Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:02:37 (29740): wrapper (7.7.26015): starting
07:02:37 (29740): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 07:02:37] Arguments: --nthreads 8
[2026-03-17 07:02:37] Threads: 8
[2026-03-17 07:02:37] Checking for CVMFS
[2026-03-17 07:02:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 07:02:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 07:02:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 07:02:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 07:02:38] 2.11.2.0 2934 19880 83056 157368 3 52 18746015 20275200 1 130560 0 7766603 99.919 1120911 18192 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 07:02:38] CVMFS is ok
[2026-03-17 07:02:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 07:02:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 07:02:38] Further information can be found at the LHC@home message board.
[2026-03-17 07:02:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 07:02:38] Checking for apptainer binary...
[2026-03-17 07:02:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 07:02:38] Running /usr/bin/apptainer --version
[2026-03-17 07:02:38] apptainer version 1.3.2-1.el7
[2026-03-17 07:02:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 07:02:40] c-115-12.aglt2.org
[2026-03-17 07:02:40] apptainer works
[2026-03-17 07:02:40] Set ATHENA_PROC_NUMBER=8
[2026-03-17 07:02:40] Set ATHENA_CORE_NUMBER=8
[2026-03-17 07:02:40] Starting ATLAS job with PandaID=7057110486
[2026-03-17 07:02:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:10:55 (20647): wrapper (7.7.26015): starting
09:10:55 (20647): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 09:10:55] Arguments: --nthreads 8
[2026-03-17 09:10:55] Threads: 8
[2026-03-17 09:10:55] This job has been restarted, cleaning up previous attempt
[2026-03-17 09:10:55] Checking for CVMFS
[2026-03-17 09:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 09:10:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 09:10:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 09:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 09:10:56] 2.11.2.0 2934 20008 87108 157372 3 32 18974424 20275200 1 130560 0 7818754 99.919 1126714 18241 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 09:10:56] CVMFS is ok
[2026-03-17 09:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 09:10:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 09:10:56] Further information can be found at the LHC@home message board.
[2026-03-17 09:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 09:10:56] Checking for apptainer binary...
[2026-03-17 09:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 09:10:56] Running /usr/bin/apptainer --version
[2026-03-17 09:10:56] apptainer version 1.3.2-1.el7
[2026-03-17 09:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 09:10:58] c-115-12.aglt2.org
[2026-03-17 09:10:58] apptainer works
[2026-03-17 09:10:58] Set ATHENA_PROC_NUMBER=8
[2026-03-17 09:10:58] Set ATHENA_CORE_NUMBER=8
[2026-03-17 09:10:58] Starting ATLAS job with PandaID=7057110486
[2026-03-17 09:10:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 13:58:50]  *** The last 200 lines of the pilot log: ***
[2026-03-17 13:58:50] 2026-03-17 17:58:10,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 13:58:50] 2026-03-17 17:58:10,317 | INFO     | fitting pss+swap vs Time
[2026-03-17 13:58:50] 2026-03-17 17:58:10,317 | INFO     | sum of square deviations: 6953769450.5
[2026-03-17 13:58:50] 2026-03-17 17:58:10,319 | INFO     | sum of deviations: 69995979392.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,319 | INFO     | mean x: 1773761671.5
[2026-03-17 13:58:50] 2026-03-17 17:58:10,319 | INFO     | mean y: 2539086.1134751774
[2026-03-17 13:58:50] 2026-03-17 17:58:10,320 | INFO     | intersect: -17851976552.984425
[2026-03-17 13:58:50] 2026-03-17 17:58:10,320 | INFO     | chi2: 1.6414511333968524
[2026-03-17 13:58:50] 2026-03-17 17:58:10,320 | INFO     | sum of square deviations: 6590404498.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,322 | INFO     | sum of deviations: 68457297641.00003
[2026-03-17 13:58:50] 2026-03-17 17:58:10,322 | INFO     | mean x: 1773761519.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,322 | INFO     | mean y: 2538440.2996389894
[2026-03-17 13:58:50] 2026-03-17 17:58:10,323 | INFO     | intersect: -18422266939.580296
[2026-03-17 13:58:50] 2026-03-17 17:58:10,323 | INFO     | chi2: 1.64155725561606
[2026-03-17 13:58:50] 2026-03-17 17:58:10,323 | INFO     | current chi2=1.64155725561606 (change=-0.006465146421262711 %)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,323 | INFO     | right removable region: 276
[2026-03-17 13:58:50] 2026-03-17 17:58:10,323 | INFO     | sum of square deviations: 6590404498.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,325 | INFO     | sum of deviations: 22133464235.999996
[2026-03-17 13:58:50] 2026-03-17 17:58:10,325 | INFO     | mean x: 1773761824.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,325 | INFO     | mean y: 2559041.837545126
[2026-03-17 13:58:50] 2026-03-17 17:58:10,326 | INFO     | intersect: -5954509891.730987
[2026-03-17 13:58:50] 2026-03-17 17:58:10,326 | INFO     | chi2: 0.15888942298196967
[2026-03-17 13:58:50] 2026-03-17 17:58:10,326 | INFO     | current chi2=0.15888942298196967 (change=90.32018561203459 %)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,326 | INFO     | sum of square deviations: 6239923508.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,328 | INFO     | sum of deviations: 7579581474.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,328 | INFO     | mean x: 1773761976.5
[2026-03-17 13:58:50] 2026-03-17 17:58:10,328 | INFO     | mean y: 2565374.8088235296
[2026-03-17 13:58:50] 2026-03-17 17:58:10,329 | INFO     | intersect: -2152008058.5238824
[2026-03-17 13:58:50] 2026-03-17 17:58:10,329 | INFO     | chi2: 0.07351433797931159
[2026-03-17 13:58:50] 2026-03-17 17:58:10,329 | INFO     | current chi2=0.07351433797931159 (change=53.73239036329448 %)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,329 | INFO     | sum of square deviations: 5902093918.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,331 | INFO     | sum of deviations: -1792866128.0000014
[2026-03-17 13:58:50] 2026-03-17 17:58:10,331 | INFO     | mean x: 1773762129.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,331 | INFO     | mean y: 2569580.6104868916
[2026-03-17 13:58:50] 2026-03-17 17:58:10,331 | INFO     | intersect: 541381413.2237661
[2026-03-17 13:58:50] 2026-03-17 17:58:10,332 | INFO     | chi2: 0.018042856935043025
[2026-03-17 13:58:50] 2026-03-17 17:58:10,332 | INFO     | current chi2=0.018042856935043025 (change=75.45668310293341 %)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,332 | INFO     | sum of square deviations: 5576683165.5
[2026-03-17 13:58:50] 2026-03-17 17:58:10,334 | INFO     | sum of deviations: -2348848188.000004
[2026-03-17 13:58:50] 2026-03-17 17:58:10,334 | INFO     | mean x: 1773762281.5
[2026-03-17 13:58:50] 2026-03-17 17:58:10,334 | INFO     | mean y: 2569839.381679389
[2026-03-17 13:58:50] 2026-03-17 17:58:10,334 | INFO     | intersect: 749662366.8214164
[2026-03-17 13:58:50] 2026-03-17 17:58:10,335 | INFO     | chi2: 0.01775553226838502
[2026-03-17 13:58:50] 2026-03-17 17:58:10,335 | INFO     | current chi2=0.01775553226838502 (change=1.592456603144484 %)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,335 | INFO     | left removable region: 40
[2026-03-17 13:58:50] 2026-03-17 17:58:10,335 | INFO     | sum of square deviations: 4075741535.0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,336 | INFO     | sum of deviations: 1521204580.0000012
[2026-03-17 13:58:50] 2026-03-17 17:58:10,337 | INFO     | mean x: 1773762708.5
[2026-03-17 13:58:50] 2026-03-17 17:58:10,337 | INFO     | mean y: 2567444.0169491526
[2026-03-17 13:58:50] 2026-03-17 17:58:10,337 | INFO     | intersect: -659460786.3878542
[2026-03-17 13:58:50] 2026-03-17 17:58:10,337 | INFO     | chi2: 0.014987472113246423
[2026-03-17 13:58:50] 2026-03-17 17:58:10,337 | INFO     | current memory leak: 0.37 B/s (using 236 data points, chi2=0.01)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | could have reported an average CPU frequency of 1729 MHz (13 samples)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | ..............................
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | . Timing measurements:
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | . get job = 0 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | . initial setup = 1 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | . payload setup = 8 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | . stage-in = 0 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,338 | INFO     | . payload execution = 17185 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,339 | INFO     | . stage-out = 2 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,339 | INFO     | . log creation = 0 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,339 | INFO     | ..............................
[2026-03-17 13:58:50] 2026-03-17 17:58:10,414 | INFO     | 
[2026-03-17 13:58:50] 2026-03-17 17:58:10,415 | INFO     | job summary report
[2026-03-17 13:58:50] 2026-03-17 17:58:10,415 | INFO     | --------------------------------------------------
[2026-03-17 13:58:50] 2026-03-17 17:58:10,415 | INFO     | PanDA job id: 7057110486
[2026-03-17 13:58:50] 2026-03-17 17:58:10,415 | INFO     | task id: 49176283
[2026-03-17 13:58:50] 2026-03-17 17:58:10,415 | INFO     | errors: (none)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,416 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 13:58:50] 2026-03-17 17:58:10,416 | INFO     | pilot state: finished 
[2026-03-17 13:58:50] 2026-03-17 17:58:10,416 | INFO     | transexitcode: 0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,416 | INFO     | exeerrorcode: 0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,416 | INFO     | exeerrordiag: 
[2026-03-17 13:58:50] 2026-03-17 17:58:10,416 | INFO     | exitcode: 0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,417 | INFO     | exitmsg: OK
[2026-03-17 13:58:50] 2026-03-17 17:58:10,417 | INFO     | cpuconsumptiontime: 129575 s
[2026-03-17 13:58:50] 2026-03-17 17:58:10,417 | INFO     | nevents: 400
[2026-03-17 13:58:50] 2026-03-17 17:58:10,417 | INFO     | neventsw: 0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,417 | INFO     | pid: 27134
[2026-03-17 13:58:50] 2026-03-17 17:58:10,417 | INFO     | pgrp: 27134
[2026-03-17 13:58:50] 2026-03-17 17:58:10,418 | INFO     | corecount: 8
[2026-03-17 13:58:50] 2026-03-17 17:58:10,418 | INFO     | event service: False
[2026-03-17 13:58:50] 2026-03-17 17:58:10,418 | INFO     | sizes: {0: 2280302, 11: 2280302, 17197: 2312394, 17199: 2321392, 17203: 2321642}
[2026-03-17 13:58:50] 2026-03-17 17:58:10,418 | INFO     | --------------------------------------------------
[2026-03-17 13:58:50] 2026-03-17 17:58:10,418 | INFO     | 
[2026-03-17 13:58:50] 2026-03-17 17:58:10,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-17 13:58:50] 2026-03-17 17:58:10,449 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,449 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,449 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,450 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,450 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,450 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,450 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,450 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,452 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,453 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 13:58:50] 2026-03-17 17:58:10,453 | INFO     | job 7057110486 has completed (purged errors)
[2026-03-17 13:58:50] 2026-03-17 17:58:10,453 | INFO     | overall cleanup function is called
[2026-03-17 13:58:50] 2026-03-17 17:58:11,461 | INFO     | --- collectZombieJob: --- 10, [27134]
[2026-03-17 13:58:50] 2026-03-17 17:58:11,462 | INFO     | zombie collector waiting for pid 27134
[2026-03-17 13:58:50] 2026-03-17 17:58:11,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 13:58:50] 2026-03-17 17:58:11,462 | INFO     | collected zombie processes
[2026-03-17 13:58:50] 2026-03-17 17:58:11,462 | INFO     | will attempt to kill all subprocesses of pid=27134
[2026-03-17 13:58:50] 2026-03-17 17:58:11,540 | INFO     | process IDs to be killed: [27134] (in reverse order)
[2026-03-17 13:58:50] 2026-03-17 17:58:11,602 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 13:58:50] 2026-03-17 17:58:11,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 13:58:50] 2026-03-17 17:58:11,606 | INFO     | did not find any defunct processes belonging to 27134
[2026-03-17 13:58:50] 2026-03-17 17:58:11,608 | INFO     | did not find any defunct processes belonging to 27134
[2026-03-17 13:58:50] 2026-03-17 17:58:11,609 | INFO     | ready for new job
[2026-03-17 13:58:50] 2026-03-17 17:58:11,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 13:58:50] 2026-03-17 17:58:11,610 | INFO     | **************************************
[2026-03-17 13:58:50] 2026-03-17 17:58:11,611 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 13:58:50] 2026-03-17 17:58:11,611 | INFO     | **************************************
[2026-03-17 13:58:50] 2026-03-17 17:58:11,611 | INFO     | 
[2026-03-17 13:58:50] 2026-03-17 17:58:11,611 | INFO     | architecture information:
[2026-03-17 13:58:50] 2026-03-17 17:58:11,612 | INFO     | executing command: cat /etc/os-release
[2026-03-17 13:58:50] 2026-03-17 17:58:11,631 | INFO     | cat /etc/os-release:
[2026-03-17 13:58:50] NAME="CentOS Linux"
[2026-03-17 13:58:50] VERSION="7 (Core)"
[2026-03-17 13:58:50] ID="centos"
[2026-03-17 13:58:50] ID_LIKE="rhel fedora"
[2026-03-17 13:58:50] VERSION_ID="7"
[2026-03-17 13:58:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 13:58:50] ANSI_COLOR="0;31"
[2026-03-17 13:58:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 13:58:50] HOME_URL="https://www.centos.org/"
[2026-03-17 13:58:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 13:58:50] 
[2026-03-17 13:58:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 13:58:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 13:58:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 13:58:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 13:58:50] 
[2026-03-17 13:58:50] 2026-03-17 17:58:11,631 | INFO     | **************************************
[2026-03-17 13:58:50] 2026-03-17 17:58:12,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-17 13:58:50] 2026-03-17 17:58:12,155 | INFO     | sufficient remaining disk space (18601738240 B)
[2026-03-17 13:58:50] 2026-03-17 17:58:12,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 13:58:50] 2026-03-17 17:58:12,156 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 13:58:50] 2026-03-17 17:58:12,156 | INFO     | update_server=False
[2026-03-17 13:58:50] 2026-03-17 17:58:12,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 13:58:50] 2026-03-17 17:58:12,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 13:58:50] 2026-03-17 17:58:12,157 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 13:58:50] 2026-03-17 17:58:12,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 13:58:50] 2026-03-17 17:58:12,475 | INFO     | all payload control threads have been joined
[2026-03-17 13:58:50] 2026-03-17 17:58:12,603 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 13:58:50] 2026-03-17 17:58:12,603 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 13:58:50] 2026-03-17 17:58:12,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 13:58:50] 2026-03-17 17:58:12,603 | INFO     | will abort loop
[2026-03-17 13:58:50] 2026-03-17 17:58:12,843 | INFO     | all data control threads have been joined
[2026-03-17 13:58:50] 2026-03-17 17:58:13,160 | INFO     | [job] retrieve thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,164 | INFO     | [job] queue monitor thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,197 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,451 | INFO     | [payload] failed_post thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,481 | INFO     | [payload] control thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,544 | INFO     | all job control threads have been joined
[2026-03-17 13:58:50] 2026-03-17 17:58:13,609 | INFO     | [job] job monitor thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,638 | INFO     | [data] copytool_in thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,848 | INFO     | [data] control thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,856 | INFO     | [job] validate thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:13,919 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:14,164 | INFO     | [data] copytool_out thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:14,549 | INFO     | [job] control thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:14,576 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:14,602 | INFO     | [payload] validate_post thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:16,163 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:22,626 | INFO     | job.realtimelogging is not enabled
[2026-03-17 13:58:50] 2026-03-17 17:58:23,632 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 13:58:50] 2026-03-17 17:58:42,245 | INFO     | PID=24681 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-17 13:58:50] 2026-03-17 17:58:42,246 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 13:58:50] 2026-03-17 17:58:42,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 13:58:50] 2026-03-17 17:58:42,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 13:58:50] 2026-03-17 17:58:43,300 | INFO     | [monitor] cgroup control has ended
[2026-03-17 13:58:50] 2026-03-17 17:58:44,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685006014272)>', '<ExcThread(monitor, started 139684231485184)>']
[2026-03-17 13:58:50] 2026-03-17 17:58:45,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 13:58:50] 2026-03-17 17:58:45,262 | INFO     | [monitor] control thread has ended
[2026-03-17 13:58:50] 2026-03-17 17:58:49,976 | INFO     | all workflow threads have been joined
[2026-03-17 13:58:50] 2026-03-17 17:58:49,976 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 13:58:50] 2026-03-17 17:58:49,976 | INFO     | traces error code: 0
[2026-03-17 13:58:50] 2026-03-17 17:58:49,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 13:58:50] 2026-03-17 17:58:50,077 [wrapper] ==== pilot stdout END ====
[2026-03-17 13:58:50] 2026-03-17 17:58:50,082 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 13:58:50] 2026-03-17 17:58:50,087 [wrapper] pilotpid: 24681
[2026-03-17 13:58:50] 2026-03-17 17:58:50,092 [wrapper] Pilot exit status: 0
[2026-03-17 13:58:50] 2026-03-17 17:58:50,110 [wrapper] pandaids: 7057110486 7057110486
[2026-03-17 13:58:50] 2026-03-17 17:58:50,156 [wrapper] cleanup supervisor_pilot  1461 24682
[2026-03-17 13:58:50] 2026-03-17 17:58:50,161 [wrapper] Test setup, not cleaning
[2026-03-17 13:58:50] 2026-03-17 17:58:50,166 [wrapper] apfmon messages muted
[2026-03-17 13:58:50] 2026-03-17 17:58:50,171 [wrapper] ==== wrapper stdout END ====
[2026-03-17 13:58:50] 2026-03-17 17:58:50,176 [wrapper] ==== wrapper stderr END ====
[2026-03-17 13:58:50]  *** Error codes and diagnostics ***
[2026-03-17 13:58:50]     "exeErrorCode": 0,
[2026-03-17 13:58:50]     "exeErrorDiag": "",
[2026-03-17 13:58:50]     "pilotErrorCode": 0,
[2026-03-17 13:58:50]     "pilotErrorDiag": "",
[2026-03-17 13:58:50]  *** Listing of results directory ***
[2026-03-17 13:58:50] total 716132
[2026-03-17 13:58:50] drwx------ 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas    585013 Mar 16 20:55 pilot3.tar.gz
[2026-03-17 13:58:50] -rwx------ 1 boincer umatlas     36322 Mar 16 20:58 runpilot2-wrapper.sh
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas      5111 Mar 16 21:00 queuedata.json
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas       100 Mar 17 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 13:58:50] -rwxr-xr-x 1 boincer umatlas      7986 Mar 17 07:02 run_atlas
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas       105 Mar 17 07:02 job.xml
[2026-03-17 13:58:50] -rw-r--r-- 3 boincer umatlas 242782662 Mar 17 07:02 EVNT.49133333._000010.pool.root.1
[2026-03-17 13:58:50] -rw-r--r-- 3 boincer umatlas 242782662 Mar 17 07:02 ATLAS.root_0
[2026-03-17 13:58:50] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 07:02 start_atlas.sh
[2026-03-17 13:58:50] drwxrwx--x 2 boincer umatlas      4096 Mar 17 07:02 shared
[2026-03-17 13:58:50] -rw-r--r-- 2 boincer umatlas    597534 Mar 17 07:02 input.tar.gz
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas         0 Mar 17 07:02 boinc_lockfile
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas      2615 Mar 17 09:10 pandaJob.out
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas        57 Mar 17 09:10 setup.sh.local
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas   1006434 Mar 17 09:11 agis_schedconf.cvmfs.json
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas       433 Mar 17 09:11 workernode_map.json
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas      5912 Mar 17 13:55 init_data.xml
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas 238042154 Mar 17 13:57 HITS.49176283._000237.pool.root.1
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas       531 Mar 17 13:57 boinc_task_state.xml
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas      1050 Mar 17 13:58 memory_monitor_summary.json
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas        96 Mar 17 13:58 pilot_heartbeat.json
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas   1511579 Mar 17 13:58 agis_ddmendpoints.agis.ALL.json
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas    499981 Mar 17 13:58 log.49176283._000237.job.log.tgz.1
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas      6401 Mar 17 13:58 heartbeat.json
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas        29 Mar 17 13:58 wrapper_checkpoint.txt
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas      8192 Mar 17 13:58 boinc_mmap_file
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas      5000 Mar 17 13:58 pilotlog.txt
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas   2385241 Mar 17 13:58 log.49176283._000237.job.log.1
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas       357 Mar 17 13:58 output.list
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas       620 Mar 17 13:58 runtime_log
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas   2897920 Mar 17 13:58 result.tar.gz
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas       789 Mar 17 13:58 UG9LDmUwXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmtawLDmIpSUtn.diag
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas      9427 Mar 17 13:58 runtime_log.err
[2026-03-17 13:58:50] -rw-r--r-- 1 boincer umatlas     23026 Mar 17 13:58 stderr.txt
[2026-03-17 13:58:50] HITS file was successfully produced:
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas 238042154 Mar 17 13:57 shared/HITS.pool.root.1
[2026-03-17 13:58:50]  *** Contents of shared directory: ***
[2026-03-17 13:58:50] total 472996
[2026-03-17 13:58:50] -rw-r--r-- 3 boincer umatlas 242782662 Mar 17 07:02 ATLAS.root_0
[2026-03-17 13:58:50] -rw-r--r-- 2 boincer umatlas     15845 Mar 17 07:02 start_atlas.sh
[2026-03-17 13:58:50] -rw-r--r-- 2 boincer umatlas    597534 Mar 17 07:02 input.tar.gz
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas 238042154 Mar 17 13:57 HITS.pool.root.1
[2026-03-17 13:58:50] -rw------- 1 boincer umatlas   2897920 Mar 17 13:58 result.tar.gz
13:58:51 (20647): run_atlas exited; CPU time 129653.199944
13:58:51 (20647): called boinc_finish(0)

</stderr_txt>
]]>

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