean x: 1773761264.0666666
[2026-03-17 13:08:08] 2026-03-17 17:07:28,227 | INFO     | mean y: 2620745.8205128205
[2026-03-17 13:08:08] 2026-03-17 17:07:28,227 | INFO     | intersect: -46189919859.22944
[2026-03-17 13:08:08] 2026-03-17 17:07:28,227 | INFO     | chi2: 2.8301477209159436
[2026-03-17 13:08:08] 2026-03-17 17:07:28,227 | INFO     | sum of square deviations: 2126799446.6105206
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | sum of deviations: 57981356222.947334
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | mean x: 1773761111.5684211
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | mean y: 2619072.1578947366
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | intersect: -48354114811.78391
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | chi2: 2.8331548392638397
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | current chi2=2.8331548392638397 (change=-0.10625305264712168 %)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | right removable region: 189
[2026-03-17 13:08:08] 2026-03-17 17:07:28,228 | INFO     | sum of square deviations: 2126791516.6105206
[2026-03-17 13:08:08] 2026-03-17 17:07:28,229 | INFO     | sum of deviations: 7067609291.336842
[2026-03-17 13:08:08] 2026-03-17 17:07:28,229 | INFO     | mean x: 1773761416.5684211
[2026-03-17 13:08:08] 2026-03-17 17:07:28,229 | INFO     | mean y: 2667213.0894736843
[2026-03-17 13:08:08] 2026-03-17 17:07:28,229 | INFO     | intersect: -5891776398.54053
[2026-03-17 13:08:08] 2026-03-17 17:07:28,229 | INFO     | chi2: 0.04147770555341342
[2026-03-17 13:08:08] 2026-03-17 17:07:28,229 | INFO     | current chi2=0.04147770555341342 (change=98.53443319418007 %)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,229 | INFO     | sum of square deviations: 1963258904.0864816
[2026-03-17 13:08:08] 2026-03-17 17:07:28,230 | INFO     | sum of deviations: 2370464812.6810813
[2026-03-17 13:08:08] 2026-03-17 17:07:28,230 | INFO     | mean x: 1773761569.0702703
[2026-03-17 13:08:08] 2026-03-17 17:07:28,230 | INFO     | mean y: 2671558.1783783785
[2026-03-17 13:08:08] 2026-03-17 17:07:28,230 | INFO     | intersect: -2138991661.4892836
[2026-03-17 13:08:08] 2026-03-17 17:07:28,230 | INFO     | chi2: 0.00937297812149344
[2026-03-17 13:08:08] 2026-03-17 17:07:28,230 | INFO     | current chi2=0.00937297812149344 (change=77.40237075210617 %)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,231 | INFO     | sum of square deviations: 1808331104.0611084
[2026-03-17 13:08:08] 2026-03-17 17:07:28,231 | INFO     | sum of deviations: 3483755769.833333
[2026-03-17 13:08:08] 2026-03-17 17:07:28,231 | INFO     | mean x: 1773761721.5722222
[2026-03-17 13:08:08] 2026-03-17 17:07:28,231 | INFO     | mean y: 2670458.1666666665
[2026-03-17 13:08:08] 2026-03-17 17:07:28,231 | INFO     | intersect: -3414487283.5540214
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | chi2: 0.007602762528973717
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | current chi2=0.007602762528973717 (change=18.88637282167972 %)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | left removable region: 30
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | sum of square deviations: 1246370433.0943365
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | sum of deviations: 5261226758.792452
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | mean x: 1773761996.0754716
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | mean y: 2667491.1006289306
[2026-03-17 13:08:08] 2026-03-17 17:07:28,232 | INFO     | intersect: -7484804796.181271
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | chi2: 0.0007049858094284542
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | current memory leak: 4.22 B/s (using 159 data points, chi2=0.00)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | could have reported an average CPU frequency of 3800 MHz (10 samples)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | ..............................
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . Timing measurements:
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . get job = 0 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . initial setup = 44 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . payload setup = 47 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . stage-in = 0 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . payload execution = 11927 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . stage-out = 3 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | . log creation = 0 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,233 | INFO     | ..............................
[2026-03-17 13:08:08] 2026-03-17 17:07:28,292 | WARNING  | process 1391668 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 13:08:08] 2026-03-17 17:07:28,292 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7057100557/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,292 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7057100557/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,293 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-17 13:08:08] 2026-03-17 17:07:28,293 | WARNING  | maxPSS not found in memory monitor output
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | 
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | job summary report
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | --------------------------------------------------
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | PanDA job id: 7057100557
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | task id: 49176403
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | errors: (none)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | pilot state: finished 
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | transexitcode: 0
[2026-03-17 13:08:08] 2026-03-17 17:07:28,339 | INFO     | exeerrorcode: 0
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | exeerrordiag: 
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | exitcode: 0
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | exitmsg: OK
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | cpuconsumptiontime: 52749 s
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | nevents: 400
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | neventsw: 0
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | pid: 1391668
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | pgrp: 1391668
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | corecount: 11
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | event service: False
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | sizes: {0: 2279983, 1: 2280444, 11979: 2309802, 11983: 2318800, 11986: 2318856, 11987: 2319050}
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | --------------------------------------------------
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | 
[2026-03-17 13:08:08] 2026-03-17 17:07:28,340 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-17 13:08:08] 2026-03-17 17:07:28,423 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,423 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | job 7057100557 has completed (purged errors)
[2026-03-17 13:08:08] 2026-03-17 17:07:28,424 | INFO     | overall cleanup function is called
[2026-03-17 13:08:08] 2026-03-17 17:07:29,288 | INFO     | PID=1365845 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-17 13:08:08] 2026-03-17 17:07:29,288 | INFO     | .. there are 107 such processes running
[2026-03-17 13:08:08] 2026-03-17 17:07:29,437 | INFO     | --- collectZombieJob: --- 10, [1391668]
[2026-03-17 13:08:08] 2026-03-17 17:07:29,437 | INFO     | zombie collector waiting for pid 1391668
[2026-03-17 13:08:08] 2026-03-17 17:07:29,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 13:08:08] 2026-03-17 17:07:29,437 | INFO     | collected zombie processes
[2026-03-17 13:08:08] 2026-03-17 17:07:29,437 | INFO     | will attempt to kill all subprocesses of pid=1391668
[2026-03-17 13:08:08] 2026-03-17 17:07:30,202 | INFO     | number of running child processes to parent process 1391668: 1
[2026-03-17 13:08:08] 2026-03-17 17:07:30,203 | INFO     | maximum number of monitored processes: 7
[2026-03-17 13:08:08] 2026-03-17 17:07:30,203 | INFO     | aborting job monitoring since job object (job id=7057100557) has expired
[2026-03-17 13:08:08] 2026-03-17 17:07:30,855 | INFO     | process IDs to be killed: [1391668] (in reverse order)
[2026-03-17 13:08:08] 2026-03-17 17:07:31,181 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 13:08:08] 2026-03-17 17:07:31,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 13:08:08] 2026-03-17 17:07:31,237 | INFO     | did not find any defunct processes belonging to 1391668
[2026-03-17 13:08:08] 2026-03-17 17:07:31,281 | INFO     | did not find any defunct processes belonging to 1391668
[2026-03-17 13:08:08] 2026-03-17 17:07:31,281 | INFO     | ready for new job
[2026-03-17 13:08:08] 2026-03-17 17:07:31,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 13:08:08] 2026-03-17 17:07:31,283 | INFO     | **************************************
[2026-03-17 13:08:08] 2026-03-17 17:07:31,283 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 13:08:08] 2026-03-17 17:07:31,283 | INFO     | **************************************
[2026-03-17 13:08:08] 2026-03-17 17:07:31,283 | INFO     | 
[2026-03-17 13:08:08] 2026-03-17 17:07:31,287 | INFO     | architecture information:
[2026-03-17 13:08:08] 2026-03-17 17:07:31,291 | INFO     | executing command: cat /etc/os-release
[2026-03-17 13:08:08] 2026-03-17 17:07:31,385 | INFO     | cat /etc/os-release:
[2026-03-17 13:08:08] NAME="CentOS Linux"
[2026-03-17 13:08:08] VERSION="7 (Core)"
[2026-03-17 13:08:08] ID="centos"
[2026-03-17 13:08:08] ID_LIKE="rhel fedora"
[2026-03-17 13:08:08] VERSION_ID="7"
[2026-03-17 13:08:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 13:08:08] ANSI_COLOR="0;31"
[2026-03-17 13:08:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 13:08:08] HOME_URL="https://www.centos.org/"
[2026-03-17 13:08:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 13:08:08] 
[2026-03-17 13:08:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 13:08:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 13:08:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 13:08:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 13:08:08] 
[2026-03-17 13:08:08] 2026-03-17 17:07:31,386 | INFO     | **************************************
[2026-03-17 13:08:08] 2026-03-17 17:07:31,889 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-17 13:08:08] 2026-03-17 17:07:31,922 | INFO     | sufficient remaining disk space (169824223232 B)
[2026-03-17 13:08:08] 2026-03-17 17:07:31,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 13:08:08] 2026-03-17 17:07:31,923 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 13:08:08] 2026-03-17 17:07:31,923 | INFO     | update_server=False
[2026-03-17 13:08:08] 2026-03-17 17:07:31,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 13:08:08] 2026-03-17 17:07:31,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 13:08:08] 2026-03-17 17:07:31,923 | INFO     | aborting loop
[2026-03-17 13:08:08] 2026-03-17 17:07:32,095 | INFO     | all data control threads have been joined
[2026-03-17 13:08:08] 2026-03-17 17:07:32,221 | INFO     | all payload control threads have been joined
[2026-03-17 13:08:08] 2026-03-17 17:07:32,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 13:08:08] 2026-03-17 17:07:32,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 13:08:08] 2026-03-17 17:07:32,870 | INFO     | all job control threads have been joined
[2026-03-17 13:08:08] 2026-03-17 17:07:32,928 | INFO     | [job] retrieve thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:32,929 | INFO     | [job] job monitor thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:33,008 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:33,101 | INFO     | [data] control thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:33,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:33,170 | INFO     | [job] validate thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:33,226 | INFO     | [payload] control thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:33,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 13:08:08] 2026-03-17 17:07:33,640 | INFO     | [payload] validate_post thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:33,876 | INFO     | [job] control thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:34,100 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:34,197 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:34,289 | INFO     | [data] copytool_out thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:34,329 | INFO     | [payload] failed_post thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:34,389 | INFO     | [job] queue monitor thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:34,457 | INFO     | [data] copytool_in thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:36,835 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 13:08:08] 2026-03-17 17:07:59,744 | INFO     | [monitor] cgroup control has ended
[2026-03-17 13:08:08] 2026-03-17 17:08:01,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115611277120)>', '<ExcThread(monitor, started 140114978137856)>']
[2026-03-17 13:08:08] 2026-03-17 17:08:04,094 | INFO     | PID=1365845 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 13:08:08] 2026-03-17 17:08:04,094 | INFO     | .. there are 107 such processes running
[2026-03-17 13:08:08] 2026-03-17 17:08:04,094 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 13:08:08] 2026-03-17 17:08:04,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 13:08:08] 2026-03-17 17:08:04,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 13:08:08] 2026-03-17 17:08:04,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 13:08:08] 2026-03-17 17:08:04,095 | INFO     | [monitor] control thread has ended
[2026-03-17 13:08:08] 2026-03-17 17:08:06,479 | INFO     | all workflow threads have been joined
[2026-03-17 13:08:08] 2026-03-17 17:08:06,479 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 13:08:08] 2026-03-17 17:08:06,479 | INFO     | traces error code: 0
[2026-03-17 13:08:08] 2026-03-17 17:08:06,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 13:08:08] 2026-03-17 17:08:07,301 [wrapper] ==== pilot stdout END ====
[2026-03-17 13:08:08] 2026-03-17 17:08:07,319 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 13:08:08] 2026-03-17 17:08:07,331 [wrapper] pilotpid: 1365845
[2026-03-17 13:08:08] 2026-03-17 17:08:07,373 [wrapper] Pilot exit status: 0
[2026-03-17 13:08:08] 2026-03-17 17:08:07,506 [wrapper] pandaids: 7057100557
[2026-03-17 13:08:08] 2026-03-17 17:08:07,746 [wrapper] cleanup supervisor_pilot 3445179 1365846
[2026-03-17 13:08:08] 2026-03-17 17:08:07,768 [wrapper] Test setup, not cleaning
[2026-03-17 13:08:08] 2026-03-17 17:08:07,783 [wrapper] apfmon messages muted
[2026-03-17 13:08:08] 2026-03-17 17:08:07,825 [wrapper] ==== wrapper stdout END ====
[2026-03-17 13:08:08] 2026-03-17 17:08:07,842 [wrapper] ==== wrapper stderr END ====
[2026-03-17 13:08:08]  *** Error codes and diagnostics ***
[2026-03-17 13:08:08]     "exeErrorCode": 0,
[2026-03-17 13:08:08]     "exeErrorDiag": "",
[2026-03-17 13:08:08]     "pilotErrorCode": 0,
[2026-03-17 13:08:08]     "pilotErrorDiag": "",
[2026-03-17 13:08:08]  *** Listing of results directory ***
[2026-03-17 13:08:08] total 474784
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 20:55 pilot3.tar.gz
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 20:56 queuedata.json
[2026-03-17 13:08:08] -rwx------. 1 boincer umatlas     36322 Mar 16 20:56 runpilot2-wrapper.sh
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas       100 Mar 17 09:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 13:08:08] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 17 09:45 run_atlas
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas       105 Mar 17 09:45 job.xml
[2026-03-17 13:08:08] -rw-r--r--. 2 boincer umatlas 241465258 Mar 17 09:45 EVNT.49133848._000006.pool.root.1
[2026-03-17 13:08:08] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 09:45 start_atlas.sh
[2026-03-17 13:08:08] drwxrwx--x. 2 boincer umatlas      4096 Mar 17 09:45 shared
[2026-03-17 13:08:08] -rw-r--r--. 2 boincer umatlas    597565 Mar 17 09:45 input.tar.gz
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas         0 Mar 17 09:45 boinc_lockfile
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas      2721 Mar 17 09:45 pandaJob.out
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas        57 Mar 17 09:45 setup.sh.local
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas   1006434 Mar 17 09:46 agis_schedconf.cvmfs.json
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas       431 Mar 17 09:47 workernode_map.json
[2026-03-17 13:08:08] drwx------. 5 boincer umatlas      4096 Mar 17 09:47 pilot3
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas      7171 Mar 17 13:04 init_data.xml
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas 236980886 Mar 17 13:06 HITS.49176403._000139.pool.root.1
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas       531 Mar 17 13:06 boinc_task_state.xml
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas        95 Mar 17 13:07 pilot_heartbeat.json
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas      1043 Mar 17 13:07 memory_monitor_summary.json
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas   1511579 Mar 17 13:07 agis_ddmendpoints.agis.ALL.json
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas    461387 Mar 17 13:07 log.49176403._000139.job.log.tgz.1
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas      6336 Mar 17 13:07 heartbeat.json
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas        28 Mar 17 13:07 wrapper_checkpoint.txt
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas      8192 Mar 17 13:07 boinc_mmap_file
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas      4822 Mar 17 13:08 pilotlog.txt
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas   1442412 Mar 17 13:08 log.49176403._000139.job.log.1
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas       357 Mar 17 13:08 output.list
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas       620 Mar 17 13:08 runtime_log
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas   1925120 Mar 17 13:08 result.tar.gz
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas       655 Mar 17 13:08 sr5MDmyuXM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZXzLDmK2D9To.diag
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas      9339 Mar 17 13:08 runtime_log.err
[2026-03-17 13:08:08] -rw-r--r--. 1 boincer umatlas      4202 Mar 17 13:08 stderr.txt
[2026-03-17 13:08:08] HITS file was successfully produced:
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas 236980886 Mar 17 13:06 shared/HITS.pool.root.1
[2026-03-17 13:08:08]  *** Contents of shared directory: ***
[2026-03-17 13:08:08] total 469720
[2026-03-17 13:08:08] -rw-r--r--. 2 boincer umatlas 241465258 Mar 17 09:45 ATLAS.root_0
[2026-03-17 13:08:08] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 09:45 start_atlas.sh
[2026-03-17 13:08:08] -rw-r--r--. 2 boincer umatlas    597565 Mar 17 09:45 input.tar.gz
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas 236980886 Mar 17 13:06 HITS.pool.root.1
[2026-03-17 13:08:08] -rw-------. 1 boincer umatlas   1925120 Mar 17 13:08 result.tar.gz
13:08:09 (1346907): run_atlas exited; CPU time 53298.603068
13:08:09 (1346907): called boinc_finish(0)

</stderr_txt>
]]>

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