Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-20 16:50:05 (3664278): vboxwrapper version 26210
2026-03-20 16:50:05 (3664278): BOINC client version: 7.20.5
2026-03-20 16:50:05 (3664278): Detected: VirtualBox VboxManage Interface (Version: 7.0.26)
2026-03-20 16:50:06 (3664278): Successfully copied 'init_data.xml' to the shared directory.
2026-03-20 16:50:06 (3664278): Create VM. (boinc_e631be764dc6905a, slot#1)
2026-03-20 16:50:06 (3664278): Setting Memory Size for VM. (4800MB)
2026-03-20 16:50:06 (3664278): Setting CPU Count for VM. (8)
2026-03-20 16:50:06 (3664278): Setting Chipset Options for VM.
2026-03-20 16:50:06 (3664278): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-20 16:50:06 (3664278): Setting Boot Options for VM.
2026-03-20 16:50:06 (3664278): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-20 16:50:06 (3664278): Enabling VM Network Access.
2026-03-20 16:50:07 (3664278): Disabling USB Support for VM.
2026-03-20 16:50:07 (3664278): Disabling COM Port Support for VM.
2026-03-20 16:50:07 (3664278): Disabling LPT Port Support for VM.
2026-03-20 16:50:07 (3664278): Disabling Audio Support for VM.
2026-03-20 16:50:07 (3664278): Disabling Clipboard Support for VM.
2026-03-20 16:50:07 (3664278): Disabling Drag and Drop Support for VM.
2026-03-20 16:50:07 (3664278): Adding storage controller(s) to VM.
2026-03-20 16:50:07 (3664278): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-20 16:50:07 (3664278): Adding VirtualBox Guest Additions to VM.
2026-03-20 16:50:07 (3664278): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-20 16:50:08 (3664278): forwarding host port 40965 to guest port 80
2026-03-20 16:50:08 (3664278): Enabling remote desktop for VM.
2026-03-20 16:50:08 (3664278): Required extension pack not installed, remote desktop not enabled.
2026-03-20 16:50:08 (3664278): Enabling shared directory for VM.
2026-03-20 16:50:08 (3664278): Starting VM using VBoxManage interface. (boinc_e631be764dc6905a, slot#1)
2026-03-20 16:50:09 (3664278): Successfully started VM. (PID = '3664756')
2026-03-20 16:50:09 (3664278): Reporting VM Process ID to BOINC.
2026-03-20 16:50:09 (3664278): Guest Log: BIOS: VirtualBox 7.0.26
2026-03-20 16:50:09 (3664278): Guest Log: CPUID EDX: 0x178bfbff
2026-03-20 16:50:09 (3664278): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-20 16:50:09 (3664278): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-20 16:50:09 (3664278): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-20 16:50:09 (3664278): Detected: Web Application Enabled (http://localhost:40965)
2026-03-20 16:50:09 (3664278): Preference change detected
2026-03-20 16:50:09 (3664278): Setting CPU throttle for VM. (100%)
2026-03-20 16:50:09 (3664278): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-20 16:50:11 (3664278): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-20 16:50:11 (3664278): Guest Log: BIOS: Booting from Hard Disk...
2026-03-20 16:50:14 (3664278): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-20 16:50:14 (3664278): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-20 16:50:14 (3664278): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-20 16:50:19 (3664278): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-20 16:50:19 (3664278): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-20 16:50:24 (3664278): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.000160 main     Log opened 2026-03-20T15:50:21.906208000Z
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.000235 main     OS Product: Linux
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.000253 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.000267 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.000282 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.000282 main     Process ID: 1373
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.000283 main     Package type: LINUX_64BITS_GENERIC
2026-03-20 16:50:24 (3664278): Guest Log: 00:00:00.001136 main     5.2.32 r132073 started. Verbose level = 0
2026-03-20 16:50:24 (3664278): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-20 16:50:24 (3664278): Guest Log: [INFO] Mounting shared directory
2026-03-20 16:50:24 (3664278): Guest Log: [INFO] Checking for init_data.xml
2026-03-20 16:50:27 (3664278): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-20 16:50:27 (3664278): Guest Log: [INFO] Detected branch: prod
2026-03-20 16:50:28 (3664278): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-20 16:50:28 (3664278): Guest Log: Copying input files
2026-03-20 16:50:28 (3664278): Guest Log: Copied input files into RunAtlas.
2026-03-20 16:50:28 (3664278): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-20 16:50:28 (3664278): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-20 16:50:28 (3664278): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-20 16:50:28 (3664278): Guest Log: Further information can be found at the LHC@home message board.
2026-03-20 16:50:39 (3664278): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-20 16:50:39 (3664278): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-20 16:50:39 (3664278): Guest Log: 2.6.3.0 1648 0 30152 157506 4 1 3117744 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-20 16:50:40 (3664278): Guest Log: copied the webapp to /var/www
2026-03-20 16:50:40 (3664278): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-20 16:50:40 (3664278): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-20 16:50:40 (3664278): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-20 16:50:40 (3664278): Guest Log:  *** Starting ATLAS job. (PandaID=7057025981 taskID=49176446) ***
2026-03-20 18:29:10 (3664278): Status Report: Elapsed Time: '6000.000000'
2026-03-20 18:29:10 (3664278): Status Report: CPU Time: '44384.040000'
2026-03-20 19:53:12 (3664278): Guest Log:  *** Job finished ***
2026-03-20 19:53:12 (3664278): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:35,616 | INFO     | all workflow threads have been joined
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:35,616 | INFO     | end of generic workflow (traces error code: 0)
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:35,616 | INFO     | traces error code: 0
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:35,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,118 | INFO     | PID=6090 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,119 | INFO     | found 0 job(s) in 20 queues
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,120 | INFO     | [monitor] control thread has ended
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,227 [wrapper] ==== pilot stdout END ====
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,232 [wrapper] ==== wrapper stdout RESUME ====
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,238 [wrapper] pilotpid: 6090
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,248 [wrapper] Pilot exit status: 0
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,318 [wrapper] pandaids: 7057025981
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,342 [wrapper] cleanup supervisor_pilot 27552 6091
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,347 [wrapper] Test setup, not cleaning
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,351 [wrapper] apfmon messages muted
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,355 [wrapper] ==== wrapper stdout END ====
2026-03-20 19:53:12 (3664278): Guest Log: 2026-03-20 18:52:48,359 [wrapper] ==== wrapper stderr END ====
2026-03-20 19:53:12 (3664278): Guest Log:  *** Error codes and diagnostics ***
2026-03-20 19:53:12 (3664278): Guest Log:     "exeErrorCode": 0,
2026-03-20 19:53:12 (3664278): Guest Log:     "exeErrorDiag": "",
2026-03-20 19:53:12 (3664278): Guest Log:     "pilotErrorCode": 0,
2026-03-20 19:53:12 (3664278): Guest Log:     "pilotErrorDiag": "",
2026-03-20 19:53:12 (3664278): Guest Log:  *** Listing of results directory ***
2026-03-20 19:53:12 (3664278): Guest Log: total 189304
2026-03-20 19:53:12 (3664278): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 17 00:34 runpilot2-wrapper.sh
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 17 00:35 queuedata.json
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 17 00:35 pilot3.tar.gz
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas      6580 Mar 20 15:50 init_data.xml
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas    597528 Mar 20 15:50 input.tar.gz
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar 20 15:50 start_atlas.sh
2026-03-20 19:53:12 (3664278): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 20 15:50 EVNT.49134019._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas      2599 Mar 20 15:50 pandaJob.out
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas   1010663 Mar 20 15:51 agis_schedconf.cvmfs.json
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas       438 Mar 20 15:51 workernode_map.json
2026-03-20 19:53:12 (3664278): Guest Log: drwx------. 5 atlas atlas      4096 Mar 20 15:51 pilot3
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas 186129359 Mar 20 18:51 HITS.49176446._000007.pool.root.1
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas      1032 Mar 20 18:52 memory_monitor_summary.json
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 20 18:52 agis_ddmendpoints.agis.ALL.json
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas    405673 Mar 20 18:52 log.49176446._000007.job.log.tgz.1
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas      6378 Mar 20 18:52 heartbeat.json
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas       744 Mar 20 18:52 pilotlog.txt
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas        95 Mar 20 18:52 pilot_heartbeat.json
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas   1521455 Mar 20 18:52 log.49176446._000007.job.log.1
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas       357 Mar 20 18:52 output.list
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 20 18:52 runtime_log
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas   1945600 Mar 20 18:52 result.tar.gz
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 atlas atlas      8827 Mar 20 18:52 runtime_log.err
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas       681 Mar 20 18:52 k9cNDmfZXM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZLzLDmHcvgTo.diag
2026-03-20 19:53:12 (3664278): Guest Log: Looking for outputfile HITS.49176446._000007.pool.root.1
2026-03-20 19:53:12 (3664278): Guest Log: HITS file was successfully produced
2026-03-20 19:53:12 (3664278): Guest Log: -rw-------. 1 atlas atlas 186129359 Mar 20 18:51 /home/atlas/RunAtlas/HITS.49176446._000007.pool.root.1
2026-03-20 19:53:12 (3664278): Guest Log: Successfully finished the ATLAS job!
2026-03-20 19:53:12 (3664278): Guest Log: Copying the results back to the shared directory!
2026-03-20 19:53:12 (3664278): Guest Log:  *** Contents of shared directory: ***
2026-03-20 19:53:12 (3664278): Guest Log: total 215660
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 root root 218260166 Mar 20 15:50 ATLAS.root_0
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 root root      6580 Mar 20 15:50 init_data.xml
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 root root    597528 Mar 20 15:50 input.tar.gz
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 root root   1945600 Mar 20  2026 result.tar.gz
2026-03-20 19:53:12 (3664278): Guest Log: -rw-r--r--. 1 root root     15845 Mar 20 15:50 start_atlas.sh
2026-03-20 19:53:12 (3664278): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-20 19:53:13 (3664278): VM Completion File Detected.
2026-03-20 19:53:13 (3664278): Powering off VM.
2026-03-20 19:53:13 (3664278): Successfully stopped VM.
2026-03-20 19:53:13 (3664278): Deregistering VM. (boinc_e631be764dc6905a, slot#1)
2026-03-20 19:53:13 (3664278): Removing network bandwidth throttle group from VM.
2026-03-20 19:53:14 (3664278): Removing VM from VirtualBox.
2026-03-20 19:53:19 (3664278): called boinc_finish(0)

</stderr_txt>
]]>

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