Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-20 13:24:43 (77120): vboxwrapper version 26210
2026-03-20 13:24:43 (77120): BOINC client version: 8.2.8
2026-03-20 13:24:44 (77120): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-20 13:24:44 (77120): Successfully copied 'init_data.xml' to the shared directory.
2026-03-20 13:24:44 (77120): Create VM. (boinc_cdae3b5a795028ec, slot#3)
2026-03-20 13:24:45 (77120): Setting Memory Size for VM. (4800MB)
2026-03-20 13:24:45 (77120): Setting CPU Count for VM. (8)
2026-03-20 13:24:45 (77120): Setting Chipset Options for VM.
2026-03-20 13:24:46 (77120): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-20 13:24:46 (77120): Setting Boot Options for VM.
2026-03-20 13:24:46 (77120): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-20 13:24:47 (77120): Enabling VM Network Access.
2026-03-20 13:24:47 (77120): Disabling USB Support for VM.
2026-03-20 13:24:47 (77120): Disabling COM Port Support for VM.
2026-03-20 13:24:47 (77120): Disabling LPT Port Support for VM.
2026-03-20 13:24:48 (77120): Disabling Audio Support for VM.
2026-03-20 13:24:48 (77120): Disabling Clipboard Support for VM.
2026-03-20 13:24:48 (77120): Disabling Drag and Drop Support for VM.
2026-03-20 13:24:48 (77120): Adding storage controller(s) to VM.
2026-03-20 13:24:49 (77120): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-20 13:24:51 (77120): Adding VirtualBox Guest Additions to VM.
2026-03-20 13:24:51 (77120): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-20 13:24:51 (77120): forwarding host port 59744 to guest port 80
2026-03-20 13:24:51 (77120): Enabling remote desktop for VM.
2026-03-20 13:24:52 (77120): Required extension pack not installed, remote desktop not enabled.
2026-03-20 13:24:52 (77120): Enabling shared directory for VM.
2026-03-20 13:24:52 (77120): Starting VM using VBoxManage interface. (boinc_cdae3b5a795028ec, slot#3)
2026-03-20 13:24:57 (77120): Successfully started VM. (PID = '32016')
2026-03-20 13:24:57 (77120): Reporting VM Process ID to BOINC.
2026-03-20 13:24:57 (77120): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-20 13:24:57 (77120): Guest Log: CPUID EDX: 0x178bfbff
2026-03-20 13:24:57 (77120): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-20 13:24:57 (77120): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-20 13:24:57 (77120): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-20 13:24:57 (77120): Detected: Web Application Enabled (http://localhost:59744)
2026-03-20 13:24:57 (77120): Preference change detected
2026-03-20 13:24:57 (77120): Setting CPU throttle for VM. (80%)
2026-03-20 13:24:57 (77120): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-20 13:24:59 (77120): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-20 13:24:59 (77120): Guest Log: BIOS: Booting from Hard Disk...
2026-03-20 13:25:02 (77120): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-20 13:25:02 (77120): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-20 13:25:02 (77120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-20 13:25:07 (77120): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-20 13:25:07 (77120): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-20 13:25:12 (77120): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000093 main     Log opened 2026-03-20T13:25:09.645165000Z
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000165 main     OS Product: Linux
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000183 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000324 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000352 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000352 main     Process ID: 1368
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000353 main     Package type: LINUX_64BITS_GENERIC
2026-03-20 13:25:12 (77120): Guest Log: 00:00:00.000945 main     5.2.32 r132073 started. Verbose level = 0
2026-03-20 13:25:12 (77120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-20 13:25:12 (77120): Guest Log: [INFO] Mounting shared directory
2026-03-20 13:25:12 (77120): Guest Log: [INFO] Checking for init_data.xml
2026-03-20 13:25:22 (77120): Guest Log: 00:00:10.003182 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 803 812 000ns (GuestNow=1 774 027 521 451 018 000 ns GuestLast=1 774 013 109 647 206 000 ns fSetTimeLastLoop=true )
2026-03-20 13:25:22 (77120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-20 13:25:22 (77120): Guest Log: [INFO] Detected branch: prod
2026-03-20 13:25:23 (77120): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-20 13:25:23 (77120): Guest Log: Copying input files
2026-03-20 13:25:24 (77120): Guest Log: Copied input files into RunAtlas.
2026-03-20 13:25:24 (77120): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-20 13:25:24 (77120): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-20 13:25:24 (77120): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-20 13:25:24 (77120): Guest Log: Further information can be found at the LHC@home message board.
2026-03-20 13:25:33 (77120): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-20 13:25:36 (77120): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-20 13:25:36 (77120): Guest Log: 2.6.3.0 1650 0 30156 157510 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-20 13:25:37 (77120): Guest Log: copied the webapp to /var/www
2026-03-20 13:25:37 (77120): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-20 13:25:37 (77120): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-20 13:25:38 (77120): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-20 13:25:38 (77120): Guest Log:  *** Starting ATLAS job. (PandaID=7056980362 taskID=49176327) ***
2026-03-20 15:05:14 (77120): Status Report: Elapsed Time: '6000.000000'
2026-03-20 15:05:14 (77120): Status Report: CPU Time: '37575.343750'
2026-03-20 15:49:51 (77120): Guest Log:  *** Job finished ***
2026-03-20 15:49:51 (77120): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:36,571 | INFO     | all workflow threads have been joined
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:36,572 | INFO     | end of generic workflow (traces error code: 0)
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:36,572 | INFO     | traces error code: 0
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:36,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,348 | INFO     | PID=6092 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,349 | INFO     | found 0 job(s) in 20 queues
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,349 | INFO     | [monitor] control thread has ended
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,487 [wrapper] ==== pilot stdout END ====
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,492 [wrapper] ==== wrapper stdout RESUME ====
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,497 [wrapper] pilotpid: 6092
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,501 [wrapper] Pilot exit status: 0
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,656 [wrapper] pandaids: 7056980362
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,682 [wrapper] cleanup supervisor_pilot 26685 6093
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,689 [wrapper] Test setup, not cleaning
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,696 [wrapper] apfmon messages muted
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,701 [wrapper] ==== wrapper stdout END ====
2026-03-20 15:49:51 (77120): Guest Log: 2026-03-20 19:49:46,705 [wrapper] ==== wrapper stderr END ====
2026-03-20 15:49:51 (77120): Guest Log:  *** Error codes and diagnostics ***
2026-03-20 15:49:51 (77120): Guest Log:     "exeErrorCode": 0,
2026-03-20 15:49:51 (77120): Guest Log:     "exeErrorDiag": "",
2026-03-20 15:49:51 (77120): Guest Log:     "pilotErrorCode": 0,
2026-03-20 15:49:51 (77120): Guest Log:     "pilotErrorDiag": "",
2026-03-20 15:49:51 (77120): Guest Log:  *** Listing of results directory ***
2026-03-20 15:49:51 (77120): Guest Log: total 244868
2026-03-20 15:49:51 (77120): Guest Log: -rw-r--r--. 1 atlas atlas    585013 Mar 16 19:40 pilot3.tar.gz
2026-03-20 15:49:51 (77120): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar 16 19:41 queuedata.json
2026-03-20 15:49:51 (77120): Guest Log: -rwx------. 1 atlas atlas     36322 Mar 16 19:41 runpilot2-wrapper.sh
2026-03-20 15:49:51 (77120): Guest Log: -rwxr-xr-x. 1 atlas atlas      9729 Mar 20 17:25 init_data.xml
2026-03-20 15:49:51 (77120): Guest Log: -rwxr-xr-x. 1 atlas atlas    597546 Mar 20 17:25 input.tar.gz
2026-03-20 15:49:51 (77120): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar 20 17:25 start_atlas.sh
2026-03-20 15:49:51 (77120): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 20 17:25 EVNT.49133508._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-03-20 15:49:51 (77120): Guest Log: -rw-r--r--. 1 atlas atlas      2643 Mar 20 17:25 pandaJob.out
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas   1010679 Mar 20 17:26 agis_schedconf.cvmfs.json
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas   1511579 Mar 20 17:26 agis_ddmendpoints.agis.ALL.json
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas       421 Mar 20 17:26 workernode_map.json
2026-03-20 15:49:51 (77120): Guest Log: drwx------. 5 atlas atlas      4096 Mar 20 17:27 pilot3
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas 243694005 Mar 20 19:48 HITS.49176327._000025.pool.root.1
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas        95 Mar 20 19:48 pilot_heartbeat.json
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas      1039 Mar 20 19:49 memory_monitor_summary.json
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas    393754 Mar 20 19:49 log.49176327._000025.job.log.tgz.1
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas      6343 Mar 20 19:49 heartbeat.json
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas       744 Mar 20 19:49 pilotlog.txt
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas   1200073 Mar 20 19:49 log.49176327._000025.job.log.1
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas       357 Mar 20 19:49 output.list
2026-03-20 15:49:51 (77120): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 20 19:49 runtime_log
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas   1607680 Mar 20 19:49 result.tar.gz
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas       652 Mar 20 19:49 zNMODmgzSM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbkvLDmlGxpUn.diag
2026-03-20 15:49:51 (77120): Guest Log: -rw-r--r--. 1 atlas atlas      8742 Mar 20 19:49 runtime_log.err
2026-03-20 15:49:51 (77120): Guest Log: Looking for outputfile HITS.49176327._000025.pool.root.1
2026-03-20 15:49:51 (77120): Guest Log: HITS file was successfully produced
2026-03-20 15:49:51 (77120): Guest Log: -rw-------. 1 atlas atlas 243694005 Mar 20 19:48 /home/atlas/RunAtlas/HITS.49176327._000025.pool.root.1
2026-03-20 15:49:52 (77120): Guest Log: Successfully finished the ATLAS job!
2026-03-20 15:49:52 (77120): Guest Log: Copying the results back to the shared directory!
2026-03-20 15:49:52 (77120): Guest Log:  *** Contents of shared directory: ***
2026-03-20 15:49:52 (77120): Guest Log: total 472980
2026-03-20 15:49:52 (77120): Guest Log: -rwxrwxrwx. 1 root root 238399117 Mar 20 17:24 ATLAS.root_0
2026-03-20 15:49:52 (77120): Guest Log: -rwxrwxrwx. 1 root root 243694005 Mar 20 19:49 HITS.pool.root.1
2026-03-20 15:49:52 (77120): Guest Log: -rwxrwxrwx. 1 root root      9729 Mar 20 17:24 init_data.xml
2026-03-20 15:49:52 (77120): Guest Log: -rwxrwxrwx. 1 root root    597546 Mar 17 02:03 input.tar.gz
2026-03-20 15:49:52 (77120): Guest Log: -rwxrwxrwx. 1 root root   1607680 Mar 20 19:49 result.tar.gz
2026-03-20 15:49:52 (77120): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 17 02:03 start_atlas.sh
2026-03-20 15:49:52 (77120): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-20 15:49:52 (77120): VM Completion File Detected.
2026-03-20 15:49:52 (77120): Powering off VM.
2026-03-20 15:49:53 (77120): Successfully stopped VM.
2026-03-20 15:49:53 (77120): Deregistering VM. (boinc_cdae3b5a795028ec, slot#3)
2026-03-20 15:49:53 (77120): Removing network bandwidth throttle group from VM.
2026-03-20 15:49:53 (77120): Removing VM from VirtualBox.
2026-03-20 15:49:58 (77120): called boinc_finish(0)

</stderr_txt>
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