Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:19:39 (15609): wrapper (7.7.26015): starting
02:19:39 (15609): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 02:19:39] Arguments: --nthreads 8
[2026-03-18 02:19:39] Threads: 8
[2026-03-18 02:19:39] Checking for CVMFS
[2026-03-18 02:19:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 02:19:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 02:19:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 02:19:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 02:19:46] 2.11.2.0 3545 132664 137812 157395 2 53 19597276 25165825 4502 130560 155 45928889 99.826 35752760 1162 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 02:19:46] CVMFS is ok
[2026-03-18 02:19:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 02:19:46] Checking for apptainer binary...
[2026-03-18 02:19:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 02:19:46] Running /usr/bin/apptainer --version
[2026-03-18 02:19:46] apptainer version 1.3.2-1.el7
[2026-03-18 02:19:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 02:19:55] cg-vwn466.simple-grid.lan
[2026-03-18 02:19:55] apptainer works
[2026-03-18 02:19:55] Set ATHENA_PROC_NUMBER=8
[2026-03-18 02:19:55] Set ATHENA_CORE_NUMBER=8
[2026-03-18 02:19:55] Starting ATLAS job with PandaID=7056986184
[2026-03-18 02:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 12:22:53]  *** The last 200 lines of the pilot log: ***
[2026-03-18 12:22:54] 2026-03-18 11:22:04,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 12:22:54] 2026-03-18 11:22:04,378 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 12:22:54] 2026-03-18 11:22:04,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 12:22:54] 2026-03-18 11:22:04,389 | INFO     | fitting pss+swap vs Time
[2026-03-18 12:22:54] 2026-03-18 11:22:04,390 | INFO     | sum of square deviations: 61761195210.0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,400 | INFO     | sum of deviations: 257449371347.50003
[2026-03-18 12:22:54] 2026-03-18 11:22:04,401 | INFO     | mean x: 1773815131.5
[2026-03-18 12:22:54] 2026-03-18 11:22:04,401 | INFO     | mean y: 2500833.220890411
[2026-03-18 12:22:54] 2026-03-18 11:22:04,401 | INFO     | intersect: -7391585193.427396
[2026-03-18 12:22:54] 2026-03-18 11:22:04,402 | INFO     | chi2: 4.907755594377279
[2026-03-18 12:22:54] 2026-03-18 11:22:04,403 | INFO     | sum of square deviations: 60188402930.0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,414 | INFO     | sum of deviations: 293648962681.0007
[2026-03-18 12:22:54] 2026-03-18 11:22:04,415 | INFO     | mean x: 1773814979.0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,415 | INFO     | mean y: 2504316.785837651
[2026-03-18 12:22:54] 2026-03-18 11:22:04,415 | INFO     | intersect: -8651636733.89399
[2026-03-18 12:22:54] 2026-03-18 11:22:04,416 | INFO     | chi2: 4.150230288960525
[2026-03-18 12:22:54] 2026-03-18 11:22:04,416 | INFO     | current chi2=4.150230288960525 (change=15.435269561602366 %)
[2026-03-18 12:22:54] 2026-03-18 11:22:04,416 | INFO     | right removable region: 578
[2026-03-18 12:22:54] 2026-03-18 11:22:04,417 | INFO     | sum of square deviations: 60188402930.0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,427 | INFO     | sum of deviations: 66657715900.99999
[2026-03-18 12:22:54] 2026-03-18 11:22:04,427 | INFO     | mean x: 1773815284.0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,427 | INFO     | mean y: 2519318.5526770293
[2026-03-18 12:22:54] 2026-03-18 11:22:04,428 | INFO     | intersect: -1961953395.5553334
[2026-03-18 12:22:54] 2026-03-18 11:22:04,428 | INFO     | chi2: 1.0564145057803802
[2026-03-18 12:22:54] 2026-03-18 11:22:04,429 | INFO     | current chi2=1.0564145057803802 (change=78.47459015704258 %)
[2026-03-18 12:22:54] 2026-03-18 11:22:04,429 | INFO     | sum of square deviations: 58642541387.5
[2026-03-18 12:22:54] 2026-03-18 11:22:04,439 | INFO     | sum of deviations: 29949345863.000008
[2026-03-18 12:22:54] 2026-03-18 11:22:04,440 | INFO     | mean x: 1773815436.5
[2026-03-18 12:22:54] 2026-03-18 11:22:04,440 | INFO     | mean y: 2522925.714285714
[2026-03-18 12:22:54] 2026-03-18 11:22:04,440 | INFO     | intersect: -903382765.750011
[2026-03-18 12:22:54] 2026-03-18 11:22:04,441 | INFO     | chi2: 0.8220422048896711
[2026-03-18 12:22:54] 2026-03-18 11:22:04,441 | INFO     | current chi2=0.8220422048896711 (change=22.18563827061205 %)
[2026-03-18 12:22:54] 2026-03-18 11:22:04,441 | INFO     | left removable region: 20
[2026-03-18 12:22:54] 2026-03-18 11:22:04,442 | INFO     | sum of square deviations: 53874050119.5
[2026-03-18 12:22:54] 2026-03-18 11:22:04,462 | INFO     | sum of deviations: 68676654586.5
[2026-03-18 12:22:54] 2026-03-18 11:22:04,463 | INFO     | mean x: 1773815558.5
[2026-03-18 12:22:54] 2026-03-18 11:22:04,463 | INFO     | mean y: 2526473.754480287
[2026-03-18 12:22:54] 2026-03-18 11:22:04,463 | INFO     | intersect: -2258668259.907669
[2026-03-18 12:22:54] 2026-03-18 11:22:04,464 | INFO     | chi2: 0.011019056246620166
[2026-03-18 12:22:54] 2026-03-18 11:22:04,464 | INFO     | current memory leak: 1.27 B/s (using 558 data points, chi2=0.01)
[2026-03-18 12:22:54] 2026-03-18 11:22:04,465 | INFO     | could have reported an average CPU frequency of 2250 MHz (23 samples)
[2026-03-18 12:22:54] 2026-03-18 11:22:04,465 | INFO     | ..............................
[2026-03-18 12:22:54] 2026-03-18 11:22:04,465 | INFO     | . Timing measurements:
[2026-03-18 12:22:54] 2026-03-18 11:22:04,465 | INFO     | . get job = 0 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,465 | INFO     | . initial setup = 94 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,465 | INFO     | . payload setup = 147 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,466 | INFO     | . stage-in = 0 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,466 | INFO     | . payload execution = 35673 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,466 | INFO     | . stage-out = 2 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,466 | INFO     | . log creation = 0 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,466 | INFO     | ..............................
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | 
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | job summary report
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | --------------------------------------------------
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | PanDA job id: 7056986184
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | task id: 49182650
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | errors: (none)
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 12:22:54] 2026-03-18 11:22:04,589 | INFO     | pilot state: finished 
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | transexitcode: 0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | exeerrorcode: 0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | exeerrordiag: 
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | exitcode: 0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | exitmsg: OK
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | cpuconsumptiontime: 139934 s
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | nevents: 400
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | neventsw: 0
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | pid: 24229
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | pgrp: 24229
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | corecount: 8
[2026-03-18 12:22:54] 2026-03-18 11:22:04,590 | INFO     | event service: False
[2026-03-18 12:22:54] 2026-03-18 11:22:04,591 | INFO     | sizes: {0: 2279834, 1: 2279918, 2: 2280379, 12: 2280379, 35825: 2320723, 35828: 2329905, 35830: 2330043}
[2026-03-18 12:22:54] 2026-03-18 11:22:04,591 | INFO     | --------------------------------------------------
[2026-03-18 12:22:54] 2026-03-18 11:22:04,591 | INFO     | 
[2026-03-18 12:22:54] 2026-03-18 11:22:04,591 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-18 12:22:54] 2026-03-18 11:22:05,016 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,016 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,016 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,016 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 12:22:54] 2026-03-18 11:22:05,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 12:22:54] 2026-03-18 11:22:05,018 | INFO     | job 7056986184 has completed (purged errors)
[2026-03-18 12:22:54] 2026-03-18 11:22:05,018 | INFO     | overall cleanup function is called
[2026-03-18 12:22:54] 2026-03-18 11:22:05,422 | WARNING  | process 24229 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 12:22:54] 2026-03-18 11:22:05,500 | INFO     | using path: /var/lib/boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 12:22:54] 2026-03-18 11:22:05,501 | INFO     | reaping zombies for max 20 seconds
[2026-03-18 12:22:54] 2026-03-18 11:22:05,530 | INFO     | checking for looping job (in state=finished)
[2026-03-18 12:22:54] 2026-03-18 11:22:05,530 | INFO     | using looping job limit: 7200 s
[2026-03-18 12:22:54] 2026-03-18 11:22:05,530 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/5/PanDA_Pilot-7056986184/payload.stdout) since it has not been created yet
[2026-03-18 12:22:54] 2026-03-18 11:22:05,531 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-18 12:22:54] 2026-03-18 11:22:05,565 | INFO     | sufficient remaining disk space (495691235328 B)
[2026-03-18 12:22:54] 2026-03-18 11:22:05,565 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-18 12:22:54] 2026-03-18 11:22:05,565 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/5/PanDA_Pilot-7056986184/HITS.49182650._000239.pool.root.1 since it does not exist
[2026-03-18 12:22:54] 2026-03-18 11:22:05,658 | INFO     | number of running child processes to parent process 24229: 1
[2026-03-18 12:22:54] 2026-03-18 11:22:05,658 | INFO     | maximum number of monitored processes: 9
[2026-03-18 12:22:54] 2026-03-18 11:22:05,658 | INFO     | aborting job monitoring since job object (job id=7056986184) has expired
[2026-03-18 12:22:54] 2026-03-18 11:22:06,026 | INFO     | --- collectZombieJob: --- 10, [24229]
[2026-03-18 12:22:54] 2026-03-18 11:22:06,027 | INFO     | zombie collector waiting for pid 24229
[2026-03-18 12:22:54] 2026-03-18 11:22:06,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 12:22:54] 2026-03-18 11:22:06,027 | INFO     | collected zombie processes
[2026-03-18 12:22:54] 2026-03-18 11:22:06,027 | INFO     | will attempt to kill all subprocesses of pid=24229
[2026-03-18 12:22:54] 2026-03-18 11:22:06,144 | INFO     | process IDs to be killed: [24229] (in reverse order)
[2026-03-18 12:22:54] 2026-03-18 11:22:06,208 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 12:22:54] 2026-03-18 11:22:06,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 12:22:54] 2026-03-18 11:22:06,212 | INFO     | did not find any defunct processes belonging to 24229
[2026-03-18 12:22:54] 2026-03-18 11:22:06,215 | INFO     | did not find any defunct processes belonging to 24229
[2026-03-18 12:22:54] 2026-03-18 11:22:06,216 | INFO     | ready for new job
[2026-03-18 12:22:54] 2026-03-18 11:22:06,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 12:22:54] 2026-03-18 11:22:06,221 | INFO     | **************************************
[2026-03-18 12:22:54] 2026-03-18 11:22:06,221 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 12:22:54] 2026-03-18 11:22:06,221 | INFO     | **************************************
[2026-03-18 12:22:54] 2026-03-18 11:22:06,221 | INFO     | 
[2026-03-18 12:22:54] 2026-03-18 11:22:06,222 | INFO     | pilot is running in a VM
[2026-03-18 12:22:54] 2026-03-18 11:22:06,222 | INFO     | architecture information:
[2026-03-18 12:22:54] 2026-03-18 11:22:06,223 | INFO     | executing command: cat /etc/os-release
[2026-03-18 12:22:54] 2026-03-18 11:22:06,243 | INFO     | cat /etc/os-release:
[2026-03-18 12:22:54] NAME="CentOS Linux"
[2026-03-18 12:22:54] VERSION="7 (Core)"
[2026-03-18 12:22:54] ID="centos"
[2026-03-18 12:22:54] ID_LIKE="rhel fedora"
[2026-03-18 12:22:54] VERSION_ID="7"
[2026-03-18 12:22:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 12:22:54] ANSI_COLOR="0;31"
[2026-03-18 12:22:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 12:22:54] HOME_URL="https://www.centos.org/"
[2026-03-18 12:22:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 12:22:54] 
[2026-03-18 12:22:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 12:22:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 12:22:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 12:22:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 12:22:54] 
[2026-03-18 12:22:54] 2026-03-18 11:22:06,243 | INFO     | **************************************
[2026-03-18 12:22:54] 2026-03-18 11:22:06,746 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-18 12:22:54] 2026-03-18 11:22:06,816 | INFO     | sufficient remaining disk space (495697526784 B)
[2026-03-18 12:22:54] 2026-03-18 11:22:06,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 12:22:54] 2026-03-18 11:22:06,817 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 12:22:54] 2026-03-18 11:22:06,817 | INFO     | update_server=False
[2026-03-18 12:22:54] 2026-03-18 11:22:06,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 12:22:54] 2026-03-18 11:22:06,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 12:22:54] 2026-03-18 11:22:06,818 | INFO     | aborting loop
[2026-03-18 12:22:54] 2026-03-18 11:22:07,485 | INFO     | all data control threads have been joined
[2026-03-18 12:22:54] 2026-03-18 11:22:07,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 12:22:54] 2026-03-18 11:22:07,822 | INFO     | [job] retrieve thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:07,823 | INFO     | [job] job monitor thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,012 | INFO     | all job control threads have been joined
[2026-03-18 12:22:54] 2026-03-18 11:22:08,019 | INFO     | [data] copytool_in thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,077 | INFO     | all payload control threads have been joined
[2026-03-18 12:22:54] 2026-03-18 11:22:08,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 12:22:54] 2026-03-18 11:22:08,290 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,474 | INFO     | [payload] validate_post thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,489 | INFO     | [data] control thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,568 | INFO     | [payload] failed_post thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,609 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,712 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:08,780 | INFO     | [job] validate thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:09,017 | INFO     | [job] control thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:09,056 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:09,083 | INFO     | [payload] control thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:09,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 12:22:54] 2026-03-18 11:22:09,615 | INFO     | [data] copytool_out thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:10,607 | INFO     | [job] queue monitor thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:12,231 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 12:22:54] 2026-03-18 11:22:36,289 | INFO     | PID=19715 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 12:22:54] 2026-03-18 11:22:36,289 | INFO     | .. there are 9 such processes running
[2026-03-18 12:22:54] 2026-03-18 11:22:36,290 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 12:22:54] 2026-03-18 11:22:36,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 12:22:54] 2026-03-18 11:22:36,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 12:22:54] 2026-03-18 11:22:43,882 | INFO     | [monitor] cgroup control has ended
[2026-03-18 12:22:54] 2026-03-18 11:22:44,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094999435072)>', '<ExcThread(monitor, started 140094568650496)>']
[2026-03-18 12:22:54] 2026-03-18 11:22:45,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 12:22:54] 2026-03-18 11:22:45,345 | INFO     | [monitor] control thread has ended
[2026-03-18 12:22:54] 2026-03-18 11:22:49,386 | INFO     | all workflow threads have been joined
[2026-03-18 12:22:54] 2026-03-18 11:22:49,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 12:22:54] 2026-03-18 11:22:49,387 | INFO     | traces error code: 0
[2026-03-18 12:22:54] 2026-03-18 11:22:49,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 12:22:54] 2026-03-18 11:22:49,627 [wrapper] ==== pilot stdout END ====
[2026-03-18 12:22:54] 2026-03-18 11:22:49,695 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 12:22:54] 2026-03-18 11:22:49,787 [wrapper] pilotpid: 19715
[2026-03-18 12:22:54] 2026-03-18 11:22:49,882 [wrapper] Pilot exit status: 0
[2026-03-18 12:22:54] 2026-03-18 11:22:50,315 [wrapper] pandaids: 7056986184
[2026-03-18 12:22:54] 2026-03-18 11:22:50,815 [wrapper] cleanup supervisor_pilot 19240 19716
[2026-03-18 12:22:54] 2026-03-18 11:22:50,912 [wrapper] Test setup, not cleaning
[2026-03-18 12:22:54] 2026-03-18 11:22:50,979 [wrapper] apfmon messages muted
[2026-03-18 12:22:54] 2026-03-18 11:22:51,071 [wrapper] ==== wrapper stdout END ====
[2026-03-18 12:22:54] 2026-03-18 11:22:51,177 [wrapper] ==== wrapper stderr END ====
[2026-03-18 12:22:54]  *** Error codes and diagnostics ***
[2026-03-18 12:22:54]     "exeErrorCode": 0,
[2026-03-18 12:22:54]     "exeErrorDiag": "",
[2026-03-18 12:22:54]     "pilotErrorCode": 0,
[2026-03-18 12:22:54]     "pilotErrorDiag": "",
[2026-03-18 12:22:54]  *** Listing of results directory ***
[2026-03-18 12:22:54] total 497556
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-18 12:22:54] -rwx------. 1 boinc boinc     36322 Mar 16 22:29 runpilot2-wrapper.sh
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc      5111 Mar 16 22:30 queuedata.json
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc       100 Mar 18 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 12:22:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 02:19 run_atlas
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc       105 Mar 18 02:19 job.xml
[2026-03-18 12:22:54] -rw-r--r--. 2 boinc boinc 242828997 Mar 18 02:19 EVNT.49137741._000010.pool.root.1
[2026-03-18 12:22:54] -rw-r--r--. 2 boinc boinc     15845 Mar 18 02:19 start_atlas.sh
[2026-03-18 12:22:54] drwxrwx--x. 2 boinc boinc        68 Mar 18 02:19 shared
[2026-03-18 12:22:54] -rw-r--r--. 2 boinc boinc    597554 Mar 18 02:19 input.tar.gz
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc      6392 Mar 18 02:19 init_data.xml
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc         0 Mar 18 02:19 boinc_lockfile
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc      2632 Mar 18 02:19 pandaJob.out
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc       413 Mar 18 02:24 workernode_map.json
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc   1011515 Mar 18 02:24 agis_schedconf.cvmfs.json
[2026-03-18 12:22:54] drwx------. 5 boinc boinc      4096 Mar 18 02:24 pilot3
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc       532 Mar 18 12:21 boinc_task_state.xml
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc 251310723 Mar 18 12:21 HITS.49182650._000239.pool.root.1
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc      1016 Mar 18 12:21 memory_monitor_summary.json
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc   1511579 Mar 18 12:22 agis_ddmendpoints.agis.ALL.json
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc    760720 Mar 18 12:22 log.49182650._000239.job.log.tgz.1
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc      6312 Mar 18 12:22 heartbeat.json
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc        95 Mar 18 12:22 pilot_heartbeat.json
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc      8192 Mar 18 12:22 boinc_mmap_file
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc        29 Mar 18 12:22 wrapper_checkpoint.txt
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc      4880 Mar 18 12:22 pilotlog.txt
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc   4954755 Mar 18 12:22 log.49182650._000239.job.log.1
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc       357 Mar 18 12:22 output.list
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc       620 Mar 18 12:22 runtime_log
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc   5734400 Mar 18 12:22 result.tar.gz
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc      8816 Mar 18 12:22 runtime_log.err
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc       658 Mar 18 12:22 e6pMDmHgUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmh9vLDmpSNcZm.diag
[2026-03-18 12:22:54] -rw-r--r--. 1 boinc boinc     21025 Mar 18 12:22 stderr.txt
[2026-03-18 12:22:54] HITS file was successfully produced:
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc 251310723 Mar 18 12:21 shared/HITS.pool.root.1
[2026-03-18 12:22:54]  *** Contents of shared directory: ***
[2026-03-18 12:22:54] total 488764
[2026-03-18 12:22:54] -rw-r--r--. 2 boinc boinc 242828997 Mar 18 02:19 ATLAS.root_0
[2026-03-18 12:22:54] -rw-r--r--. 2 boinc boinc     15845 Mar 18 02:19 start_atlas.sh
[2026-03-18 12:22:54] -rw-r--r--. 2 boinc boinc    597554 Mar 18 02:19 input.tar.gz
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc 251310723 Mar 18 12:21 HITS.pool.root.1
[2026-03-18 12:22:54] -rw-------. 1 boinc boinc   5734400 Mar 18 12:22 result.tar.gz
12:22:55 (15609): run_atlas exited; CPU time 140472.582632
12:22:55 (15609): called boinc_finish(0)

</stderr_txt>
]]>

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