Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:11:19 (31817): wrapper (7.7.26015): starting
14:11:19 (31817): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 14:11:19] Arguments: --nthreads 8
[2026-03-18 14:11:19] Threads: 8
[2026-03-18 14:11:19] Checking for CVMFS
[2026-03-18 14:11:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 14:11:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 14:11:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 14:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 14:11:23] 2.11.2.0 26158 133377 137808 157415 1 297 23314955 25165825 909 130560 160 30122471 99.783 30123103 971 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 14:11:23] CVMFS is ok
[2026-03-18 14:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 14:11:23] Checking for apptainer binary...
[2026-03-18 14:11:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 14:11:23] Running /usr/bin/apptainer --version
[2026-03-18 14:11:23] apptainer version 1.3.2-1.el7
[2026-03-18 14:11:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 14:11:32] cg-vwn378.simple-grid.lan
[2026-03-18 14:11:32] apptainer works
[2026-03-18 14:11:33] Set ATHENA_PROC_NUMBER=8
[2026-03-18 14:11:33] Set ATHENA_CORE_NUMBER=8
[2026-03-18 14:11:33] Starting ATLAS job with PandaID=7057088484
[2026-03-18 14:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 23:55:31]  *** The last 200 lines of the pilot log: ***
[2026-03-18 23:55:31] 2026-03-18 22:54:38,292 | INFO     | job 7057088484 has finished - writing final server update
[2026-03-18 23:55:31] 2026-03-18 22:54:38,292 | INFO     | total number of processed events: 400 (read)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,294 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-7057088484/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,295 | INFO     | extracted standard info from prmon json
[2026-03-18 23:55:31] 2026-03-18 22:54:38,295 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 23:55:31] 2026-03-18 22:54:38,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 23:55:31] 2026-03-18 22:54:38,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 23:55:31] 2026-03-18 22:54:38,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 23:55:31] 2026-03-18 22:54:38,308 | INFO     | fitting pss+swap vs Time
[2026-03-18 23:55:31] 2026-03-18 22:54:38,312 | INFO     | sum of square deviations: 55335296122.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,323 | INFO     | sum of deviations: 288210740639.99994
[2026-03-18 23:55:31] 2026-03-18 22:54:38,323 | INFO     | mean x: 1773857296.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,324 | INFO     | mean y: 2488439.5293072825
[2026-03-18 23:55:31] 2026-03-18 22:54:38,324 | INFO     | intersect: -9236546333.911959
[2026-03-18 23:55:31] 2026-03-18 22:54:38,325 | INFO     | chi2: 8.764926443497114
[2026-03-18 23:55:31] 2026-03-18 22:54:38,326 | INFO     | sum of square deviations: 53874050119.5
[2026-03-18 23:55:31] 2026-03-18 22:54:38,336 | INFO     | sum of deviations: 322524390459.49994
[2026-03-18 23:55:31] 2026-03-18 22:54:38,336 | INFO     | mean x: 1773857143.5
[2026-03-18 23:55:31] 2026-03-18 22:54:38,336 | INFO     | mean y: 2491992.417562724
[2026-03-18 23:55:31] 2026-03-18 22:54:38,336 | INFO     | intersect: -10616947101.182125
[2026-03-18 23:55:31] 2026-03-18 22:54:38,337 | INFO     | chi2: 8.030257581069066
[2026-03-18 23:55:31] 2026-03-18 22:54:38,337 | INFO     | current chi2=8.030257581069066 (change=8.381917032208692 %)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,337 | INFO     | right removable region: 557
[2026-03-18 23:55:31] 2026-03-18 22:54:38,338 | INFO     | sum of square deviations: 53874050119.5
[2026-03-18 23:55:31] 2026-03-18 22:54:38,348 | INFO     | sum of deviations: 86280175466.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,348 | INFO     | mean x: 1773857448.5
[2026-03-18 23:55:31] 2026-03-18 22:54:38,348 | INFO     | mean y: 2509507.6487455196
[2026-03-18 23:55:31] 2026-03-18 22:54:38,348 | INFO     | intersect: -2838352309.288501
[2026-03-18 23:55:31] 2026-03-18 22:54:38,349 | INFO     | chi2: 3.957872815942579
[2026-03-18 23:55:31] 2026-03-18 22:54:38,349 | INFO     | current chi2=3.957872815942579 (change=54.844198163476776 %)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,350 | INFO     | sum of square deviations: 52438758092.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,360 | INFO     | sum of deviations: -72302277884.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,360 | INFO     | mean x: 1773857601.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,360 | INFO     | mean y: 2526349.528028933
[2026-03-18 23:55:31] 2026-03-18 22:54:38,360 | INFO     | intersect: 2448311678.1800795
[2026-03-18 23:55:31] 2026-03-18 22:54:38,361 | INFO     | chi2: 1.0972145750059885
[2026-03-18 23:55:31] 2026-03-18 22:54:38,361 | INFO     | current chi2=1.0972145750059885 (change=72.27766969705712 %)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,362 | INFO     | sum of square deviations: 51029187477.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,371 | INFO     | sum of deviations: -104844290704.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,371 | INFO     | mean x: 1773857753.5
[2026-03-18 23:55:31] 2026-03-18 22:54:38,371 | INFO     | mean y: 2529862.562043796
[2026-03-18 23:55:31] 2026-03-18 22:54:38,372 | INFO     | intersect: 3647088343.1242356
[2026-03-18 23:55:31] 2026-03-18 22:54:38,372 | INFO     | chi2: 0.9448697416613436
[2026-03-18 23:55:31] 2026-03-18 22:54:38,373 | INFO     | current chi2=0.9448697416613436 (change=13.884689177029333 %)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,373 | INFO     | left removable region: 30
[2026-03-18 23:55:31] 2026-03-18 22:54:38,374 | INFO     | sum of square deviations: 45384620248.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,382 | INFO     | sum of deviations: -45873423374.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,382 | INFO     | mean x: 1773858028.0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,382 | INFO     | mean y: 2531333.3434535107
[2026-03-18 23:55:31] 2026-03-18 22:54:38,382 | INFO     | intersect: 1795494233.0913844
[2026-03-18 23:55:31] 2026-03-18 22:54:38,383 | INFO     | chi2: 0.13876831652746902
[2026-03-18 23:55:31] 2026-03-18 22:54:38,384 | INFO     | current memory leak: -1.01 B/s (using 527 data points, chi2=0.14)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,384 | INFO     | could have reported an average CPU frequency of 1999 MHz (23 samples)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | ..............................
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | . Timing measurements:
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | . get job = 0 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | . initial setup = 109 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | . payload setup = 174 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | . stage-in = 0 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | . payload execution = 34440 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,385 | INFO     | . stage-out = 4 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,386 | INFO     | . log creation = 2 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,386 | INFO     | ..............................
[2026-03-18 23:55:31] 2026-03-18 22:54:38,513 | INFO     | 
[2026-03-18 23:55:31] 2026-03-18 22:54:38,513 | INFO     | job summary report
[2026-03-18 23:55:31] 2026-03-18 22:54:38,513 | INFO     | --------------------------------------------------
[2026-03-18 23:55:31] 2026-03-18 22:54:38,513 | INFO     | PanDA job id: 7057088484
[2026-03-18 23:55:31] 2026-03-18 22:54:38,513 | INFO     | task id: 49176737
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | errors: (none)
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | pilot state: finished 
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | transexitcode: 0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | exeerrorcode: 0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | exeerrordiag: 
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | exitcode: 0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | exitmsg: OK
[2026-03-18 23:55:31] 2026-03-18 22:54:38,514 | INFO     | cpuconsumptiontime: 141599 s
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | nevents: 400
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | neventsw: 0
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | pid: 7825
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | pgrp: 7825
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | corecount: 8
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | event service: False
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | sizes: {0: 2279854, 1: 2280311, 2: 2280399, 12: 2280399, 34619: 2320407, 34624: 2329407, 34625: 2329591, 34626: 2329785}
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | --------------------------------------------------
[2026-03-18 23:55:31] 2026-03-18 22:54:38,515 | INFO     | 
[2026-03-18 23:55:31] 2026-03-18 22:54:38,516 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-03-18 23:55:31] 2026-03-18 22:54:38,756 | INFO     | time since job start (34638s) is within the limit (345600.0s)
[2026-03-18 23:55:31] 2026-03-18 22:54:39,032 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,032 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,032 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,032 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,032 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,032 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,034 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 23:55:31] 2026-03-18 22:54:39,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,034 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 23:55:31] 2026-03-18 22:54:39,034 | INFO     | job 7057088484 has completed (purged errors)
[2026-03-18 23:55:31] 2026-03-18 22:54:39,034 | INFO     | overall cleanup function is called
[2026-03-18 23:55:31] 2026-03-18 22:54:40,043 | INFO     | --- collectZombieJob: --- 10, [7825]
[2026-03-18 23:55:31] 2026-03-18 22:54:40,044 | INFO     | zombie collector waiting for pid 7825
[2026-03-18 23:55:31] 2026-03-18 22:54:40,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 23:55:31] 2026-03-18 22:54:40,044 | INFO     | collected zombie processes
[2026-03-18 23:55:31] 2026-03-18 22:54:40,044 | INFO     | will attempt to kill all subprocesses of pid=7825
[2026-03-18 23:55:31] 2026-03-18 22:54:40,127 | INFO     | process IDs to be killed: [7825] (in reverse order)
[2026-03-18 23:55:31] 2026-03-18 22:54:41,042 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 23:55:31] 2026-03-18 22:54:41,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 23:55:31] 2026-03-18 22:54:41,044 | INFO     | did not find any defunct processes belonging to 7825
[2026-03-18 23:55:31] 2026-03-18 22:54:41,045 | INFO     | did not find any defunct processes belonging to 7825
[2026-03-18 23:55:31] 2026-03-18 22:54:41,045 | INFO     | ready for new job
[2026-03-18 23:55:31] 2026-03-18 22:54:41,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 23:55:31] 2026-03-18 22:54:41,048 | INFO     | **************************************
[2026-03-18 23:55:31] 2026-03-18 22:54:41,048 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 23:55:31] 2026-03-18 22:54:41,048 | INFO     | **************************************
[2026-03-18 23:55:31] 2026-03-18 22:54:41,048 | INFO     | 
[2026-03-18 23:55:31] 2026-03-18 22:54:41,049 | INFO     | pilot is running in a VM
[2026-03-18 23:55:31] 2026-03-18 22:54:41,049 | INFO     | architecture information:
[2026-03-18 23:55:31] 2026-03-18 22:54:41,059 | INFO     | executing command: cat /etc/os-release
[2026-03-18 23:55:31] 2026-03-18 22:54:41,265 | INFO     | cat /etc/os-release:
[2026-03-18 23:55:31] NAME="CentOS Linux"
[2026-03-18 23:55:31] VERSION="7 (Core)"
[2026-03-18 23:55:31] ID="centos"
[2026-03-18 23:55:31] ID_LIKE="rhel fedora"
[2026-03-18 23:55:31] VERSION_ID="7"
[2026-03-18 23:55:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 23:55:31] ANSI_COLOR="0;31"
[2026-03-18 23:55:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 23:55:31] HOME_URL="https://www.centos.org/"
[2026-03-18 23:55:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 23:55:31] 
[2026-03-18 23:55:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 23:55:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 23:55:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 23:55:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 23:55:31] 
[2026-03-18 23:55:31] 2026-03-18 22:54:41,265 | INFO     | **************************************
[2026-03-18 23:55:31] 2026-03-18 22:54:41,769 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-03-18 23:55:31] 2026-03-18 22:54:41,935 | INFO     | sufficient remaining disk space (496727228416 B)
[2026-03-18 23:55:31] 2026-03-18 22:54:41,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 23:55:31] 2026-03-18 22:54:41,936 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 23:55:31] 2026-03-18 22:54:41,936 | INFO     | update_server=False
[2026-03-18 23:55:31] 2026-03-18 22:54:41,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 23:55:31] 2026-03-18 22:54:41,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 23:55:31] 2026-03-18 22:54:41,937 | INFO     | aborting loop
[2026-03-18 23:55:31] 2026-03-18 22:54:41,943 | INFO     | all payload control threads have been joined
[2026-03-18 23:55:31] 2026-03-18 22:54:42,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 23:55:31] 2026-03-18 22:54:42,417 | INFO     | all job control threads have been joined
[2026-03-18 23:55:31] 2026-03-18 22:54:42,941 | INFO     | [job] retrieve thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:42,942 | INFO     | [job] job monitor thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:42,949 | INFO     | [payload] control thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:43,001 | INFO     | all data control threads have been joined
[2026-03-18 23:55:31] 2026-03-18 22:54:43,077 | INFO     | [payload] failed_post thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:43,251 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:43,255 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:43,363 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:43,423 | INFO     | [job] control thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:43,469 | INFO     | [job] validate thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:43,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 23:55:31] 2026-03-18 22:54:43,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 23:55:31] 2026-03-18 22:54:43,721 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:44,008 | INFO     | [data] control thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:44,051 | INFO     | [data] copytool_in thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:44,075 | INFO     | [payload] validate_post thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:44,246 | INFO     | [data] copytool_out thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:44,533 | INFO     | [job] queue monitor thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:54:47,614 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 23:55:31] 2026-03-18 22:55:11,894 | INFO     | PID=3390 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-18 23:55:31] 2026-03-18 22:55:11,894 | INFO     | .. there are 2 such processes running
[2026-03-18 23:55:31] 2026-03-18 22:55:11,894 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 23:55:31] 2026-03-18 22:55:11,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 23:55:31] 2026-03-18 22:55:11,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 23:55:31] 2026-03-18 22:55:19,829 | INFO     | [monitor] cgroup control has ended
[2026-03-18 23:55:31] 2026-03-18 22:55:20,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140421469849408)>', '<ExcThread(monitor, started 140421170706176)>']
[2026-03-18 23:55:31] 2026-03-18 22:55:20,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 23:55:31] 2026-03-18 22:55:20,949 | INFO     | [monitor] control thread has ended
[2026-03-18 23:55:31] 2026-03-18 22:55:25,862 | INFO     | all workflow threads have been joined
[2026-03-18 23:55:31] 2026-03-18 22:55:25,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 23:55:31] 2026-03-18 22:55:25,863 | INFO     | traces error code: 0
[2026-03-18 23:55:31] 2026-03-18 22:55:25,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 23:55:31] 2026-03-18 22:55:26,306 [wrapper] ==== pilot stdout END ====
[2026-03-18 23:55:31] 2026-03-18 22:55:26,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 23:55:31] 2026-03-18 22:55:26,543 [wrapper] pilotpid: 3390
[2026-03-18 23:55:31] 2026-03-18 22:55:26,648 [wrapper] Pilot exit status: 0
[2026-03-18 23:55:31] 2026-03-18 22:55:27,158 [wrapper] pandaids: 7057088484
[2026-03-18 23:55:31] 2026-03-18 22:55:28,095 [wrapper] cleanup supervisor_pilot 31045 3391
[2026-03-18 23:55:31] 2026-03-18 22:55:28,187 [wrapper] Test setup, not cleaning
[2026-03-18 23:55:31] 2026-03-18 22:55:28,296 [wrapper] apfmon messages muted
[2026-03-18 23:55:31] 2026-03-18 22:55:28,418 [wrapper] ==== wrapper stdout END ====
[2026-03-18 23:55:31] 2026-03-18 22:55:28,504 [wrapper] ==== wrapper stderr END ====
[2026-03-18 23:55:31]  *** Error codes and diagnostics ***
[2026-03-18 23:55:31]     "exeErrorCode": 0,
[2026-03-18 23:55:31]     "exeErrorDiag": "",
[2026-03-18 23:55:31]     "pilotErrorCode": 0,
[2026-03-18 23:55:31]     "pilotErrorDiag": "",
[2026-03-18 23:55:31]  *** Listing of results directory ***
[2026-03-18 23:55:31] total 471568
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc    585013 Mar 17 01:55 pilot3.tar.gz
[2026-03-18 23:55:31] -rwx------. 1 boinc boinc     36322 Mar 17 01:57 runpilot2-wrapper.sh
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc      5111 Mar 17 01:58 queuedata.json
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc       100 Mar 18 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 23:55:31] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 14:11 run_atlas
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc       105 Mar 18 14:11 job.xml
[2026-03-18 23:55:31] -rw-r--r--. 2 boinc boinc 235538478 Mar 18 14:11 EVNT.49135042._000003.pool.root.1
[2026-03-18 23:55:31] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:11 start_atlas.sh
[2026-03-18 23:55:31] drwxrwx--x. 2 boinc boinc        68 Mar 18 14:11 shared
[2026-03-18 23:55:31] -rw-r--r--. 2 boinc boinc    597547 Mar 18 14:11 input.tar.gz
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc      6392 Mar 18 14:11 init_data.xml
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc         0 Mar 18 14:11 boinc_lockfile
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc      2649 Mar 18 14:11 pandaJob.out
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc       415 Mar 18 14:17 workernode_map.json
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc   1010909 Mar 18 14:17 agis_schedconf.cvmfs.json
[2026-03-18 23:55:31] drwx------. 5 boinc boinc      4096 Mar 18 14:17 pilot3
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc 232289986 Mar 18 23:52 HITS.49176737._000073.pool.root.1
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc       532 Mar 18 23:53 boinc_task_state.xml
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc        95 Mar 18 23:54 pilot_heartbeat.json
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc      1018 Mar 18 23:54 memory_monitor_summary.json
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc   1511579 Mar 18 23:54 agis_ddmendpoints.agis.ALL.json
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc    757790 Mar 18 23:54 log.49176737._000073.job.log.tgz.1
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc      6321 Mar 18 23:54 heartbeat.json
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc      8192 Mar 18 23:55 boinc_mmap_file
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc        29 Mar 18 23:55 wrapper_checkpoint.txt
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc      4880 Mar 18 23:55 pilotlog.txt
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc   4808223 Mar 18 23:55 log.49176737._000073.job.log.1
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc       357 Mar 18 23:55 output.list
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc       620 Mar 18 23:55 runtime_log
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc   5580800 Mar 18 23:55 result.tar.gz
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc      8832 Mar 18 23:55 runtime_log.err
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc       658 Mar 18 23:55 r9IKDmFvXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmHYwLDmGo4cQm.diag
[2026-03-18 23:55:31] -rw-r--r--. 1 boinc boinc     20729 Mar 18 23:55 stderr.txt
[2026-03-18 23:55:31] HITS file was successfully produced:
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc 232289986 Mar 18 23:52 shared/HITS.pool.root.1
[2026-03-18 23:55:31]  *** Contents of shared directory: ***
[2026-03-18 23:55:31] total 462920
[2026-03-18 23:55:31] -rw-r--r--. 2 boinc boinc 235538478 Mar 18 14:11 ATLAS.root_0
[2026-03-18 23:55:31] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:11 start_atlas.sh
[2026-03-18 23:55:31] -rw-r--r--. 2 boinc boinc    597547 Mar 18 14:11 input.tar.gz
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc 232289986 Mar 18 23:52 HITS.pool.root.1
[2026-03-18 23:55:31] -rw-------. 1 boinc boinc   5580800 Mar 18 23:55 result.tar.gz
23:55:33 (31817): run_atlas exited; CPU time 141978.418786
23:55:33 (31817): called boinc_finish(0)

</stderr_txt>
]]>

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