Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:17:42 (68469): wrapper (7.7.26015): starting
06:17:42 (68469): wrapper: running run_atlas (--nthreads 3)
[2026-03-18 06:17:42] Arguments: --nthreads 3
[2026-03-18 06:17:42] Threads: 3
[2026-03-18 06:17:42] Checking for CVMFS
[2026-03-18 06:17:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 06:17:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 06:17:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 06:17:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 06:17:42] 2.9.2.0 4185933 1025 65200 157404 1 49 26932647 36864001 0 130560 0 204314 99.953 56064 5814 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-18 06:17:42] CVMFS is ok
[2026-03-18 06:17:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 06:17:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 06:17:42] Further information can be found at the LHC@home message board.
[2026-03-18 06:17:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 06:17:42] Checking for apptainer binary...
[2026-03-18 06:17:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 06:17:42] Running /usr/bin/apptainer --version
[2026-03-18 06:17:42] apptainer version 1.4.1-1.1
[2026-03-18 06:17:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 06:17:42] atlasA091
[2026-03-18 06:17:42] apptainer works
[2026-03-18 06:17:42] Set ATHENA_PROC_NUMBER=3
[2026-03-18 06:17:42] Set ATHENA_CORE_NUMBER=3
[2026-03-18 06:17:42] Starting ATLAS job with PandaID=7047769605
[2026-03-18 06:17:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 08:02:21]  *** The last 200 lines of the pilot log: ***
[2026-03-18 08:02:21] 2026-03-18 07:01:49,848 | INFO     | did not find any defunct processes belonging to 76931
[2026-03-18 08:02:21] 2026-03-18 07:01:49,849 | INFO     | ready for new job
[2026-03-18 08:02:21] 2026-03-18 07:01:49,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 08:02:21] 2026-03-18 07:01:49,849 | INFO     | **************************************
[2026-03-18 08:02:21] 2026-03-18 07:01:49,849 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-18 08:02:21] 2026-03-18 07:01:49,849 | INFO     | **************************************
[2026-03-18 08:02:21] 2026-03-18 07:01:49,849 | INFO     | 
[2026-03-18 08:02:21] 2026-03-18 07:01:49,850 | INFO     | architecture information:
[2026-03-18 08:02:21] 2026-03-18 07:01:49,850 | INFO     | executing command: cat /etc/os-release
[2026-03-18 08:02:21] 2026-03-18 07:01:49,857 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 08:02:21] 2026-03-18 07:01:49,860 | INFO     | cat /etc/os-release:
[2026-03-18 08:02:21] NAME="CentOS Linux"
[2026-03-18 08:02:21] VERSION="7 (Core)"
[2026-03-18 08:02:21] ID="centos"
[2026-03-18 08:02:21] ID_LIKE="rhel fedora"
[2026-03-18 08:02:21] VERSION_ID="7"
[2026-03-18 08:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 08:02:21] ANSI_COLOR="0;31"
[2026-03-18 08:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 08:02:21] HOME_URL="https://www.centos.org/"
[2026-03-18 08:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 08:02:21] 
[2026-03-18 08:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 08:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 08:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 08:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 08:02:21] 
[2026-03-18 08:02:21] 2026-03-18 07:01:49,861 | INFO     | **************************************
[2026-03-18 08:02:21] 2026-03-18 07:01:49,902 | INFO     | number of running child processes to parent process 76931: 1
[2026-03-18 08:02:21] 2026-03-18 07:01:49,902 | INFO     | maximum number of monitored processes: 6
[2026-03-18 08:02:21] 2026-03-18 07:01:49,902 | INFO     | aborting job monitoring since job object (job id=7047769605) has expired
[2026-03-18 08:02:21] 2026-03-18 07:01:50,364 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-18 08:02:21] 2026-03-18 07:01:50,376 | INFO     | sufficient remaining disk space (376455561216 B)
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | INFO     | update_server=False
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 08:02:21] 2026-03-18 07:01:50,377 | INFO     | will abort loop
[2026-03-18 08:02:21] 2026-03-18 07:01:50,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 08:02:21] 2026-03-18 07:01:50,999 | INFO     | all payload control threads have been joined
[2026-03-18 08:02:21] 2026-03-18 07:01:51,228 | INFO     | all job control threads have been joined
[2026-03-18 08:02:21] 2026-03-18 07:01:51,383 | INFO     | [job] retrieve thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,383 | INFO     | [job] queue monitor thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,383 | INFO     | [job] job monitor thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,400 | INFO     | all data control threads have been joined
[2026-03-18 08:02:21] 2026-03-18 07:01:51,577 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,604 | INFO     | [job] validate thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,665 | INFO     | [data] copytool_in thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,777 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,785 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:51,825 | INFO     | [payload] failed_post thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:52,004 | INFO     | [payload] control thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:52,212 | INFO     | [payload] validate_post thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:52,234 | INFO     | [job] control thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:52,406 | INFO     | [data] control thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:52,653 | INFO     | [data] copytool_out thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:01:54,384 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:02:00,451 | INFO     | job.realtimelogging is not enabled
[2026-03-18 08:02:21] 2026-03-18 07:02:00,803 | INFO     | [monitor] cgroup control has ended
[2026-03-18 08:02:21] 2026-03-18 07:02:01,457 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 08:02:21] 2026-03-18 07:02:01,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632580851520)>', '<ExcThread(monitor, started 139632222115584)>']
[2026-03-18 08:02:21] 2026-03-18 07:02:06,541 | INFO     | all workflow threads have been joined
[2026-03-18 08:02:21] 2026-03-18 07:02:06,541 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 08:02:21] 2026-03-18 07:02:06,541 | INFO     | traces error code: 0
[2026-03-18 08:02:21] 2026-03-18 07:02:06,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 08:02:21] 2026-03-18 07:02:21,294 | INFO     | PID=72506 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 08:02:21] 2026-03-18 07:02:21,294 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 08:02:21] 2026-03-18 07:02:21,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 08:02:21] 2026-03-18 07:02:21,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 08:02:21] 2026-03-18 07:02:21,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 08:02:21] 2026-03-18 07:02:21,294 | INFO     | [monitor] control thread has ended
[2026-03-18 08:02:21] 2026-03-18 07:02:21,342 [wrapper] ==== pilot stdout END ====
[2026-03-18 08:02:21] 2026-03-18 07:02:21,344 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 08:02:21] 2026-03-18 07:02:21,347 [wrapper] pilotpid: 72506
[2026-03-18 08:02:21] 2026-03-18 07:02:21,350 [wrapper] Pilot exit status: 0
[2026-03-18 08:02:21] 2026-03-18 07:02:21,357 [wrapper] pandaids: 7047769605
[2026-03-18 08:02:21] 2026-03-18 07:02:21,375 [wrapper] cleanup supervisor_pilot   83318 72507
[2026-03-18 08:02:21] 2026-03-18 07:02:21,378 [wrapper] Test setup, not cleaning
[2026-03-18 08:02:21] 2026-03-18 07:02:21,381 [wrapper] apfmon messages muted
[2026-03-18 08:02:21] 2026-03-18 07:02:21,383 [wrapper] ==== wrapper stdout END ====
[2026-03-18 08:02:21] 2026-03-18 07:02:21,386 [wrapper] ==== wrapper stderr END ====
[2026-03-18 08:02:21]  *** Error codes and diagnostics ***
[2026-03-18 08:02:21]     "exeErrorCode": 0,
[2026-03-18 08:02:21]     "exeErrorDiag": "",
[2026-03-18 08:02:21]     "pilotErrorCode": 0,
[2026-03-18 08:02:21]     "pilotErrorDiag": "",
[2026-03-18 08:02:21]  *** Listing of results directory ***
[2026-03-18 08:02:21] total 558804
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc    584627 Mar  9 22:23 pilot3.tar.gz
[2026-03-18 08:02:21] -rwx------ 1 boinc boinc     36322 Mar  9 22:24 runpilot2-wrapper.sh
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc      5111 Mar  9 22:24 queuedata.json
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc       100 Mar 18 06:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 08:02:21] -rwxr-xr-x 1 boinc boinc      7986 Mar 18 06:17 run_atlas
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc       105 Mar 18 06:17 job.xml
[2026-03-18 08:02:21] -rw-r--r-- 2 boinc boinc 324693328 Mar 18 06:17 EVNT.48998020._000083.pool.root.1
[2026-03-18 08:02:21] -rw-r--r-- 2 boinc boinc    597967 Mar 18 06:17 input.tar.gz
[2026-03-18 08:02:21] -rw-r--r-- 2 boinc boinc     15845 Mar 18 06:17 start_atlas.sh
[2026-03-18 08:02:21] drwxrwx--x 2 boinc boinc      4096 Mar 18 06:17 shared
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc         0 Mar 18 06:17 boinc_setup_complete
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc      6443 Mar 18 06:17 init_data.xml
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc         0 Mar 18 06:17 boinc_lockfile
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc      2611 Mar 18 06:17 pandaJob.out
[2026-03-18 08:02:21] -rw------- 1 boinc boinc   1011499 Mar 18 06:17 agis_schedconf.cvmfs.json
[2026-03-18 08:02:21] -rw------- 1 boinc boinc   1511579 Mar 18 06:17 agis_ddmendpoints.agis.ALL.json
[2026-03-18 08:02:21] -rw------- 1 boinc boinc       425 Mar 18 06:17 workernode_map.json
[2026-03-18 08:02:21] drwx------ 5 boinc boinc      4096 Mar 18 06:17 pilot3
[2026-03-18 08:02:21] -rw------- 1 boinc boinc 241239158 Mar 18 08:01 HITS.48998022._002098.pool.root.1
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc       529 Mar 18 08:01 boinc_task_state.xml
[2026-03-18 08:02:21] -rw------- 1 boinc boinc      1018 Mar 18 08:01 memory_monitor_summary.json
[2026-03-18 08:02:21] -rw------- 1 boinc boinc    274134 Mar 18 08:01 log.48998022._002098.job.log.tgz.1
[2026-03-18 08:02:21] -rw------- 1 boinc boinc      6306 Mar 18 08:01 heartbeat.json
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc      8192 Mar 18 08:01 boinc_mmap_file
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc        27 Mar 18 08:01 wrapper_checkpoint.txt
[2026-03-18 08:02:21] -rw------- 1 boinc boinc       745 Mar 18 08:02 pilotlog.txt
[2026-03-18 08:02:21] -rw------- 1 boinc boinc        95 Mar 18 08:02 pilot_heartbeat.json
[2026-03-18 08:02:21] -rw------- 1 boinc boinc    901460 Mar 18 08:02 log.48998022._002098.job.log.1
[2026-03-18 08:02:21] -rw------- 1 boinc boinc       357 Mar 18 08:02 output.list
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc       620 Mar 18 08:02 runtime_log
[2026-03-18 08:02:21] -rw------- 1 boinc boinc   1198080 Mar 18 08:02 result.tar.gz
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc      8911 Mar 18 08:02 runtime_log.err
[2026-03-18 08:02:21] -rw------- 1 boinc boinc       660 Mar 18 08:02 GMzLDmvGxJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbrdLDmVGvDen.diag
[2026-03-18 08:02:21] -rw-r--r-- 1 boinc boinc     10218 Mar 18 08:02 stderr.txt
[2026-03-18 08:02:21] HITS file was successfully produced:
[2026-03-18 08:02:21] -rw------- 1 boinc boinc 241239158 Mar 18 08:01 shared/HITS.pool.root.1
[2026-03-18 08:02:21]  *** Contents of shared directory: ***
[2026-03-18 08:02:21] total 554452
[2026-03-18 08:02:21] -rw-r--r-- 2 boinc boinc 324693328 Mar 18 06:17 ATLAS.root_0
[2026-03-18 08:02:21] -rw-r--r-- 2 boinc boinc    597967 Mar 18 06:17 input.tar.gz
[2026-03-18 08:02:21] -rw-r--r-- 2 boinc boinc     15845 Mar 18 06:17 start_atlas.sh
[2026-03-18 08:02:21] -rw------- 1 boinc boinc 241239158 Mar 18 08:01 HITS.pool.root.1
[2026-03-18 08:02:21] -rw------- 1 boinc boinc   1198080 Mar 18 08:02 result.tar.gz
08:02:23 (68469): run_atlas exited; CPU time 17746.198708
08:02:23 (68469): called boinc_finish(0)

</stderr_txt>
]]>

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