Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:08:58 (20203): wrapper (7.7.26015): starting
10:08:58 (20203): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 10:08:58] Arguments: --nthreads 8
[2026-03-18 10:08:58] Threads: 8
[2026-03-18 10:08:58] Checking for CVMFS
[2026-03-18 10:08:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 10:09:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 10:09:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 10:09:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 10:09:02] 2.11.2.0 1076 133138 107640 157408 3 105 13262946 25165824 4358 130560 154 50186780 99.821 40936398 1297 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 10:09:02] CVMFS is ok
[2026-03-18 10:09:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 10:09:02] Checking for apptainer binary...
[2026-03-18 10:09:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 10:09:02] Running /usr/bin/apptainer --version
[2026-03-18 10:09:02] apptainer version 1.3.2-1.el7
[2026-03-18 10:09:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 10:09:04] cg-vwn456.simple-grid.lan
[2026-03-18 10:09:04] apptainer works
[2026-03-18 10:09:04] Set ATHENA_PROC_NUMBER=8
[2026-03-18 10:09:04] Set ATHENA_CORE_NUMBER=8
[2026-03-18 10:09:04] Starting ATLAS job with PandaID=7057110396
[2026-03-18 10:09:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 21:02:45]  *** The last 200 lines of the pilot log: ***
[2026-03-18 21:02:45] 2026-03-18 20:02:03,595 | INFO     | log transfer has been attempted: DONE
[2026-03-18 21:02:45] 2026-03-18 20:02:03,595 | INFO     | job 7057110396 has finished - writing final server update
[2026-03-18 21:02:45] 2026-03-18 20:02:03,595 | INFO     | total number of processed events: 400 (read)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,597 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7057110396/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,598 | INFO     | extracted standard info from prmon json
[2026-03-18 21:02:45] 2026-03-18 20:02:03,598 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 21:02:45] 2026-03-18 20:02:03,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 21:02:45] 2026-03-18 20:02:03,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 21:02:45] 2026-03-18 20:02:03,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 21:02:45] 2026-03-18 20:02:03,609 | INFO     | fitting pss+swap vs Time
[2026-03-18 21:02:45] 2026-03-18 20:02:03,610 | INFO     | sum of square deviations: 79771672435.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,622 | INFO     | sum of deviations: -103645519009.00003
[2026-03-18 21:02:45] 2026-03-18 20:02:03,622 | INFO     | mean x: 1773844710.5
[2026-03-18 21:02:45] 2026-03-18 20:02:03,622 | INFO     | mean y: 2529543.4402515725
[2026-03-18 21:02:45] 2026-03-18 20:02:03,622 | INFO     | intersect: 2307245616.817658
[2026-03-18 21:02:45] 2026-03-18 20:02:03,623 | INFO     | chi2: 2.805207652146667
[2026-03-18 21:02:45] 2026-03-18 20:02:03,624 | INFO     | sum of square deviations: 77905014180.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,634 | INFO     | sum of deviations: -60065043789.00002
[2026-03-18 21:02:45] 2026-03-18 20:02:03,635 | INFO     | mean x: 1773844558.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,635 | INFO     | mean y: 2533081.5847860537
[2026-03-18 21:02:45] 2026-03-18 20:02:03,635 | INFO     | intersect: 1370173562.4012597
[2026-03-18 21:02:45] 2026-03-18 20:02:03,636 | INFO     | chi2: 2.0302491682045716
[2026-03-18 21:02:45] 2026-03-18 20:02:03,636 | INFO     | current chi2=2.0302491682045716 (change=27.625708326763743 %)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,637 | INFO     | sum of square deviations: 76067705312.5
[2026-03-18 21:02:45] 2026-03-18 20:02:03,648 | INFO     | sum of deviations: -59651387843.99999
[2026-03-18 21:02:45] 2026-03-18 20:02:03,648 | INFO     | mean x: 1773844405.5
[2026-03-18 21:02:45] 2026-03-18 20:02:03,648 | INFO     | mean y: 2533115.9201277955
[2026-03-18 21:02:45] 2026-03-18 20:02:03,648 | INFO     | intersect: 1393560756.0033138
[2026-03-18 21:02:45] 2026-03-18 20:02:03,649 | INFO     | chi2: 2.0299061614319354
[2026-03-18 21:02:45] 2026-03-18 20:02:03,649 | INFO     | current chi2=2.0299061614319354 (change=0.016894811632384318 %)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,649 | INFO     | right removable region: 625
[2026-03-18 21:02:45] 2026-03-18 20:02:03,650 | INFO     | sum of square deviations: 77905014180.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,661 | INFO     | sum of deviations: -214139910130.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,661 | INFO     | mean x: 1773844863.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,662 | INFO     | mean y: 2538540.9524564184
[2026-03-18 21:02:45] 2026-03-18 20:02:03,662 | INFO     | intersect: 4878360508.839327
[2026-03-18 21:02:45] 2026-03-18 20:02:03,662 | INFO     | chi2: 1.1582011437866249
[2026-03-18 21:02:45] 2026-03-18 20:02:03,663 | INFO     | current chi2=1.1582011437866249 (change=58.71246312549023 %)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,664 | INFO     | sum of square deviations: 76067705312.5
[2026-03-18 21:02:45] 2026-03-18 20:02:03,674 | INFO     | sum of deviations: -225444203210.00012
[2026-03-18 21:02:45] 2026-03-18 20:02:03,674 | INFO     | mean x: 1773845015.5
[2026-03-18 21:02:45] 2026-03-18 20:02:03,675 | INFO     | mean y: 2539479.166134185
[2026-03-18 21:02:45] 2026-03-18 20:02:03,675 | INFO     | intersect: 5259738634.767753
[2026-03-18 21:02:45] 2026-03-18 20:02:03,676 | INFO     | chi2: 1.136761236943055
[2026-03-18 21:02:45] 2026-03-18 20:02:03,676 | INFO     | current chi2=1.136761236943055 (change=1.8511384623118319 %)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,676 | INFO     | left removable region: 20
[2026-03-18 21:02:45] 2026-03-18 20:02:03,677 | INFO     | sum of square deviations: 68666254910.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,686 | INFO     | sum of deviations: -149376674462.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,687 | INFO     | mean x: 1773844985.0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,687 | INFO     | mean y: 2540595.3190082647
[2026-03-18 21:02:45] 2026-03-18 20:02:03,687 | INFO     | intersect: 3861365650.1831555
[2026-03-18 21:02:45] 2026-03-18 20:02:03,688 | INFO     | chi2: 0.329361296634249
[2026-03-18 21:02:45] 2026-03-18 20:02:03,688 | INFO     | current memory leak: -2.18 B/s (using 605 data points, chi2=0.33)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | could have reported an average CPU frequency of 2250 MHz (25 samples)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | ..............................
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | . Timing measurements:
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | . get job = 0 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | . initial setup = 60 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | . payload setup = 108 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | . stage-in = 0 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | . payload execution = 38854 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,689 | INFO     | . stage-out = 6 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,690 | INFO     | . log creation = 1 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,690 | INFO     | ..............................
[2026-03-18 21:02:45] 2026-03-18 20:02:03,794 | INFO     | 
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | job summary report
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | --------------------------------------------------
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | PanDA job id: 7057110396
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | task id: 49176283
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | errors: (none)
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | pilot state: finished 
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | transexitcode: 0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | exeerrorcode: 0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,795 | INFO     | exeerrordiag: 
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | exitcode: 0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | exitmsg: OK
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | cpuconsumptiontime: 145910 s
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | nevents: 400
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | neventsw: 0
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | pid: 29434
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | pgrp: 29434
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | corecount: 8
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | event service: False
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | sizes: {0: 2280241, 1: 2280329, 38966: 2322223, 38973: 2331277, 38974: 2331479}
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | --------------------------------------------------
[2026-03-18 21:02:45] 2026-03-18 20:02:03,796 | INFO     | 
[2026-03-18 21:02:45] 2026-03-18 20:02:03,797 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-18 21:02:45] 2026-03-18 20:02:04,092 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,092 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,092 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | job 7057110396 has completed (purged errors)
[2026-03-18 21:02:45] 2026-03-18 20:02:04,094 | INFO     | overall cleanup function is called
[2026-03-18 21:02:45] 2026-03-18 20:02:05,102 | INFO     | --- collectZombieJob: --- 10, [29434]
[2026-03-18 21:02:45] 2026-03-18 20:02:05,103 | INFO     | zombie collector waiting for pid 29434
[2026-03-18 21:02:45] 2026-03-18 20:02:05,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 21:02:45] 2026-03-18 20:02:05,103 | INFO     | collected zombie processes
[2026-03-18 21:02:45] 2026-03-18 20:02:05,103 | INFO     | will attempt to kill all subprocesses of pid=29434
[2026-03-18 21:02:45] 2026-03-18 20:02:05,212 | INFO     | process IDs to be killed: [29434] (in reverse order)
[2026-03-18 21:02:45] 2026-03-18 20:02:05,881 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 21:02:45] 2026-03-18 20:02:05,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 21:02:45] 2026-03-18 20:02:05,884 | INFO     | did not find any defunct processes belonging to 29434
[2026-03-18 21:02:45] 2026-03-18 20:02:05,887 | INFO     | did not find any defunct processes belonging to 29434
[2026-03-18 21:02:45] 2026-03-18 20:02:05,887 | INFO     | ready for new job
[2026-03-18 21:02:45] 2026-03-18 20:02:05,887 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 21:02:45] 2026-03-18 20:02:05,890 | INFO     | **************************************
[2026-03-18 21:02:45] 2026-03-18 20:02:05,890 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 21:02:45] 2026-03-18 20:02:05,891 | INFO     | **************************************
[2026-03-18 21:02:45] 2026-03-18 20:02:05,891 | INFO     | 
[2026-03-18 21:02:45] 2026-03-18 20:02:05,891 | INFO     | pilot is running in a VM
[2026-03-18 21:02:45] 2026-03-18 20:02:05,891 | INFO     | architecture information:
[2026-03-18 21:02:45] 2026-03-18 20:02:05,892 | INFO     | executing command: cat /etc/os-release
[2026-03-18 21:02:45] 2026-03-18 20:02:06,002 | INFO     | cat /etc/os-release:
[2026-03-18 21:02:45] NAME="CentOS Linux"
[2026-03-18 21:02:45] VERSION="7 (Core)"
[2026-03-18 21:02:45] ID="centos"
[2026-03-18 21:02:45] ID_LIKE="rhel fedora"
[2026-03-18 21:02:45] VERSION_ID="7"
[2026-03-18 21:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 21:02:45] ANSI_COLOR="0;31"
[2026-03-18 21:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 21:02:45] HOME_URL="https://www.centos.org/"
[2026-03-18 21:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 21:02:45] 
[2026-03-18 21:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 21:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 21:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 21:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 21:02:45] 
[2026-03-18 21:02:45] 2026-03-18 20:02:06,003 | INFO     | **************************************
[2026-03-18 21:02:45] 2026-03-18 20:02:06,506 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-18 21:02:45] 2026-03-18 20:02:06,560 | INFO     | sufficient remaining disk space (495391342592 B)
[2026-03-18 21:02:45] 2026-03-18 20:02:06,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 21:02:45] 2026-03-18 20:02:06,561 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 21:02:45] 2026-03-18 20:02:06,561 | INFO     | update_server=False
[2026-03-18 21:02:45] 2026-03-18 20:02:06,561 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 21:02:45] 2026-03-18 20:02:06,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 21:02:45] 2026-03-18 20:02:06,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:02:45] 2026-03-18 20:02:06,564 | INFO     | aborting loop
[2026-03-18 21:02:45] 2026-03-18 20:02:06,604 | INFO     | all payload control threads have been joined
[2026-03-18 21:02:45] 2026-03-18 20:02:07,145 | INFO     | all data control threads have been joined
[2026-03-18 21:02:45] 2026-03-18 20:02:07,459 | INFO     | all job control threads have been joined
[2026-03-18 21:02:45] 2026-03-18 20:02:07,566 | INFO     | [job] retrieve thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:07,569 | INFO     | [job] job monitor thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:07,610 | INFO     | [payload] control thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:07,724 | INFO     | [data] copytool_in thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:07,831 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,150 | INFO     | [data] control thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,241 | INFO     | [payload] failed_post thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,465 | INFO     | [job] control thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,523 | INFO     | [job] validate thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,569 | INFO     | [data] copytool_out thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,609 | INFO     | [payload] validate_post thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:08,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 21:02:45] 2026-03-18 20:02:08,821 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:09,044 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:09,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 21:02:45] 2026-03-18 20:02:09,815 | INFO     | [job] queue monitor thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:13,610 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 21:02:45] 2026-03-18 20:02:35,978 | INFO     | [monitor] cgroup control has ended
[2026-03-18 21:02:45] 2026-03-18 20:02:36,459 | INFO     | PID=24678 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 21:02:45] 2026-03-18 20:02:36,459 | INFO     | .. there are 9 such processes running
[2026-03-18 21:02:45] 2026-03-18 20:02:36,461 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 21:02:45] 2026-03-18 20:02:36,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 21:02:45] 2026-03-18 20:02:36,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 21:02:45] 2026-03-18 20:02:37,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140672935987008)>', '<ExcThread(monitor, started 140672501794560)>']
[2026-03-18 21:02:45] 2026-03-18 20:02:38,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 21:02:45] 2026-03-18 20:02:38,473 | INFO     | [monitor] control thread has ended
[2026-03-18 21:02:45] 2026-03-18 20:02:42,725 | INFO     | all workflow threads have been joined
[2026-03-18 21:02:45] 2026-03-18 20:02:42,726 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 21:02:45] 2026-03-18 20:02:42,726 | INFO     | traces error code: 0
[2026-03-18 21:02:45] 2026-03-18 20:02:42,726 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 21:02:45] 2026-03-18 20:02:43,052 [wrapper] ==== pilot stdout END ====
[2026-03-18 21:02:45] 2026-03-18 20:02:43,163 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 21:02:45] 2026-03-18 20:02:43,249 [wrapper] pilotpid: 24678
[2026-03-18 21:02:45] 2026-03-18 20:02:43,291 [wrapper] Pilot exit status: 0
[2026-03-18 21:02:45] 2026-03-18 20:02:43,667 [wrapper] pandaids: 7057110396
[2026-03-18 21:02:45] 2026-03-18 20:02:43,960 [wrapper] cleanup supervisor_pilot 12025 24679
[2026-03-18 21:02:45] 2026-03-18 20:02:44,037 [wrapper] Test setup, not cleaning
[2026-03-18 21:02:45] 2026-03-18 20:02:44,120 [wrapper] apfmon messages muted
[2026-03-18 21:02:45] 2026-03-18 20:02:44,215 [wrapper] ==== wrapper stdout END ====
[2026-03-18 21:02:45] 2026-03-18 20:02:44,331 [wrapper] ==== wrapper stderr END ====
[2026-03-18 21:02:45]  *** Error codes and diagnostics ***
[2026-03-18 21:02:45]     "exeErrorCode": 0,
[2026-03-18 21:02:45]     "exeErrorDiag": "",
[2026-03-18 21:02:45]     "pilotErrorCode": 0,
[2026-03-18 21:02:45]     "pilotErrorDiag": "",
[2026-03-18 21:02:45]  *** Listing of results directory ***
[2026-03-18 21:02:45] total 480600
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc    585013 Mar 17 01:55 pilot3.tar.gz
[2026-03-18 21:02:45] -rwx------. 1 boinc boinc     36322 Mar 17 01:56 runpilot2-wrapper.sh
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc      5111 Mar 17 01:56 queuedata.json
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc       100 Mar 18 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 21:02:45] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 10:08 run_atlas
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc       105 Mar 18 10:08 job.xml
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc      6391 Mar 18 10:08 init_data.xml
[2026-03-18 21:02:45] -rw-r--r--. 2 boinc boinc 240350204 Mar 18 10:08 EVNT.49133333._000006.pool.root.1
[2026-03-18 21:02:45] -rw-r--r--. 2 boinc boinc     15845 Mar 18 10:08 start_atlas.sh
[2026-03-18 21:02:45] drwxrwx--x. 2 boinc boinc        68 Mar 18 10:08 shared
[2026-03-18 21:02:45] -rw-r--r--. 2 boinc boinc    597537 Mar 18 10:08 input.tar.gz
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc         0 Mar 18 10:08 boinc_lockfile
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc      2614 Mar 18 10:09 pandaJob.out
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc   1011579 Mar 18 10:11 agis_schedconf.cvmfs.json
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc       413 Mar 18 10:12 workernode_map.json
[2026-03-18 21:02:45] drwx------. 5 boinc boinc      4096 Mar 18 10:12 pilot3
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc 235520224 Mar 18 21:01 HITS.49176283._000148.pool.root.1
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc       532 Mar 18 21:01 boinc_task_state.xml
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc      1031 Mar 18 21:01 memory_monitor_summary.json
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc   1511579 Mar 18 21:02 agis_ddmendpoints.agis.ALL.json
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc    809315 Mar 18 21:02 log.49176283._000148.job.log.tgz.1
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc      6320 Mar 18 21:02 heartbeat.json
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc        95 Mar 18 21:02 pilot_heartbeat.json
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc      8192 Mar 18 21:02 boinc_mmap_file
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc        29 Mar 18 21:02 wrapper_checkpoint.txt
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc      4880 Mar 18 21:02 pilotlog.txt
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc   5361440 Mar 18 21:02 log.49176283._000148.job.log.1
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc       357 Mar 18 21:02 output.list
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc       620 Mar 18 21:02 runtime_log
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc   6184960 Mar 18 21:02 result.tar.gz
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc      8816 Mar 18 21:02 runtime_log.err
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc       658 Mar 18 21:02 cTANDmXuXM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDSwLDmMHgO7m.diag
[2026-03-18 21:02:45] -rw-r--r--. 1 boinc boinc     20623 Mar 18 21:02 stderr.txt
[2026-03-18 21:02:45] HITS file was successfully produced:
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc 235520224 Mar 18 21:01 shared/HITS.pool.root.1
[2026-03-18 21:02:45]  *** Contents of shared directory: ***
[2026-03-18 21:02:45] total 471364
[2026-03-18 21:02:45] -rw-r--r--. 2 boinc boinc 240350204 Mar 18 10:08 ATLAS.root_0
[2026-03-18 21:02:45] -rw-r--r--. 2 boinc boinc     15845 Mar 18 10:08 start_atlas.sh
[2026-03-18 21:02:45] -rw-r--r--. 2 boinc boinc    597537 Mar 18 10:08 input.tar.gz
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc 235520224 Mar 18 21:01 HITS.pool.root.1
[2026-03-18 21:02:45] -rw-------. 1 boinc boinc   6184960 Mar 18 21:02 result.tar.gz
21:02:47 (20203): run_atlas exited; CPU time 146471.035291
21:02:47 (20203): called boinc_finish(0)

</stderr_txt>
]]>

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