Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:50:38 (10761): wrapper (7.7.26015): starting
12:50:38 (10761): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 12:50:38] Arguments: --nthreads 8
[2026-03-17 12:50:38] Threads: 8
[2026-03-17 12:50:38] Checking for CVMFS
[2026-03-17 12:50:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 12:50:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 12:50:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 12:50:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 12:50:38] 2.11.0.0 3913 225319 94616 157370 3 188 4061223 4096001 1763 130560 2 14160487 99.591 14064373 450 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-17 12:50:38] CVMFS is ok
[2026-03-17 12:50:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 12:50:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 12:50:38] Further information can be found at the LHC@home message board.
[2026-03-17 12:50:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 12:50:38] Checking for apptainer binary...
[2026-03-17 12:50:38] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-17 12:50:38] apptainer is not installed, using version from CVMFS
[2026-03-17 12:50:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 12:50:38] WARNING: Environment variable TMPDIR already has value [/tmp/job_11326443/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node328
[2026-03-17 12:50:38] apptainer works
[2026-03-17 12:50:38] Set ATHENA_PROC_NUMBER=8
[2026-03-17 12:50:38] Set ATHENA_CORE_NUMBER=8
[2026-03-17 12:50:38] Starting ATLAS job with PandaID=7057052944
[2026-03-17 12:50:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11326443/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 14:38:01]  *** The last 200 lines of the pilot log: ***
[2026-03-17 14:38:01] 2026-03-17 13:37:26,386 | INFO     | added worker_node to metadata from /tmp/job_11326443/atlas/pilot/slots/0/workernode_map.json
[2026-03-17 14:38:01] 2026-03-17 13:37:26,386 | INFO     | this job has now completed (state=finished)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,386 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,387 | INFO     | log transfer has been attempted: DONE
[2026-03-17 14:38:01] 2026-03-17 13:37:26,387 | INFO     | job 7057052944 has finished - writing final server update
[2026-03-17 14:38:01] 2026-03-17 13:37:26,387 | INFO     | total number of processed events: 400 (read)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,404 | INFO     | using path: /tmp/job_11326443/atlas/pilot/slots/0/PanDA_Pilot-7057052944/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,404 | INFO     | extracted standard info from prmon json
[2026-03-17 14:38:01] 2026-03-17 13:37:26,405 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 14:38:01] 2026-03-17 13:37:26,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 14:38:01] 2026-03-17 13:37:26,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 14:38:01] 2026-03-17 13:37:26,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 14:38:01] 2026-03-17 13:37:26,406 | INFO     | fitting pss+swap vs Time
[2026-03-17 14:38:01] 2026-03-17 13:37:26,406 | INFO     | sum of square deviations: 358927660.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,406 | INFO     | sum of deviations: 13276825558.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,406 | INFO     | mean x: 1773751432.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,406 | INFO     | mean y: 2501727.6666666665
[2026-03-17 14:38:01] 2026-03-17 13:37:26,406 | INFO     | intersect: -65609015495.37682
[2026-03-17 14:38:01] 2026-03-17 13:37:26,406 | INFO     | chi2: 1.0941867102453338
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | sum of square deviations: 310052325.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | sum of deviations: 12431058911.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | mean x: 1773751279.5
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | mean y: 2499092.16
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | intersect: -71113260639.44699
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | chi2: 1.0958479708242927
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | current chi2=1.0958479708242927 (change=-0.15182606070827792 %)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | right removable region: 99
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | sum of square deviations: 310052325.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | sum of deviations: 1391208700.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,407 | INFO     | mean x: 1773751584.5
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | mean y: 2537854.36
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | intersect: -7956307917.866302
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | chi2: 0.0021260596782570486
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | current chi2=0.0021260596782570486 (change=99.8056949825519 %)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | sum of square deviations: 265828240.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | sum of deviations: 1410061176.9999998
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | mean x: 1773751737.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | mean y: 2537765.8421052634
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | intersect: -9406163363.804668
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | chi2: 0.0017221147495343635
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | current chi2=0.0017221147495343635 (change=18.999698496414773 %)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | left removable region: 20
[2026-03-17 14:38:01] 2026-03-17 13:37:26,408 | INFO     | sum of square deviations: 152858680.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | sum of deviations: 1242278725.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | mean x: 1773751859.0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | mean y: 2536323.329113924
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | intersect: -14412701318.817867
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | chi2: 0.00023736295344376068
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | current memory leak: 8.13 B/s (using 79 data points, chi2=0.00)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | could have reported an average CPU frequency of 2489 MHz (7 samples)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | ..............................
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . Timing measurements:
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . get job = 0 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . initial setup = 2 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . payload setup = 2 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . stage-in = 0 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . payload execution = 6380 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . stage-out = 0 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | . log creation = 0 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,409 | INFO     | ..............................
[2026-03-17 14:38:01] 2026-03-17 13:37:26,455 | INFO     | 
[2026-03-17 14:38:01] 2026-03-17 13:37:26,455 | INFO     | job summary report
[2026-03-17 14:38:01] 2026-03-17 13:37:26,455 | INFO     | --------------------------------------------------
[2026-03-17 14:38:01] 2026-03-17 13:37:26,455 | INFO     | PanDA job id: 7057052944
[2026-03-17 14:38:01] 2026-03-17 13:37:26,455 | INFO     | task id: 49176702
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | errors: (none)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | pilot state: finished 
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | transexitcode: 0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | exeerrorcode: 0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | exeerrordiag: 
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | exitcode: 0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | exitmsg: OK
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | cpuconsumptiontime: 46380 s
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | nevents: 400
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | neventsw: 0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | pid: 19020
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | pgrp: 19020
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | corecount: 8
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | event service: False
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | sizes: {0: 2280451, 11: 2280451, 6386: 2307659, 6387: 2316743, 6390: 2316881}
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | --------------------------------------------------
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | 
[2026-03-17 14:38:01] 2026-03-17 13:37:26,456 | INFO     | executing command: ls -lF /tmp/job_11326443/atlas/pilot/slots/0
[2026-03-17 14:38:01] 2026-03-17 13:37:26,465 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | job 7057052944 has completed (purged errors)
[2026-03-17 14:38:01] 2026-03-17 13:37:26,466 | INFO     | overall cleanup function is called
[2026-03-17 14:38:01] 2026-03-17 13:37:27,188 | WARNING  | process 19020 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 14:38:01] 2026-03-17 13:37:27,270 | INFO     | using path: /tmp/job_11326443/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 14:38:01] 2026-03-17 13:37:27,368 | INFO     | number of running child processes to parent process 19020: 1
[2026-03-17 14:38:01] 2026-03-17 13:37:27,368 | INFO     | maximum number of monitored processes: 6
[2026-03-17 14:38:01] 2026-03-17 13:37:27,368 | INFO     | aborting job monitoring since job object (job id=7057052944) has expired
[2026-03-17 14:38:01] 2026-03-17 13:37:27,472 | INFO     | --- collectZombieJob: --- 10, [19020]
[2026-03-17 14:38:01] 2026-03-17 13:37:27,472 | INFO     | zombie collector waiting for pid 19020
[2026-03-17 14:38:01] 2026-03-17 13:37:27,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 14:38:01] 2026-03-17 13:37:27,472 | INFO     | collected zombie processes
[2026-03-17 14:38:01] 2026-03-17 13:37:27,472 | INFO     | will attempt to kill all subprocesses of pid=19020
[2026-03-17 14:38:01] 2026-03-17 13:37:27,569 | INFO     | process IDs to be killed: [19020] (in reverse order)
[2026-03-17 14:38:01] 2026-03-17 13:37:27,605 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 14:38:01] 2026-03-17 13:37:27,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 14:38:01] 2026-03-17 13:37:27,609 | INFO     | did not find any defunct processes belonging to 19020
[2026-03-17 14:38:01] 2026-03-17 13:37:27,612 | INFO     | did not find any defunct processes belonging to 19020
[2026-03-17 14:38:01] 2026-03-17 13:37:27,612 | INFO     | ready for new job
[2026-03-17 14:38:01] 2026-03-17 13:37:27,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 14:38:01] 2026-03-17 13:37:27,613 | INFO     | **************************************
[2026-03-17 14:38:01] 2026-03-17 13:37:27,613 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 14:38:01] 2026-03-17 13:37:27,613 | INFO     | **************************************
[2026-03-17 14:38:01] 2026-03-17 13:37:27,613 | INFO     | 
[2026-03-17 14:38:01] 2026-03-17 13:37:27,627 | INFO     | architecture information:
[2026-03-17 14:38:01] 2026-03-17 13:37:27,627 | INFO     | executing command: cat /etc/os-release
[2026-03-17 14:38:01] 2026-03-17 13:37:27,632 | INFO     | cat /etc/os-release:
[2026-03-17 14:38:01] NAME="CentOS Linux"
[2026-03-17 14:38:01] VERSION="7 (Core)"
[2026-03-17 14:38:01] ID="centos"
[2026-03-17 14:38:01] ID_LIKE="rhel fedora"
[2026-03-17 14:38:01] VERSION_ID="7"
[2026-03-17 14:38:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 14:38:01] ANSI_COLOR="0;31"
[2026-03-17 14:38:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 14:38:01] HOME_URL="https://www.centos.org/"
[2026-03-17 14:38:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 14:38:01] 
[2026-03-17 14:38:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 14:38:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 14:38:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 14:38:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 14:38:01] 
[2026-03-17 14:38:01] 2026-03-17 13:37:27,632 | INFO     | **************************************
[2026-03-17 14:38:01] 2026-03-17 13:37:28,135 | INFO     | executing command: df -mP /tmp/job_11326443/atlas/pilot/slots/0
[2026-03-17 14:38:01] 2026-03-17 13:37:28,140 | INFO     | sufficient remaining disk space (224595542016 B)
[2026-03-17 14:38:01] 2026-03-17 13:37:28,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 14:38:01] 2026-03-17 13:37:28,140 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 14:38:01] 2026-03-17 13:37:28,140 | INFO     | update_server=False
[2026-03-17 14:38:01] 2026-03-17 13:37:28,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 14:38:01] 2026-03-17 13:37:28,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:38:01] 2026-03-17 13:37:28,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:38:01] 2026-03-17 13:37:28,141 | INFO     | will abort loop
[2026-03-17 14:38:01] 2026-03-17 13:37:28,326 | INFO     | all payload control threads have been joined
[2026-03-17 14:38:01] 2026-03-17 13:37:28,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 14:38:01] 2026-03-17 13:37:28,759 | INFO     | all data control threads have been joined
[2026-03-17 14:38:01] 2026-03-17 13:37:29,043 | INFO     | all job control threads have been joined
[2026-03-17 14:38:01] 2026-03-17 13:37:29,146 | INFO     | [job] retrieve thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,146 | INFO     | [job] queue monitor thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,146 | INFO     | [job] job monitor thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,331 | INFO     | [payload] control thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,401 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,648 | INFO     | [payload] failed_post thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,682 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 14:38:01] 2026-03-17 13:37:29,765 | INFO     | [data] control thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,778 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,808 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:29,821 | INFO     | [job] validate thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:30,018 | INFO     | [data] copytool_in thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:30,048 | INFO     | [job] control thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:30,092 | INFO     | [payload] validate_post thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:30,632 | INFO     | [data] copytool_out thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:33,723 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 14:38:01] 2026-03-17 13:37:55,152 | INFO     | [monitor] cgroup control has ended
[2026-03-17 14:38:01] 2026-03-17 13:37:56,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067393280)>']
[2026-03-17 14:38:01] 2026-03-17 13:37:58,407 | INFO     | PID=14520 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-17 14:38:01] 2026-03-17 13:37:58,407 | INFO     | .. there are 2 such processes running
[2026-03-17 14:38:01] 2026-03-17 13:37:58,407 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 14:38:01] 2026-03-17 13:37:58,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 14:38:01] 2026-03-17 13:37:58,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 14:38:01] 2026-03-17 13:37:58,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 14:38:01] 2026-03-17 13:37:58,407 | INFO     | [monitor] control thread has ended
[2026-03-17 14:38:01] 2026-03-17 13:38:01,182 | INFO     | all workflow threads have been joined
[2026-03-17 14:38:01] 2026-03-17 13:38:01,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 14:38:01] 2026-03-17 13:38:01,182 | INFO     | traces error code: 0
[2026-03-17 14:38:01] 2026-03-17 13:38:01,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 14:38:01] 2026-03-17 13:38:01,236 [wrapper] ==== pilot stdout END ====
[2026-03-17 14:38:01] 2026-03-17 13:38:01,237 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 14:38:01] 2026-03-17 13:38:01,238 [wrapper] pilotpid: 14520
[2026-03-17 14:38:01] 2026-03-17 13:38:01,239 [wrapper] Pilot exit status: 0
[2026-03-17 14:38:01] 2026-03-17 13:38:01,243 [wrapper] pandaids: 7057052944
[2026-03-17 14:38:01] 2026-03-17 13:38:01,267 [wrapper] cleanup supervisor_pilot 17323 14521
[2026-03-17 14:38:01] 2026-03-17 13:38:01,269 [wrapper] Test setup, not cleaning
[2026-03-17 14:38:01] 2026-03-17 13:38:01,270 [wrapper] apfmon messages muted
[2026-03-17 14:38:01] 2026-03-17 13:38:01,271 [wrapper] ==== wrapper stdout END ====
[2026-03-17 14:38:01] 2026-03-17 13:38:01,272 [wrapper] ==== wrapper stderr END ====
[2026-03-17 14:38:01]  *** Error codes and diagnostics ***
[2026-03-17 14:38:01]     "exeErrorCode": 0,
[2026-03-17 14:38:01]     "exeErrorDiag": "",
[2026-03-17 14:38:01]     "pilotErrorCode": 0,
[2026-03-17 14:38:01]     "pilotErrorDiag": "",
[2026-03-17 14:38:01]  *** Listing of results directory ***
[2026-03-17 14:38:01] total 465008
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user    585013 Mar 17 01:35 pilot3.tar.gz
[2026-03-17 14:38:01] -rwx------ 1 mf493845 unix-user     36322 Mar 17 01:37 runpilot2-wrapper.sh
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      5111 Mar 17 01:40 queuedata.json
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user       100 Mar 17 11:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 14:38:01] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 17 11:49 run_atlas
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user       105 Mar 17 11:49 job.xml
[2026-03-17 14:38:01] drwxrwx--x 2 mf493845 unix-user       100 Mar 17 12:50 shared
[2026-03-17 14:38:01] -rw-r--r-- 2 mf493845 unix-user    597549 Mar 17 12:50 input.tar.gz
[2026-03-17 14:38:01] -rw-r--r-- 2 mf493845 unix-user 240220133 Mar 17 12:50 EVNT.49134905._000005.pool.root.1
[2026-03-17 14:38:01] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 12:50 start_atlas.sh
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      6390 Mar 17 12:50 init_data.xml
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user         0 Mar 17 12:50 boinc_setup_complete
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      8192 Mar 17 12:50 boinc_mmap_file
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user         0 Mar 17 12:50 boinc_lockfile
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      2636 Mar 17 12:50 pandaJob.out
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user   1006434 Mar 17 12:50 agis_schedconf.cvmfs.json
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user   1511579 Mar 17 12:50 agis_ddmendpoints.agis.ALL.json
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user       414 Mar 17 12:50 workernode_map.json
[2026-03-17 14:38:01] drwx------ 5 mf493845 unix-user       440 Mar 17 12:50 pilot3
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user 229459842 Mar 17 14:36 HITS.49176702._000104.pool.root.1
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user        95 Mar 17 14:37 pilot_heartbeat.json
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      1020 Mar 17 14:37 memory_monitor_summary.json
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user    339192 Mar 17 14:37 log.49176702._000104.job.log.tgz.1
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      6301 Mar 17 14:37 heartbeat.json
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      4833 Mar 17 14:38 pilotlog.txt
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user    950053 Mar 17 14:38 log.49176702._000104.job.log.1
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user       357 Mar 17 14:38 output.list
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user       620 Mar 17 14:38 runtime_log
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user   1310720 Mar 17 14:38 result.tar.gz
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user      9219 Mar 17 14:38 runtime_log.err
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user       644 Mar 17 14:38 Aq9MDm3bXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmzMwLDmKqRPjm.diag
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user     21727 Mar 17 14:38 stderr.txt
[2026-03-17 14:38:01] HITS file was successfully produced:
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user 229459842 Mar 17 14:36 shared/HITS.pool.root.1
[2026-03-17 14:38:01]  *** Contents of shared directory: ***
[2026-03-17 14:38:01] total 460556
[2026-03-17 14:38:01] -rw-r--r-- 2 mf493845 unix-user    597549 Mar 17 12:50 input.tar.gz
[2026-03-17 14:38:01] -rw-r--r-- 2 mf493845 unix-user 240220133 Mar 17 12:50 ATLAS.root_0
[2026-03-17 14:38:01] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 17 12:50 start_atlas.sh
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user 229459842 Mar 17 14:36 HITS.pool.root.1
[2026-03-17 14:38:01] -rw------- 1 mf493845 unix-user   1310720 Mar 17 14:38 result.tar.gz
14:38:02 (10761): run_atlas exited; CPU time 46483.886068
14:38:02 (10761): called boinc_finish(0)

</stderr_txt>
]]>

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