Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:48:07 (3868653): wrapper (7.7.26015): starting
23:48:07 (3868653): wrapper: running run_atlas (--nthreads 3)
[2026-03-17 23:48:07] Arguments: --nthreads 3
[2026-03-17 23:48:07] Threads: 3
[2026-03-17 23:48:07] Checking for CVMFS
[2026-03-17 23:48:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 23:48:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 23:48:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 23:48:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 23:48:07] 2.9.2.0 3677611 2003 72396 157390 0 50 23831306 36864000 0 130560 0 489144 99.974 58767 5103 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-17 23:48:07] CVMFS is ok
[2026-03-17 23:48:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 23:48:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 23:48:07] Further information can be found at the LHC@home message board.
[2026-03-17 23:48:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 23:48:07] Checking for apptainer binary...
[2026-03-17 23:48:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 23:48:07] Running /usr/bin/apptainer --version
[2026-03-17 23:48:07] apptainer version 1.4.1-1.1
[2026-03-17 23:48:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 23:48:07] belleA263b
[2026-03-17 23:48:07] apptainer works
[2026-03-17 23:48:08] Set ATHENA_PROC_NUMBER=3
[2026-03-17 23:48:08] Set ATHENA_CORE_NUMBER=3
[2026-03-17 23:48:08] Starting ATLAS job with PandaID=7056984540
[2026-03-17 23:48:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 02:58:42]  *** The last 200 lines of the pilot log: ***
[2026-03-18 02:58:42] 2026-03-18 01:58:22,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | job 7056984540 has completed (purged errors)
[2026-03-18 02:58:42] 2026-03-18 01:58:22,154 | INFO     | overall cleanup function is called
[2026-03-18 02:58:42] 2026-03-18 01:58:23,161 | INFO     | --- collectZombieJob: --- 10, [3877140]
[2026-03-18 02:58:42] 2026-03-18 01:58:23,161 | INFO     | zombie collector waiting for pid 3877140
[2026-03-18 02:58:42] 2026-03-18 01:58:23,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 02:58:42] 2026-03-18 01:58:23,161 | INFO     | collected zombie processes
[2026-03-18 02:58:42] 2026-03-18 01:58:23,161 | INFO     | will attempt to kill all subprocesses of pid=3877140
[2026-03-18 02:58:42] 2026-03-18 01:58:23,202 | INFO     | process IDs to be killed: [3877140] (in reverse order)
[2026-03-18 02:58:42] 2026-03-18 01:58:23,227 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 02:58:42] 2026-03-18 01:58:23,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 02:58:42] 2026-03-18 01:58:23,228 | INFO     | did not find any defunct processes belonging to 3877140
[2026-03-18 02:58:42] 2026-03-18 01:58:23,229 | INFO     | did not find any defunct processes belonging to 3877140
[2026-03-18 02:58:42] 2026-03-18 01:58:23,229 | INFO     | ready for new job
[2026-03-18 02:58:42] 2026-03-18 01:58:23,229 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 02:58:42] 2026-03-18 01:58:23,230 | INFO     | **************************************
[2026-03-18 02:58:42] 2026-03-18 01:58:23,230 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 02:58:42] 2026-03-18 01:58:23,230 | INFO     | **************************************
[2026-03-18 02:58:42] 2026-03-18 01:58:23,230 | INFO     | 
[2026-03-18 02:58:42] 2026-03-18 01:58:23,230 | INFO     | architecture information:
[2026-03-18 02:58:42] 2026-03-18 01:58:23,231 | INFO     | executing command: cat /etc/os-release
[2026-03-18 02:58:42] 2026-03-18 01:58:23,240 | INFO     | cat /etc/os-release:
[2026-03-18 02:58:42] NAME="CentOS Linux"
[2026-03-18 02:58:42] VERSION="7 (Core)"
[2026-03-18 02:58:42] ID="centos"
[2026-03-18 02:58:42] ID_LIKE="rhel fedora"
[2026-03-18 02:58:42] VERSION_ID="7"
[2026-03-18 02:58:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 02:58:42] ANSI_COLOR="0;31"
[2026-03-18 02:58:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 02:58:42] HOME_URL="https://www.centos.org/"
[2026-03-18 02:58:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 02:58:42] 
[2026-03-18 02:58:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 02:58:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 02:58:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 02:58:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 02:58:42] 
[2026-03-18 02:58:42] 2026-03-18 01:58:23,240 | INFO     | **************************************
[2026-03-18 02:58:42] 2026-03-18 01:58:23,743 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-18 02:58:42] 2026-03-18 01:58:23,756 | INFO     | sufficient remaining disk space (380509356032 B)
[2026-03-18 02:58:42] 2026-03-18 01:58:23,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 02:58:42] 2026-03-18 01:58:23,756 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 02:58:42] 2026-03-18 01:58:23,756 | INFO     | update_server=False
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 02:58:42] 2026-03-18 01:58:23,757 | INFO     | aborting loop
[2026-03-18 02:58:42] 2026-03-18 01:58:24,279 | INFO     | all payload control threads have been joined
[2026-03-18 02:58:42] 2026-03-18 01:58:24,589 | INFO     | all data control threads have been joined
[2026-03-18 02:58:42] 2026-03-18 01:58:24,714 | INFO     | all job control threads have been joined
[2026-03-18 02:58:42] 2026-03-18 01:58:24,762 | INFO     | [job] retrieve thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:24,763 | INFO     | [job] queue monitor thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:24,763 | INFO     | [job] job monitor thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:24,954 | INFO     | [payload] failed_post thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:24,955 | INFO     | [data] copytool_in thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,285 | INFO     | [payload] control thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,350 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,595 | INFO     | [data] control thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,720 | INFO     | [job] control thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,763 | INFO     | [data] copytool_out thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,786 | INFO     | [payload] validate_post thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,957 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,961 | INFO     | [job] validate thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:25,964 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:26,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 02:58:42] 2026-03-18 01:58:30,639 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:33,883 | INFO     | [monitor] cgroup control has ended
[2026-03-18 02:58:42] 2026-03-18 01:58:34,754 | INFO     | job.realtimelogging is not enabled
[2026-03-18 02:58:42] 2026-03-18 01:58:35,759 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 02:58:42] 2026-03-18 01:58:37,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275110340416)>', '<ExcThread(monitor, started 140274596554496)>']
[2026-03-18 02:58:42] 2026-03-18 01:58:37,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 02:58:42] 2026-03-18 01:58:37,831 | INFO     | [monitor] control thread has ended
[2026-03-18 02:58:42] 2026-03-18 01:58:42,769 | INFO     | all workflow threads have been joined
[2026-03-18 02:58:42] 2026-03-18 01:58:42,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 02:58:42] 2026-03-18 01:58:42,770 | INFO     | traces error code: 0
[2026-03-18 02:58:42] 2026-03-18 01:58:42,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 02:58:42] 2026-03-18 01:58:42,820 [wrapper] ==== pilot stdout END ====
[2026-03-18 02:58:42] 2026-03-18 01:58:42,823 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 02:58:42] 2026-03-18 01:58:42,826 [wrapper] pilotpid: 3872703
[2026-03-18 02:58:42] 2026-03-18 01:58:42,828 [wrapper] Pilot exit status: 0
[2026-03-18 02:58:42] 2026-03-18 01:58:42,836 [wrapper] pandaids: 7056984540
[2026-03-18 02:58:42] 2026-03-18 01:58:42,853 [wrapper] cleanup supervisor_pilot 3883982 3872704
[2026-03-18 02:58:42] 2026-03-18 01:58:42,855 [wrapper] Test setup, not cleaning
[2026-03-18 02:58:42] 2026-03-18 01:58:42,858 [wrapper] apfmon messages muted
[2026-03-18 02:58:42] 2026-03-18 01:58:42,860 [wrapper] ==== wrapper stdout END ====
[2026-03-18 02:58:42] 2026-03-18 01:58:42,863 [wrapper] ==== wrapper stderr END ====
[2026-03-18 02:58:42]  *** Error codes and diagnostics ***
[2026-03-18 02:58:42]     "exeErrorCode": 0,
[2026-03-18 02:58:42]     "exeErrorDiag": "",
[2026-03-18 02:58:42]     "pilotErrorCode": 0,
[2026-03-18 02:58:42]     "pilotErrorDiag": "",
[2026-03-18 02:58:42]  *** Listing of results directory ***
[2026-03-18 02:58:42] total 468180
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-18 02:58:42] -rwx------ 1 boinc boinc     36322 Mar 16 22:28 runpilot2-wrapper.sh
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc      5111 Mar 16 22:30 queuedata.json
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc       100 Mar 17 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 02:58:42] -rwxr-xr-x 1 boinc boinc      7986 Mar 17 23:48 run_atlas
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc       105 Mar 17 23:48 job.xml
[2026-03-18 02:58:42] -rw-r--r-- 2 boinc boinc 239220804 Mar 17 23:48 EVNT.49137490._000005.pool.root.1
[2026-03-18 02:58:42] -rw-r--r-- 2 boinc boinc    597550 Mar 17 23:48 input.tar.gz
[2026-03-18 02:58:42] -rw-r--r-- 2 boinc boinc     15845 Mar 17 23:48 start_atlas.sh
[2026-03-18 02:58:42] drwxrwx--x 2 boinc boinc      4096 Mar 17 23:48 shared
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc         0 Mar 17 23:48 boinc_setup_complete
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc      6448 Mar 17 23:48 init_data.xml
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc         0 Mar 17 23:48 boinc_lockfile
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc      2634 Mar 17 23:48 pandaJob.out
[2026-03-18 02:58:42] -rw------- 1 boinc boinc   1011333 Mar 17 23:48 agis_schedconf.cvmfs.json
[2026-03-18 02:58:42] -rw------- 1 boinc boinc       418 Mar 17 23:48 workernode_map.json
[2026-03-18 02:58:42] drwx------ 5 boinc boinc      4096 Mar 17 23:48 pilot3
[2026-03-18 02:58:42] -rw------- 1 boinc boinc 232302523 Mar 18 02:57 HITS.49182575._000123.pool.root.1
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc       530 Mar 18 02:58 boinc_task_state.xml
[2026-03-18 02:58:42] -rw------- 1 boinc boinc        95 Mar 18 02:58 pilot_heartbeat.json
[2026-03-18 02:58:42] -rw------- 1 boinc boinc      1017 Mar 18 02:58 memory_monitor_summary.json
[2026-03-18 02:58:42] -rw------- 1 boinc boinc   1511579 Mar 18 02:58 agis_ddmendpoints.agis.ALL.json
[2026-03-18 02:58:42] -rw------- 1 boinc boinc    356389 Mar 18 02:58 log.49182575._000123.job.log.tgz.1
[2026-03-18 02:58:42] -rw------- 1 boinc boinc      6292 Mar 18 02:58 heartbeat.json
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc      8192 Mar 18 02:58 boinc_mmap_file
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc        28 Mar 18 02:58 wrapper_checkpoint.txt
[2026-03-18 02:58:42] -rw------- 1 boinc boinc      4624 Mar 18 02:58 pilotlog.txt
[2026-03-18 02:58:42] -rw------- 1 boinc boinc   1620390 Mar 18 02:58 log.49182575._000123.job.log.1
[2026-03-18 02:58:42] -rw------- 1 boinc boinc       357 Mar 18 02:58 output.list
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc       620 Mar 18 02:58 runtime_log
[2026-03-18 02:58:42] -rw------- 1 boinc boinc   1996800 Mar 18 02:58 result.tar.gz
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc      8917 Mar 18 02:58 runtime_log.err
[2026-03-18 02:58:42] -rw------- 1 boinc boinc       664 Mar 18 02:58 TogMDm2eUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm65vLDm2Gv2In.diag
[2026-03-18 02:58:42] -rw-r--r-- 1 boinc boinc     12466 Mar 18 02:58 stderr.txt
[2026-03-18 02:58:42] HITS file was successfully produced:
[2026-03-18 02:58:42] -rw------- 1 boinc boinc 232302523 Mar 18 02:57 shared/HITS.pool.root.1
[2026-03-18 02:58:42]  *** Contents of shared directory: ***
[2026-03-18 02:58:42] total 463036
[2026-03-18 02:58:42] -rw-r--r-- 2 boinc boinc 239220804 Mar 17 23:48 ATLAS.root_0
[2026-03-18 02:58:42] -rw-r--r-- 2 boinc boinc    597550 Mar 17 23:48 input.tar.gz
[2026-03-18 02:58:42] -rw-r--r-- 2 boinc boinc     15845 Mar 17 23:48 start_atlas.sh
[2026-03-18 02:58:42] -rw------- 1 boinc boinc 232302523 Mar 18 02:57 HITS.pool.root.1
[2026-03-18 02:58:42] -rw------- 1 boinc boinc   1996800 Mar 18 02:58 result.tar.gz
02:58:44 (3868653): run_atlas exited; CPU time 33156.870777
02:58:44 (3868653): called boinc_finish(0)

</stderr_txt>
]]>

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