Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:39:57 (15557): wrapper (7.7.26015): starting
07:39:57 (15557): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 07:39:57] Arguments: --nthreads 8
[2026-03-18 07:39:57] Threads: 8
[2026-03-18 07:39:57] Checking for CVMFS
[2026-03-18 07:39:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 07:40:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 07:40:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 07:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 07:40:02] 2.11.2.0 5634 132964 137504 157405 1 53 24305803 25165825 4484 130560 152 37017696 99.812 31020347 1049 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 07:40:02] CVMFS is ok
[2026-03-18 07:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 07:40:02] Checking for apptainer binary...
[2026-03-18 07:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 07:40:02] Running /usr/bin/apptainer --version
[2026-03-18 07:40:02] apptainer version 1.3.2-1.el7
[2026-03-18 07:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 07:40:24] cg-vwn416.simple-grid.lan
[2026-03-18 07:40:24] apptainer works
[2026-03-18 07:40:24] Set ATHENA_PROC_NUMBER=8
[2026-03-18 07:40:24] Set ATHENA_CORE_NUMBER=8
[2026-03-18 07:40:24] Starting ATLAS job with PandaID=7057026041
[2026-03-18 07:40:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 15:07:44]  *** The last 200 lines of the pilot log: ***
[2026-03-18 15:07:44] 2026-03-18 14:06:29,970 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 15:07:44] 2026-03-18 14:06:29,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 15:07:44] 2026-03-18 14:06:29,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 15:07:44] 2026-03-18 14:06:29,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 15:07:44] 2026-03-18 14:06:29,984 | INFO     | fitting pss+swap vs Time
[2026-03-18 15:07:44] 2026-03-18 14:06:29,985 | INFO     | sum of square deviations: 24482059030.0
[2026-03-18 15:07:44] 2026-03-18 14:06:29,990 | INFO     | sum of deviations: 235415535452.99994
[2026-03-18 15:07:44] 2026-03-18 14:06:29,990 | INFO     | mean x: 1773829706.0
[2026-03-18 15:07:44] 2026-03-18 14:06:29,990 | INFO     | mean y: 2456787.7296037297
[2026-03-18 15:07:44] 2026-03-18 14:06:29,991 | INFO     | intersect: -17054403892.52289
[2026-03-18 15:07:44] 2026-03-18 14:06:29,991 | INFO     | chi2: 7.361926411960289
[2026-03-18 15:07:44] 2026-03-18 14:06:29,992 | INFO     | sum of square deviations: 23635978050.0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,003 | INFO     | sum of deviations: 260748411655.5
[2026-03-18 15:07:44] 2026-03-18 14:06:30,003 | INFO     | mean x: 1773829553.5
[2026-03-18 15:07:44] 2026-03-18 14:06:30,003 | INFO     | mean y: 2461305.0400943398
[2026-03-18 15:07:44] 2026-03-18 14:06:30,003 | INFO     | intersect: -19566148787.771774
[2026-03-18 15:07:44] 2026-03-18 14:06:30,004 | INFO     | chi2: 6.619418082672824
[2026-03-18 15:07:44] 2026-03-18 14:06:30,004 | INFO     | current chi2=6.619418082672824 (change=10.085788525149834 %)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,004 | INFO     | right removable region: 423
[2026-03-18 15:07:44] 2026-03-18 14:06:30,005 | INFO     | sum of square deviations: 23635978050.0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,010 | INFO     | sum of deviations: 79511061982.5
[2026-03-18 15:07:44] 2026-03-18 14:06:30,010 | INFO     | mean x: 1773829858.5
[2026-03-18 15:07:44] 2026-03-18 14:06:30,010 | INFO     | mean y: 2484882.771226415
[2026-03-18 15:07:44] 2026-03-18 14:06:30,010 | INFO     | intersect: -5964651130.26982
[2026-03-18 15:07:44] 2026-03-18 14:06:30,011 | INFO     | chi2: 2.35125247645147
[2026-03-18 15:07:44] 2026-03-18 14:06:30,011 | INFO     | current chi2=2.35125247645147 (change=68.06199430856043 %)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,012 | INFO     | sum of square deviations: 22809618370.0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,017 | INFO     | sum of deviations: 3070902565.0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,017 | INFO     | mean x: 1773830011.0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,017 | INFO     | mean y: 2498938.198090692
[2026-03-18 15:07:44] 2026-03-18 14:06:30,018 | INFO     | intersect: -236315190.2232029
[2026-03-18 15:07:44] 2026-03-18 14:06:30,023 | INFO     | chi2: 0.8632353801309556
[2026-03-18 15:07:44] 2026-03-18 14:06:30,024 | INFO     | current chi2=0.8632353801309556 (change=63.28614690355339 %)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,024 | INFO     | sum of square deviations: 22002747427.5
[2026-03-18 15:07:44] 2026-03-18 14:06:30,029 | INFO     | sum of deviations: -3026904271.499996
[2026-03-18 15:07:44] 2026-03-18 14:06:30,030 | INFO     | mean x: 1773830163.5
[2026-03-18 15:07:44] 2026-03-18 14:06:30,030 | INFO     | mean y: 2500088.65942029
[2026-03-18 15:07:44] 2026-03-18 14:06:30,030 | INFO     | intersect: 246524800.41441715
[2026-03-18 15:07:44] 2026-03-18 14:06:30,031 | INFO     | chi2: 0.8561345424979085
[2026-03-18 15:07:44] 2026-03-18 14:06:30,031 | INFO     | current chi2=0.8561345424979085 (change=0.8225841753578045 %)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,031 | INFO     | left removable region: 30
[2026-03-18 15:07:44] 2026-03-18 14:06:30,031 | INFO     | sum of square deviations: 18821458012.0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,036 | INFO     | sum of deviations: 38502307692.000015
[2026-03-18 15:07:44] 2026-03-18 14:06:30,036 | INFO     | mean x: 1773830438.0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,037 | INFO     | mean y: 2502391.475826972
[2026-03-18 15:07:44] 2026-03-18 14:06:30,037 | INFO     | intersect: -3626151949.4241877
[2026-03-18 15:07:44] 2026-03-18 14:06:30,037 | INFO     | chi2: 0.002364479048245409
[2026-03-18 15:07:44] 2026-03-18 14:06:30,038 | INFO     | current memory leak: 2.05 B/s (using 393 data points, chi2=0.00)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,038 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,038 | INFO     | ..............................
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . Timing measurements:
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . get job = 0 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . initial setup = 107 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . payload setup = 182 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . stage-in = 0 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . payload execution = 26249 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . stage-out = 2 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | . log creation = 0 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,039 | INFO     | ..............................
[2026-03-18 15:07:44] 2026-03-18 14:06:30,270 | INFO     | 
[2026-03-18 15:07:44] 2026-03-18 14:06:30,270 | INFO     | job summary report
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | --------------------------------------------------
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | PanDA job id: 7057026041
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | task id: 49176446
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | errors: (none)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | pilot state: finished 
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | transexitcode: 0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | exeerrorcode: 0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | exeerrordiag: 
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | exitcode: 0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | exitmsg: OK
[2026-03-18 15:07:44] 2026-03-18 14:06:30,271 | INFO     | cpuconsumptiontime: 103908 s
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | nevents: 400
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | neventsw: 0
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | pid: 24161
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | pgrp: 24161
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | corecount: 8
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | event service: False
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | sizes: {0: 2279193, 1: 2280251, 2: 2280339, 26435: 2316498, 26436: 2316497, 26439: 2325873}
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | --------------------------------------------------
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | 
[2026-03-18 15:07:44] 2026-03-18 14:06:30,272 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-18 15:07:44] 2026-03-18 14:06:30,320 | WARNING  | process 24161 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 15:07:44] 2026-03-18 14:06:30,321 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7057026041/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,488 | INFO     | number of running child processes to parent process 24161: 1
[2026-03-18 15:07:44] 2026-03-18 14:06:30,489 | INFO     | maximum number of monitored processes: 7
[2026-03-18 15:07:44] 2026-03-18 14:06:30,489 | INFO     | aborting job monitoring since job object (job id=7057026041) has expired
[2026-03-18 15:07:44] 2026-03-18 14:06:30,954 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,954 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,954 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,954 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,956 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 15:07:44] 2026-03-18 14:06:30,957 | INFO     | job 7057026041 has completed (purged errors)
[2026-03-18 15:07:44] 2026-03-18 14:06:30,957 | INFO     | overall cleanup function is called
[2026-03-18 15:07:44] 2026-03-18 14:06:31,972 | INFO     | --- collectZombieJob: --- 10, [24161]
[2026-03-18 15:07:44] 2026-03-18 14:06:31,972 | INFO     | zombie collector waiting for pid 24161
[2026-03-18 15:07:44] 2026-03-18 14:06:31,973 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 15:07:44] 2026-03-18 14:06:31,973 | INFO     | collected zombie processes
[2026-03-18 15:07:44] 2026-03-18 14:06:31,973 | INFO     | will attempt to kill all subprocesses of pid=24161
[2026-03-18 15:07:44] 2026-03-18 14:06:32,091 | INFO     | process IDs to be killed: [24161] (in reverse order)
[2026-03-18 15:07:44] 2026-03-18 14:06:32,994 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 15:07:44] 2026-03-18 14:06:32,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 15:07:44] 2026-03-18 14:06:32,997 | INFO     | did not find any defunct processes belonging to 24161
[2026-03-18 15:07:44] 2026-03-18 14:06:33,001 | INFO     | did not find any defunct processes belonging to 24161
[2026-03-18 15:07:44] 2026-03-18 14:06:33,001 | INFO     | ready for new job
[2026-03-18 15:07:44] 2026-03-18 14:06:33,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 15:07:44] 2026-03-18 14:06:33,004 | INFO     | **************************************
[2026-03-18 15:07:44] 2026-03-18 14:06:33,004 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 15:07:44] 2026-03-18 14:06:33,005 | INFO     | **************************************
[2026-03-18 15:07:44] 2026-03-18 14:06:33,005 | INFO     | 
[2026-03-18 15:07:44] 2026-03-18 14:06:33,006 | INFO     | pilot is running in a VM
[2026-03-18 15:07:44] 2026-03-18 14:06:33,007 | INFO     | architecture information:
[2026-03-18 15:07:44] 2026-03-18 14:06:33,007 | INFO     | executing command: cat /etc/os-release
[2026-03-18 15:07:44] 2026-03-18 14:06:33,211 | INFO     | cat /etc/os-release:
[2026-03-18 15:07:44] NAME="CentOS Linux"
[2026-03-18 15:07:44] VERSION="7 (Core)"
[2026-03-18 15:07:44] ID="centos"
[2026-03-18 15:07:44] ID_LIKE="rhel fedora"
[2026-03-18 15:07:44] VERSION_ID="7"
[2026-03-18 15:07:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 15:07:44] ANSI_COLOR="0;31"
[2026-03-18 15:07:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 15:07:44] HOME_URL="https://www.centos.org/"
[2026-03-18 15:07:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 15:07:44] 
[2026-03-18 15:07:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 15:07:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 15:07:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 15:07:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 15:07:44] 
[2026-03-18 15:07:44] 2026-03-18 14:06:33,211 | INFO     | **************************************
[2026-03-18 15:07:44] 2026-03-18 14:06:33,714 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-18 15:07:44] 2026-03-18 14:06:33,923 | INFO     | sufficient remaining disk space (495840133120 B)
[2026-03-18 15:07:44] 2026-03-18 14:06:33,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 15:07:44] 2026-03-18 14:06:33,923 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 15:07:44] 2026-03-18 14:06:33,924 | INFO     | update_server=False
[2026-03-18 15:07:44] 2026-03-18 14:06:33,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 15:07:44] 2026-03-18 14:06:33,997 | INFO     | all job control threads have been joined
[2026-03-18 15:07:44] 2026-03-18 14:06:34,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 15:07:44] 2026-03-18 14:06:34,011 | INFO     | aborting loop
[2026-03-18 15:07:44] 2026-03-18 14:06:34,380 | INFO     | all payload control threads have been joined
[2026-03-18 15:07:44] 2026-03-18 14:06:34,423 | INFO     | all data control threads have been joined
[2026-03-18 15:07:44] 2026-03-18 14:06:34,929 | INFO     | [job] retrieve thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,003 | INFO     | [job] control thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,016 | INFO     | [job] job monitor thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,209 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 15:07:44] 2026-03-18 14:06:35,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 15:07:44] 2026-03-18 14:06:35,386 | INFO     | [payload] control thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,429 | INFO     | [data] control thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,468 | INFO     | [data] copytool_in thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,546 | INFO     | [payload] failed_post thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,607 | INFO     | [job] validate thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,608 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,860 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,914 | INFO     | [payload] validate_post thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:35,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 15:07:44] 2026-03-18 14:06:36,288 | INFO     | [job] queue monitor thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:36,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:37,352 | INFO     | [data] copytool_out thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:06:39,983 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 15:07:44] 2026-03-18 14:07:02,610 | INFO     | PID=19656 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 15:07:44] 2026-03-18 14:07:02,610 | INFO     | .. there are 9 such processes running
[2026-03-18 15:07:44] 2026-03-18 14:07:02,611 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 15:07:44] 2026-03-18 14:07:02,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 15:07:44] 2026-03-18 14:07:02,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 15:07:44] 2026-03-18 14:07:34,003 | INFO     | [monitor] cgroup control has ended
[2026-03-18 15:07:44] 2026-03-18 14:07:36,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677106153280)>', '<ExcThread(monitor, started 139676656576256)>']
[2026-03-18 15:07:44] 2026-03-18 14:07:36,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 15:07:44] 2026-03-18 14:07:36,813 | INFO     | [monitor] control thread has ended
[2026-03-18 15:07:44] 2026-03-18 14:07:41,038 | INFO     | all workflow threads have been joined
[2026-03-18 15:07:44] 2026-03-18 14:07:41,038 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 15:07:44] 2026-03-18 14:07:41,039 | INFO     | traces error code: 0
[2026-03-18 15:07:44] 2026-03-18 14:07:41,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 15:07:44] 2026-03-18 14:07:41,386 [wrapper] ==== pilot stdout END ====
[2026-03-18 15:07:44] 2026-03-18 14:07:41,475 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 15:07:44] 2026-03-18 14:07:41,561 [wrapper] pilotpid: 19656
[2026-03-18 15:07:44] 2026-03-18 14:07:41,646 [wrapper] Pilot exit status: 0
[2026-03-18 15:07:44] 2026-03-18 14:07:41,774 [wrapper] pandaids: 7057026041
[2026-03-18 15:07:44] 2026-03-18 14:07:41,854 [wrapper] cleanup supervisor_pilot  2220 19657
[2026-03-18 15:07:44] 2026-03-18 14:07:41,989 [wrapper] Test setup, not cleaning
[2026-03-18 15:07:44] 2026-03-18 14:07:42,106 [wrapper] apfmon messages muted
[2026-03-18 15:07:44] 2026-03-18 14:07:42,237 [wrapper] ==== wrapper stdout END ====
[2026-03-18 15:07:44] 2026-03-18 14:07:42,339 [wrapper] ==== wrapper stderr END ====
[2026-03-18 15:07:44]  *** Error codes and diagnostics ***
[2026-03-18 15:07:44]     "exeErrorCode": 0,
[2026-03-18 15:07:44]     "exeErrorDiag": "",
[2026-03-18 15:07:44]     "pilotErrorCode": 0,
[2026-03-18 15:07:44]     "pilotErrorDiag": "",
[2026-03-18 15:07:44]  *** Listing of results directory ***
[2026-03-18 15:07:44] total 412780
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc    585013 Mar 17 01:35 pilot3.tar.gz
[2026-03-18 15:07:44] -rwx------. 1 boinc boinc     36322 Mar 17 01:37 runpilot2-wrapper.sh
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc      5111 Mar 17 01:39 queuedata.json
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc       100 Mar 18 07:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 15:07:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 07:39 run_atlas
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc       105 Mar 18 07:39 job.xml
[2026-03-18 15:07:44] -rw-r--r--. 2 boinc boinc 218951114 Mar 18 07:39 EVNT.49134019._000003.pool.root.1
[2026-03-18 15:07:44] -rw-r--r--. 2 boinc boinc    597536 Mar 18 07:39 input.tar.gz
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc      6391 Mar 18 07:39 init_data.xml
[2026-03-18 15:07:44] -rw-r--r--. 2 boinc boinc     15845 Mar 18 07:39 start_atlas.sh
[2026-03-18 15:07:44] drwxrwx--x. 2 boinc boinc        68 Mar 18 07:39 shared
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc         0 Mar 18 07:39 boinc_lockfile
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc      2602 Mar 18 07:40 pandaJob.out
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc       415 Mar 18 07:45 workernode_map.json
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc   1011507 Mar 18 07:45 agis_schedconf.cvmfs.json
[2026-03-18 15:07:44] drwx------. 5 boinc boinc      4096 Mar 18 07:45 pilot3
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc 191256887 Mar 18 15:05 HITS.49176446._000067.pool.root.1
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc       532 Mar 18 15:05 boinc_task_state.xml
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc      1011 Mar 18 15:06 memory_monitor_summary.json
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc   1511579 Mar 18 15:06 agis_ddmendpoints.agis.ALL.json
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc    630904 Mar 18 15:06 log.49176446._000067.job.log.tgz.1
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc      6305 Mar 18 15:06 heartbeat.json
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc        95 Mar 18 15:07 pilot_heartbeat.json
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc      8192 Mar 18 15:07 boinc_mmap_file
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc        29 Mar 18 15:07 wrapper_checkpoint.txt
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc      4880 Mar 18 15:07 pilotlog.txt
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc   3646095 Mar 18 15:07 log.49176446._000067.job.log.1
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc       357 Mar 18 15:07 output.list
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc       620 Mar 18 15:07 runtime_log
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc   4290560 Mar 18 15:07 result.tar.gz
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc       658 Mar 18 15:07 zLOODmnbXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnLwLDm1pL82m.diag
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc      8816 Mar 18 15:07 runtime_log.err
[2026-03-18 15:07:44] -rw-r--r--. 1 boinc boinc     20748 Mar 18 15:07 stderr.txt
[2026-03-18 15:07:44] HITS file was successfully produced:
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc 191256887 Mar 18 15:05 shared/HITS.pool.root.1
[2026-03-18 15:07:44]  *** Contents of shared directory: ***
[2026-03-18 15:07:44] total 405388
[2026-03-18 15:07:44] -rw-r--r--. 2 boinc boinc 218951114 Mar 18 07:39 ATLAS.root_0
[2026-03-18 15:07:44] -rw-r--r--. 2 boinc boinc    597536 Mar 18 07:39 input.tar.gz
[2026-03-18 15:07:44] -rw-r--r--. 2 boinc boinc     15845 Mar 18 07:39 start_atlas.sh
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc 191256887 Mar 18 15:05 HITS.pool.root.1
[2026-03-18 15:07:44] -rw-------. 1 boinc boinc   4290560 Mar 18 15:07 result.tar.gz
15:07:45 (15557): run_atlas exited; CPU time 104328.795305
15:07:45 (15557): called boinc_finish(0)

</stderr_txt>
]]>

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