Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:26:34 (2204815): wrapper (7.7.26015): starting
00:26:34 (2204815): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 00:26:34] Arguments: --nthreads 4
[2026-03-19 00:26:34] Threads: 4
[2026-03-19 00:26:34] Checking for CVMFS
[2026-03-19 00:26:34] No cvmfs_config command found, will try listing directly
[2026-03-19 00:26:34] CVMFS is ok
[2026-03-19 00:26:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 00:26:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 00:26:34] Further information can be found at the LHC@home message board.
[2026-03-19 00:26:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 00:26:34] Checking for apptainer binary...
[2026-03-19 00:26:34] which: no apptainer in ((null))
[2026-03-19 00:26:34] apptainer is not installed, using version from CVMFS
[2026-03-19 00:26:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 00:26:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot232/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-19 00:26:34] apptainer works
[2026-03-19 00:26:34] Set ATHENA_PROC_NUMBER=4
[2026-03-19 00:26:34] Set ATHENA_CORE_NUMBER=4
[2026-03-19 00:26:34] Starting ATLAS job with PandaID=7056975182
[2026-03-19 00:26:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot232/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 04:00:27]  *** The last 200 lines of the pilot log: ***
[2026-03-19 04:00:27] 2026-03-19 02:59:34,301 | INFO     | mean y: 2335519.7177033494
[2026-03-19 04:00:27] 2026-03-19 02:59:34,301 | INFO     | intersect: 674482960.9257274
[2026-03-19 04:00:27] 2026-03-19 02:59:34,302 | INFO     | chi2: 1.9312264144894582
[2026-03-19 04:00:27] 2026-03-19 02:59:34,302 | INFO     | sum of square deviations: 2632440055.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,302 | INFO     | sum of deviations: 12211150525.499998
[2026-03-19 04:00:27] 2026-03-19 02:59:34,303 | INFO     | mean x: 1773882647.5
[2026-03-19 04:00:27] 2026-03-19 02:59:34,303 | INFO     | mean y: 2345532.3284313725
[2026-03-19 04:00:27] 2026-03-19 02:59:34,303 | INFO     | intersect: -8226198165.011317
[2026-03-19 04:00:27] 2026-03-19 02:59:34,303 | INFO     | chi2: 1.098255594610961
[2026-03-19 04:00:27] 2026-03-19 02:59:34,303 | INFO     | current chi2=1.098255594610961 (change=43.13170188792714 %)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,303 | INFO     | sum of square deviations: 2443580700.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | sum of deviations: 11795839193.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | mean x: 1773882495.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | mean y: 2345196.904522613
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | intersect: -8560675724.932692
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | chi2: 1.0987369603195798
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | current chi2=1.0987369603195798 (change=-0.04383002563163934 %)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | right removable region: 198
[2026-03-19 04:00:27] 2026-03-19 02:59:34,304 | INFO     | sum of square deviations: 2632440055.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,305 | INFO     | sum of deviations: -21549517305.5
[2026-03-19 04:00:27] 2026-03-19 02:59:34,305 | INFO     | mean x: 1773882952.5
[2026-03-19 04:00:27] 2026-03-19 02:59:34,305 | INFO     | mean y: 2351036.7009803923
[2026-03-19 04:00:27] 2026-03-19 02:59:34,305 | INFO     | intersect: 14523601505.528917
[2026-03-19 04:00:27] 2026-03-19 02:59:34,305 | INFO     | chi2: 0.8602775298319666
[2026-03-19 04:00:27] 2026-03-19 02:59:34,305 | INFO     | current chi2=0.8602775298319666 (change=55.45434117006987 %)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,305 | INFO     | sum of square deviations: 2443580700.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | sum of deviations: -20239362996.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | mean x: 1773883105.0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | mean y: 2349975.281407035
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | intersect: 14694831412.283499
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | chi2: 0.860402408548134
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | current chi2=0.860402408548134 (change=-0.014516096473168372 %)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | left removable region: 20
[2026-03-19 04:00:27] 2026-03-19 02:59:34,306 | INFO     | sum of square deviations: 1748737904.5
[2026-03-19 04:00:27] 2026-03-19 02:59:34,307 | INFO     | sum of deviations: -4516204021.499999
[2026-03-19 04:00:27] 2026-03-19 02:59:34,307 | INFO     | mean x: 1773883074.5
[2026-03-19 04:00:27] 2026-03-19 02:59:34,307 | INFO     | mean y: 2358445.241573034
[2026-03-19 04:00:27] 2026-03-19 02:59:34,307 | INFO     | intersect: 4583501139.1310005
[2026-03-19 04:00:27] 2026-03-19 02:59:34,307 | INFO     | chi2: 0.0076837545247273676
[2026-03-19 04:00:27] 2026-03-19 02:59:34,307 | INFO     | current memory leak: -2.58 B/s (using 178 data points, chi2=0.01)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,307 | INFO     | could have reported an average CPU frequency of 3527 MHz (11 samples)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | ..............................
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . Timing measurements:
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . get job = 0 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . initial setup = 11 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . payload setup = 15 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . stage-in = 0 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . payload execution = 12720 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . stage-out = 0 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | . log creation = 0 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,308 | INFO     | ..............................
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | 
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | job summary report
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | --------------------------------------------------
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | PanDA job id: 7056975182
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | task id: 49181388
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | errors: (none)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | pilot state: finished 
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | transexitcode: 0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | exeerrorcode: 0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | exeerrordiag: 
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | exitcode: 0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | exitmsg: OK
[2026-03-19 04:00:27] 2026-03-19 02:59:34,365 | INFO     | cpuconsumptiontime: 48330 s
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | nevents: 400
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | neventsw: 0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | pid: 2220472
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | pgrp: 2220472
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | corecount: 4
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | event service: False
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | sizes: {0: 2280315, 11: 2280315, 12739: 2310696, 12740: 2319718, 12742: 2319774, 12744: 2319968}
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | --------------------------------------------------
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | 
[2026-03-19 04:00:27] 2026-03-19 02:59:34,366 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot232/slots/0
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 04:00:27] 2026-03-19 02:59:34,407 | INFO     | job 7056975182 has completed (purged errors)
[2026-03-19 04:00:27] 2026-03-19 02:59:34,408 | INFO     | overall cleanup function is called
[2026-03-19 04:00:27] 2026-03-19 02:59:34,985 | WARNING  | process 2220472 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 04:00:27] 2026-03-19 02:59:35,331 | INFO     | using path: /var/lib/boinc/var/slot232/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 04:00:27] 2026-03-19 02:59:35,331 | INFO     | using path: /var/lib/boinc/var/slot232/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 04:00:27] 2026-03-19 02:59:35,332 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-19 04:00:27] 2026-03-19 02:59:35,332 | WARNING  | maxPSS not found in memory monitor output
[2026-03-19 04:00:27] 2026-03-19 02:59:35,332 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7056975182/payload.stdout) since it has not been created yet
[2026-03-19 04:00:27] 2026-03-19 02:59:35,332 | INFO     | executing command: df -mP /var/lib/boinc/var/slot232/slots/0
[2026-03-19 04:00:27] 2026-03-19 02:59:35,354 | INFO     | sufficient remaining disk space (21388853248 B)
[2026-03-19 04:00:27] 2026-03-19 02:59:35,354 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-19 04:00:27] 2026-03-19 02:59:35,355 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot232/slots/0/PanDA_Pilot-7056975182/HITS.49181388._000255.pool.root.1 since it does not exist
[2026-03-19 04:00:27] 2026-03-19 02:59:35,422 | INFO     | --- collectZombieJob: --- 10, [2220472]
[2026-03-19 04:00:27] 2026-03-19 02:59:35,422 | INFO     | zombie collector waiting for pid 2220472
[2026-03-19 04:00:27] 2026-03-19 02:59:35,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 04:00:27] 2026-03-19 02:59:35,422 | INFO     | collected zombie processes
[2026-03-19 04:00:27] 2026-03-19 02:59:35,422 | INFO     | will attempt to kill all subprocesses of pid=2220472
[2026-03-19 04:00:27] 2026-03-19 02:59:36,479 | INFO     | process IDs to be killed: [2220472] (in reverse order)
[2026-03-19 04:00:27] 2026-03-19 02:59:36,497 | INFO     | number of running child processes to parent process 2220472: 1
[2026-03-19 04:00:27] 2026-03-19 02:59:36,498 | INFO     | maximum number of monitored processes: 6
[2026-03-19 04:00:27] 2026-03-19 02:59:36,498 | INFO     | aborting job monitoring since job object (job id=7056975182) has expired
[2026-03-19 04:00:27] 2026-03-19 02:59:36,852 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 04:00:27] 2026-03-19 02:59:36,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 04:00:27] 2026-03-19 02:59:36,882 | INFO     | did not find any defunct processes belonging to 2220472
[2026-03-19 04:00:27] 2026-03-19 02:59:36,913 | INFO     | did not find any defunct processes belonging to 2220472
[2026-03-19 04:00:27] 2026-03-19 02:59:36,913 | INFO     | ready for new job
[2026-03-19 04:00:27] 2026-03-19 02:59:36,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 04:00:27] 2026-03-19 02:59:36,914 | INFO     | **************************************
[2026-03-19 04:00:27] 2026-03-19 02:59:36,915 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 04:00:27] 2026-03-19 02:59:36,915 | INFO     | **************************************
[2026-03-19 04:00:27] 2026-03-19 02:59:36,915 | INFO     | 
[2026-03-19 04:00:27] 2026-03-19 02:59:36,920 | INFO     | architecture information:
[2026-03-19 04:00:27] 2026-03-19 02:59:36,921 | INFO     | executing command: cat /etc/os-release
[2026-03-19 04:00:27] 2026-03-19 02:59:36,980 | INFO     | cat /etc/os-release:
[2026-03-19 04:00:27] NAME="CentOS Linux"
[2026-03-19 04:00:27] VERSION="7 (Core)"
[2026-03-19 04:00:27] ID="centos"
[2026-03-19 04:00:27] ID_LIKE="rhel fedora"
[2026-03-19 04:00:27] VERSION_ID="7"
[2026-03-19 04:00:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 04:00:27] ANSI_COLOR="0;31"
[2026-03-19 04:00:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 04:00:27] HOME_URL="https://www.centos.org/"
[2026-03-19 04:00:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 04:00:27] 
[2026-03-19 04:00:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 04:00:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 04:00:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 04:00:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 04:00:27] 
[2026-03-19 04:00:27] 2026-03-19 02:59:36,980 | INFO     | **************************************
[2026-03-19 04:00:27] 2026-03-19 02:59:37,483 | INFO     | executing command: df -mP /var/lib/boinc/var/slot232/slots/0
[2026-03-19 04:00:27] 2026-03-19 02:59:37,501 | INFO     | sufficient remaining disk space (21389901824 B)
[2026-03-19 04:00:27] 2026-03-19 02:59:37,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 04:00:27] 2026-03-19 02:59:37,502 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 04:00:27] 2026-03-19 02:59:37,502 | INFO     | update_server=False
[2026-03-19 04:00:27] 2026-03-19 02:59:37,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 04:00:27] 2026-03-19 02:59:37,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 04:00:27] 2026-03-19 02:59:37,502 | INFO     | aborting loop
[2026-03-19 04:00:27] 2026-03-19 02:59:37,517 | INFO     | all data control threads have been joined
[2026-03-19 04:00:27] 2026-03-19 02:59:37,725 | INFO     | all job control threads have been joined
[2026-03-19 04:00:27] 2026-03-19 02:59:37,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 04:00:27] 2026-03-19 02:59:38,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 04:00:27] 2026-03-19 02:59:38,119 | INFO     | all payload control threads have been joined
[2026-03-19 04:00:27] 2026-03-19 02:59:38,507 | INFO     | [job] job monitor thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:38,507 | INFO     | [job] retrieve thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:38,522 | INFO     | [data] control thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:38,730 | INFO     | [job] control thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,036 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,124 | INFO     | [payload] control thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,131 | INFO     | [job] validate thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,164 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,311 | INFO     | [data] copytool_in thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,328 | INFO     | [payload] failed_post thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,411 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 04:00:27] 2026-03-19 02:59:39,472 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:39,701 | INFO     | [payload] validate_post thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:40,058 | INFO     | [data] copytool_out thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:40,416 | INFO     | [job] queue monitor thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:41,942 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 04:00:27] 2026-03-19 02:59:47,734 | INFO     | job.realtimelogging is not enabled
[2026-03-19 04:00:27] 2026-03-19 02:59:48,739 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 04:00:27] 2026-03-19 03:00:06,908 | INFO     | PID=2209442 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 04:00:27] 2026-03-19 03:00:06,909 | INFO     | .. there are 49 such processes running
[2026-03-19 04:00:27] 2026-03-19 03:00:06,909 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 04:00:27] 2026-03-19 03:00:06,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 04:00:27] 2026-03-19 03:00:06,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 04:00:27] 2026-03-19 03:00:20,140 | INFO     | [monitor] cgroup control has ended
[2026-03-19 04:00:27] 2026-03-19 03:00:21,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22505422751552)>', '<ExcThread(monitor, started 22505176954624)>']
[2026-03-19 04:00:27] 2026-03-19 03:00:21,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 04:00:27] 2026-03-19 03:00:21,985 | INFO     | [monitor] control thread has ended
[2026-03-19 04:00:27] 2026-03-19 03:00:26,662 | INFO     | all workflow threads have been joined
[2026-03-19 04:00:27] 2026-03-19 03:00:26,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 04:00:27] 2026-03-19 03:00:26,662 | INFO     | traces error code: 0
[2026-03-19 04:00:27] 2026-03-19 03:00:26,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 04:00:27] 2026-03-19 03:00:26,806 [wrapper] ==== pilot stdout END ====
[2026-03-19 04:00:27] 2026-03-19 03:00:26,820 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 04:00:27] 2026-03-19 03:00:26,838 [wrapper] pilotpid: 2209442
[2026-03-19 04:00:27] 2026-03-19 03:00:26,850 [wrapper] Pilot exit status: 0
[2026-03-19 04:00:27] 2026-03-19 03:00:26,881 [wrapper] pandaids: 7056975182
[2026-03-19 04:00:27] 2026-03-19 03:00:27,021 [wrapper] cleanup supervisor_pilot 3143528 2209443
[2026-03-19 04:00:27] 2026-03-19 03:00:27,032 [wrapper] Test setup, not cleaning
[2026-03-19 04:00:27] 2026-03-19 03:00:27,039 [wrapper] apfmon messages muted
[2026-03-19 04:00:27] 2026-03-19 03:00:27,057 [wrapper] ==== wrapper stdout END ====
[2026-03-19 04:00:27] 2026-03-19 03:00:27,059 [wrapper] ==== wrapper stderr END ====
[2026-03-19 04:00:27]  *** Error codes and diagnostics ***
[2026-03-19 04:00:27]     "exeErrorCode": 0,
[2026-03-19 04:00:27]     "exeErrorDiag": "",
[2026-03-19 04:00:27]     "pilotErrorCode": 0,
[2026-03-19 04:00:27]     "pilotErrorDiag": "",
[2026-03-19 04:00:27]  *** Listing of results directory ***
[2026-03-19 04:00:27] total 477960
[2026-03-19 04:00:27] -rwx------. 1 boinc boinc     36322 Mar 16 17:43 runpilot2-wrapper.sh
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc    585013 Mar 16 17:45 pilot3.tar.gz
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc      5111 Mar 16 17:45 queuedata.json
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc       100 Mar 19 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 04:00:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 00:26 run_atlas
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc       105 Mar 19 00:26 job.xml
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc      6709 Mar 19 00:26 init_data.xml
[2026-03-19 04:00:27] -rw-r--r--. 2 boinc boinc 240313605 Mar 19 00:26 EVNT.49134998._000011.pool.root.1
[2026-03-19 04:00:27] -rw-r--r--. 2 boinc boinc     15845 Mar 19 00:26 start_atlas.sh
[2026-03-19 04:00:27] drwxrwx--x. 2 boinc boinc      4096 Mar 19 00:26 shared
[2026-03-19 04:00:27] -rw-r--r--. 2 boinc boinc    597537 Mar 19 00:26 input.tar.gz
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc         0 Mar 19 00:26 boinc_lockfile
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc      2613 Mar 19 00:26 pandaJob.out
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc   1010350 Mar 19 00:26 agis_schedconf.cvmfs.json
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc       445 Mar 19 00:26 workernode_map.json
[2026-03-19 04:00:27] drwx------. 5 boinc boinc      4096 Mar 19 00:26 pilot3
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc 240870656 Mar 19 03:59 HITS.49181388._000255.pool.root.1
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc       530 Mar 19 03:59 boinc_task_state.xml
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc        95 Mar 19 03:59 pilot_heartbeat.json
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc      1030 Mar 19 03:59 memory_monitor_summary.json
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc   1511579 Mar 19 03:59 agis_ddmendpoints.agis.ALL.json
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc    368200 Mar 19 03:59 log.49181388._000255.job.log.tgz.1
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc      6355 Mar 19 03:59 heartbeat.json
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc        28 Mar 19 04:00 wrapper_checkpoint.txt
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc      8192 Mar 19 04:00 boinc_mmap_file
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc      4902 Mar 19 04:00 pilotlog.txt
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc   1782942 Mar 19 04:00 log.49181388._000255.job.log.1
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc       357 Mar 19 04:00 output.list
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc       620 Mar 19 04:00 runtime_log
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc   2170880 Mar 19 04:00 result.tar.gz
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc       665 Mar 19 04:00 sLhMDmeDQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYgyLDmB1NwOn.diag
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc      9222 Mar 19 04:00 runtime_log.err
[2026-03-19 04:00:27] -rw-r--r--. 1 boinc boinc     21278 Mar 19 04:00 stderr.txt
[2026-03-19 04:00:27] HITS file was successfully produced:
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc 240870656 Mar 19 03:59 shared/HITS.pool.root.1
[2026-03-19 04:00:27]  *** Contents of shared directory: ***
[2026-03-19 04:00:27] total 472640
[2026-03-19 04:00:27] -rw-r--r--. 2 boinc boinc 240313605 Mar 19 00:26 ATLAS.root_0
[2026-03-19 04:00:27] -rw-r--r--. 2 boinc boinc     15845 Mar 19 00:26 start_atlas.sh
[2026-03-19 04:00:27] -rw-r--r--. 2 boinc boinc    597537 Mar 19 00:26 input.tar.gz
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc 240870656 Mar 19 03:59 HITS.pool.root.1
[2026-03-19 04:00:27] -rw-------. 1 boinc boinc   2170880 Mar 19 04:00 result.tar.gz
04:00:29 (2204815): run_atlas exited; CPU time 48914.414102
04:00:29 (2204815): called boinc_finish(0)

</stderr_txt>
]]>

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