Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
20:08:49 (1469646): wrapper (7.7.26015): starting
20:08:49 (1469646): wrapper: running run_atlas (--nthreads 4)
[2026-03-16 20:08:49] Arguments: --nthreads 4
[2026-03-16 20:08:49] Threads: 4
[2026-03-16 20:08:49] Checking for CVMFS
[2026-03-16 20:08:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 20:08:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 20:08:50] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 20:08:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 20:08:50] 2.13.3.0 1101998 2086 56660 157351 3 228 3906300 4096001 2541 130560 0 736902 99.344 329852 1626 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-03-16 20:08:50] CVMFS is ok
[2026-03-16 20:08:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 20:08:50] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-16 20:08:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-16 20:08:50] Further information can be found at the LHC@home message board.
[2026-03-16 20:08:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 20:08:50] Checking for apptainer binary...
[2026-03-16 20:08:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 20:08:50] Running /usr/bin/apptainer --version
[2026-03-16 20:08:50] apptainer version 1.4.5
[2026-03-16 20:08:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 20:08:50] P9X79
[2026-03-16 20:08:50] apptainer works
[2026-03-16 20:08:50] Set ATHENA_PROC_NUMBER=4
[2026-03-16 20:08:50] Set ATHENA_CORE_NUMBER=4
[2026-03-16 20:08:50] Starting ATLAS job with PandaID=7056975437
[2026-03-16 20:08:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 06:55:13]  *** The last 200 lines of the pilot log: ***
[2026-03-17 06:55:13] 2026-03-17 10:54:41,742 | INFO     | preparing for final server update for job 7056975437 in state='finished'
[2026-03-17 06:55:13] 2026-03-17 10:54:41,743 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7056975437/jobReport.json
[2026-03-17 06:55:13] 2026-03-17 10:54:41,746 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/3/workernode_map.json
[2026-03-17 06:55:13] 2026-03-17 10:54:41,746 | INFO     | this job has now completed (state=finished)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,746 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,746 | INFO     | log transfer has been attempted: DONE
[2026-03-17 06:55:13] 2026-03-17 10:54:41,747 | INFO     | job 7056975437 has finished - writing final server update
[2026-03-17 06:55:13] 2026-03-17 10:54:41,747 | INFO     | total number of processed events: 400 (read)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,752 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7056975437/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,752 | INFO     | extracted standard info from prmon json
[2026-03-17 06:55:13] 2026-03-17 10:54:41,753 | INFO     | extracted standard memory fields from prmon json
[2026-03-17 06:55:13] 2026-03-17 10:54:41,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 06:55:13] 2026-03-17 10:54:41,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 06:55:13] 2026-03-17 10:54:41,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 06:55:13] 2026-03-17 10:54:41,769 | INFO     | fitting pss+swap vs Time
[2026-03-17 06:55:13] 2026-03-17 10:54:41,770 | INFO     | sum of square deviations: 79395981670.0
[2026-03-17 06:55:13] 2026-03-17 10:54:41,782 | INFO     | sum of deviations: -672323006064.0004
[2026-03-17 06:55:13] 2026-03-17 10:54:41,782 | INFO     | mean x: 1773725496.0
[2026-03-17 06:55:13] 2026-03-17 10:54:41,782 | INFO     | mean y: 2450781.818897638
[2026-03-17 06:55:13] 2026-03-17 10:54:41,782 | INFO     | intersect: 15022309876.95086
[2026-03-17 06:55:13] 2026-03-17 10:54:41,783 | INFO     | chi2: 2.775132748436808
[2026-03-17 06:55:13] 2026-03-17 10:54:41,784 | INFO     | sum of square deviations: 77535211897.5
[2026-03-17 06:55:13] 2026-03-17 10:54:41,796 | INFO     | sum of deviations: -665633388634.4999
[2026-03-17 06:55:13] 2026-03-17 10:54:41,796 | INFO     | mean x: 1773725343.5
[2026-03-17 06:55:13] 2026-03-17 10:54:41,797 | INFO     | mean y: 2451330.0841269842
[2026-03-17 06:55:13] 2026-03-17 10:54:41,797 | INFO     | intersect: 15229736869.222063
[2026-03-17 06:55:13] 2026-03-17 10:54:41,798 | INFO     | chi2: 2.765884889694315
[2026-03-17 06:55:13] 2026-03-17 10:54:41,798 | INFO     | current chi2=2.765884889694315 (change=0.3332402295962989 %)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,798 | INFO     | right removable region: 629
[2026-03-17 06:55:13] 2026-03-17 10:54:41,799 | INFO     | sum of square deviations: 77535211897.5
[2026-03-17 06:55:13] 2026-03-17 10:54:41,811 | INFO     | sum of deviations: -750906035854.0001
[2026-03-17 06:55:13] 2026-03-17 10:54:41,811 | INFO     | mean x: 1773725648.5
[2026-03-17 06:55:13] 2026-03-17 10:54:41,811 | INFO     | mean y: 2457191.4317460316
[2026-03-17 06:55:13] 2026-03-17 10:54:41,811 | INFO     | intersect: 17180475575.7556
[2026-03-17 06:55:13] 2026-03-17 10:54:41,812 | INFO     | chi2: 1.41928822561763
[2026-03-17 06:55:13] 2026-03-17 10:54:41,812 | INFO     | current chi2=1.41928822561763 (change=48.856924901445 %)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,813 | INFO     | sum of square deviations: 75703745000.0
[2026-03-17 06:55:13] 2026-03-17 10:54:41,824 | INFO     | sum of deviations: -739430691210.0001
[2026-03-17 06:55:13] 2026-03-17 10:54:41,825 | INFO     | mean x: 1773725801.0
[2026-03-17 06:55:13] 2026-03-17 10:54:41,825 | INFO     | mean y: 2456235.872
[2026-03-17 06:55:13] 2026-03-17 10:54:41,825 | INFO     | intersect: 17327190897.947716
[2026-03-17 06:55:13] 2026-03-17 10:54:41,826 | INFO     | chi2: 1.4160744675041572
[2026-03-17 06:55:13] 2026-03-17 10:54:41,826 | INFO     | current chi2=1.4160744675041572 (change=0.22643449409821392 %)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,826 | INFO     | left removable region: 20
[2026-03-17 06:55:13] 2026-03-17 10:54:41,827 | INFO     | sum of square deviations: 70037257360.0
[2026-03-17 06:55:13] 2026-03-17 10:54:41,838 | INFO     | sum of deviations: -682159981171.0001
[2026-03-17 06:55:13] 2026-03-17 10:54:41,838 | INFO     | mean x: 1773725923.0
[2026-03-17 06:55:13] 2026-03-17 10:54:41,838 | INFO     | mean y: 2452711.6962233167
[2026-03-17 06:55:13] 2026-03-17 10:54:41,838 | INFO     | intersect: 17278469618.195415
[2026-03-17 06:55:13] 2026-03-17 10:54:41,839 | INFO     | chi2: 1.392456372850348
[2026-03-17 06:55:13] 2026-03-17 10:54:41,839 | INFO     | current memory leak: -9.74 B/s (using 609 data points, chi2=1.39)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,840 | INFO     | could have reported an average CPU frequency of 2774 MHz (25 samples)
[2026-03-17 06:55:13] 2026-03-17 10:54:41,840 | INFO     | ..............................
[2026-03-17 06:55:13] 2026-03-17 10:54:41,840 | INFO     | . Timing measurements:
[2026-03-17 06:55:13] 2026-03-17 10:54:41,841 | INFO     | . get job = 0 s
[2026-03-17 06:55:13] 2026-03-17 10:54:41,841 | INFO     | . initial setup = 6 s
[2026-03-17 06:55:13] 2026-03-17 10:54:41,841 | INFO     | . payload setup = 5 s
[2026-03-17 06:55:13] 2026-03-17 10:54:41,841 | INFO     | . stage-in = 0 s
[2026-03-17 06:55:13] 2026-03-17 10:54:41,841 | INFO     | . payload execution = 38717 s
[2026-03-17 06:55:13] 2026-03-17 10:54:41,841 | INFO     | . stage-out = 3 s
[2026-03-17 06:55:13] 2026-03-17 10:54:41,842 | INFO     | . log creation = 0 s
[2026-03-17 06:55:13] 2026-03-17 10:54:41,842 | INFO     | ..............................
[2026-03-17 06:55:13] 2026-03-17 10:54:42,224 | INFO     | 
[2026-03-17 06:55:13] 2026-03-17 10:54:42,224 | INFO     | job summary report
[2026-03-17 06:55:13] 2026-03-17 10:54:42,224 | INFO     | --------------------------------------------------
[2026-03-17 06:55:13] 2026-03-17 10:54:42,224 | INFO     | PanDA job id: 7056975437
[2026-03-17 06:55:13] 2026-03-17 10:54:42,224 | INFO     | task id: 49181388
[2026-03-17 06:55:13] 2026-03-17 10:54:42,225 | INFO     | errors: (none)
[2026-03-17 06:55:13] 2026-03-17 10:54:42,225 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 06:55:13] 2026-03-17 10:54:42,225 | INFO     | pilot state: finished 
[2026-03-17 06:55:13] 2026-03-17 10:54:42,225 | INFO     | transexitcode: 0
[2026-03-17 06:55:13] 2026-03-17 10:54:42,225 | INFO     | exeerrorcode: 0
[2026-03-17 06:55:13] 2026-03-17 10:54:42,225 | INFO     | exeerrordiag: 
[2026-03-17 06:55:13] 2026-03-17 10:54:42,226 | INFO     | exitcode: 0
[2026-03-17 06:55:13] 2026-03-17 10:54:42,226 | INFO     | exitmsg: OK
[2026-03-17 06:55:13] 2026-03-17 10:54:42,226 | INFO     | cpuconsumptiontime: 152296 s
[2026-03-17 06:55:13] 2026-03-17 10:54:42,226 | INFO     | nevents: 400
[2026-03-17 06:55:13] 2026-03-17 10:54:42,226 | INFO     | neventsw: 0
[2026-03-17 06:55:13] 2026-03-17 10:54:42,226 | INFO     | pid: 1478365
[2026-03-17 06:55:13] 2026-03-17 10:54:42,226 | INFO     | pgrp: 1478365
[2026-03-17 06:55:13] 2026-03-17 10:54:42,227 | INFO     | corecount: 4
[2026-03-17 06:55:13] 2026-03-17 10:54:42,227 | INFO     | event service: False
[2026-03-17 06:55:13] 2026-03-17 10:54:42,227 | INFO     | sizes: {0: 2279213, 1: 2280139, 2: 2280373, 38725: 2322520, 38726: 2322519, 38729: 2331601, 38730: 2331785, 38732: 2332043}
[2026-03-17 06:55:13] 2026-03-17 10:54:42,227 | INFO     | --------------------------------------------------
[2026-03-17 06:55:13] 2026-03-17 10:54:42,227 | INFO     | 
[2026-03-17 06:55:13] 2026-03-17 10:54:42,227 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-17 06:55:13] 2026-03-17 10:54:42,244 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,245 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,247 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 06:55:13] 2026-03-17 10:54:42,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,248 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 06:55:13] 2026-03-17 10:54:42,248 | INFO     | job 7056975437 has completed (purged errors)
[2026-03-17 06:55:13] 2026-03-17 10:54:42,248 | INFO     | overall cleanup function is called
[2026-03-17 06:55:13] 2026-03-17 10:54:43,255 | INFO     | --- collectZombieJob: --- 10, [1478365]
[2026-03-17 06:55:13] 2026-03-17 10:54:43,255 | INFO     | zombie collector waiting for pid 1478365
[2026-03-17 06:55:13] 2026-03-17 10:54:43,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 06:55:13] 2026-03-17 10:54:43,255 | INFO     | collected zombie processes
[2026-03-17 06:55:13] 2026-03-17 10:54:43,255 | INFO     | will attempt to kill all subprocesses of pid=1478365
[2026-03-17 06:55:13] 2026-03-17 10:54:43,513 | INFO     | process IDs to be killed: [1478365] (in reverse order)
[2026-03-17 06:55:13] 2026-03-17 10:54:43,580 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 06:55:13] 2026-03-17 10:54:43,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 06:55:13] 2026-03-17 10:54:43,588 | INFO     | did not find any defunct processes belonging to 1478365
[2026-03-17 06:55:13] 2026-03-17 10:54:43,595 | INFO     | did not find any defunct processes belonging to 1478365
[2026-03-17 06:55:13] 2026-03-17 10:54:43,595 | INFO     | ready for new job
[2026-03-17 06:55:13] 2026-03-17 10:54:43,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 06:55:13] 2026-03-17 10:54:43,598 | INFO     | **************************************
[2026-03-17 06:55:13] 2026-03-17 10:54:43,599 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 06:55:13] 2026-03-17 10:54:43,599 | INFO     | **************************************
[2026-03-17 06:55:13] 2026-03-17 10:54:43,599 | INFO     | 
[2026-03-17 06:55:13] 2026-03-17 10:54:43,601 | INFO     | architecture information:
[2026-03-17 06:55:13] 2026-03-17 10:54:43,601 | INFO     | executing command: cat /etc/os-release
[2026-03-17 06:55:13] 2026-03-17 10:54:43,613 | INFO     | cat /etc/os-release:
[2026-03-17 06:55:13] NAME="CentOS Linux"
[2026-03-17 06:55:13] VERSION="7 (Core)"
[2026-03-17 06:55:13] ID="centos"
[2026-03-17 06:55:13] ID_LIKE="rhel fedora"
[2026-03-17 06:55:13] VERSION_ID="7"
[2026-03-17 06:55:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 06:55:13] ANSI_COLOR="0;31"
[2026-03-17 06:55:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 06:55:13] HOME_URL="https://www.centos.org/"
[2026-03-17 06:55:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 06:55:13] 
[2026-03-17 06:55:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 06:55:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 06:55:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 06:55:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 06:55:13] 
[2026-03-17 06:55:13] 2026-03-17 10:54:43,613 | INFO     | **************************************
[2026-03-17 06:55:13] 2026-03-17 10:54:44,116 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-17 06:55:13] 2026-03-17 10:54:44,129 | INFO     | sufficient remaining disk space (75980865536 B)
[2026-03-17 06:55:13] 2026-03-17 10:54:44,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 06:55:13] 2026-03-17 10:54:44,130 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 06:55:13] 2026-03-17 10:54:44,130 | INFO     | update_server=False
[2026-03-17 06:55:13] 2026-03-17 10:54:44,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 06:55:13] 2026-03-17 10:54:44,216 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 06:55:13] 2026-03-17 10:54:44,217 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 06:55:13] 2026-03-17 10:54:44,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 06:55:13] 2026-03-17 10:54:44,217 | INFO     | will abort loop
[2026-03-17 06:55:13] 2026-03-17 10:54:44,645 | INFO     | all data control threads have been joined
[2026-03-17 06:55:13] 2026-03-17 10:54:44,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 06:55:13] 2026-03-17 10:54:45,136 | INFO     | [job] retrieve thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:45,192 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:45,223 | INFO     | [job] job monitor thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:45,380 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 06:55:13] 2026-03-17 10:54:45,449 | INFO     | all job control threads have been joined
[2026-03-17 06:55:13] 2026-03-17 10:54:45,488 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:45,542 | INFO     | all payload control threads have been joined
[2026-03-17 06:55:13] 2026-03-17 10:54:45,650 | INFO     | [data] control thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:45,816 | INFO     | [data] copytool_in thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:45,846 | INFO     | [payload] failed_post thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:46,298 | INFO     | [job] validate thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:46,454 | INFO     | [job] control thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:46,455 | INFO     | [payload] validate_post thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:46,548 | INFO     | [payload] control thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:46,577 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:46,744 | INFO     | [data] copytool_out thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:46,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 06:55:13] 2026-03-17 10:54:47,994 | INFO     | [job] queue monitor thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:49,384 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:54:54,870 | INFO     | job.realtimelogging is not enabled
[2026-03-17 06:55:13] 2026-03-17 10:54:55,875 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 06:55:13] 2026-03-17 10:55:04,897 | INFO     | [monitor] cgroup control has ended
[2026-03-17 06:55:13] 2026-03-17 10:55:06,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537844426560)>', '<ExcThread(monitor, started 140537319364352)>']
[2026-03-17 06:55:13] 2026-03-17 10:55:11,799 | INFO     | all workflow threads have been joined
[2026-03-17 06:55:13] 2026-03-17 10:55:11,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 06:55:13] 2026-03-17 10:55:11,800 | INFO     | traces error code: 0
[2026-03-17 06:55:13] 2026-03-17 10:55:11,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 06:55:13] 2026-03-17 10:55:13,609 | INFO     | PID=1473820 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 06:55:13] 2026-03-17 10:55:13,609 | INFO     | .. there are 4 such processes running
[2026-03-17 06:55:13] 2026-03-17 10:55:13,610 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 06:55:13] 2026-03-17 10:55:13,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 06:55:13] 2026-03-17 10:55:13,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 06:55:13] 2026-03-17 10:55:13,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 06:55:13] 2026-03-17 10:55:13,611 | INFO     | [monitor] control thread has ended
[2026-03-17 06:55:13] 2026-03-17 10:55:13,704 [wrapper] ==== pilot stdout END ====
[2026-03-17 06:55:13] 2026-03-17 10:55:13,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 06:55:13] 2026-03-17 10:55:13,709 [wrapper] pilotpid: 1473820
[2026-03-17 06:55:13] 2026-03-17 10:55:13,711 [wrapper] Pilot exit status: 0
[2026-03-17 06:55:13] 2026-03-17 10:55:13,720 [wrapper] pandaids: 7056975437
[2026-03-17 06:55:13] 2026-03-17 10:55:13,761 [wrapper] cleanup supervisor_pilot 1555543 1473821
[2026-03-17 06:55:13] 2026-03-17 10:55:13,764 [wrapper] Test setup, not cleaning
[2026-03-17 06:55:13] 2026-03-17 10:55:13,767 [wrapper] apfmon messages muted
[2026-03-17 06:55:13] 2026-03-17 10:55:13,769 [wrapper] ==== wrapper stdout END ====
[2026-03-17 06:55:13] 2026-03-17 10:55:13,772 [wrapper] ==== wrapper stderr END ====
[2026-03-17 06:55:13]  *** Error codes and diagnostics ***
[2026-03-17 06:55:13]     "exeErrorCode": 0,
[2026-03-17 06:55:13]     "exeErrorDiag": "",
[2026-03-17 06:55:13]     "pilotErrorCode": 0,
[2026-03-17 06:55:13]     "pilotErrorDiag": "",
[2026-03-17 06:55:13]  *** Listing of results directory ***
[2026-03-17 06:55:13] total 492076
[2026-03-17 06:55:13] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 16 13:24 pilot3.tar.gz
[2026-03-17 06:55:13] -rwx------ 1 whitlerd whitlerd     36322 Mar 16 13:27 runpilot2-wrapper.sh
[2026-03-17 06:55:13] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 16 13:29 queuedata.json
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 16 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 06:55:13] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 16 20:08 run_atlas
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 16 20:08 job.xml
[2026-03-17 06:55:13] -rw-r--r-- 2 whitlerd whitlerd 243164973 Mar 16 20:08 EVNT.49134998._000016.pool.root.1
[2026-03-17 06:55:13] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 16 20:08 start_atlas.sh
[2026-03-17 06:55:13] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 16 20:08 shared
[2026-03-17 06:55:13] -rw-r--r-- 2 whitlerd whitlerd    597542 Mar 16 20:08 input.tar.gz
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd      8882 Mar 16 20:08 init_data.xml
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 16 20:08 boinc_setup_complete
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 16 20:08 boinc_lockfile
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd      2613 Mar 16 20:08 pandaJob.out
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd   1006429 Mar 16 20:09 agis_schedconf.cvmfs.json
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd       418 Mar 16 20:09 workernode_map.json
[2026-03-17 06:55:13] drwx------ 5 whitlerd whitlerd      4096 Mar 16 20:09 pilot3
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd       531 Mar 17 06:53 boinc_task_state.xml
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd 244425428 Mar 17 06:53 HITS.49181388._000380.pool.root.1
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd      1032 Mar 17 06:54 memory_monitor_summary.json
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd   1511579 Mar 17 06:54 agis_ddmendpoints.agis.ALL.json
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd    726512 Mar 17 06:54 log.49181388._000380.job.log.tgz.1
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd      6317 Mar 17 06:54 heartbeat.json
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd        29 Mar 17 06:55 wrapper_checkpoint.txt
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd        95 Mar 17 06:55 pilot_heartbeat.json
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd       822 Mar 17 06:55 pilotlog.txt
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd   5451674 Mar 17 06:55 log.49181388._000380.job.log.1
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd       357 Mar 17 06:55 output.list
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 17 06:55 runtime_log
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd   6195200 Mar 17 06:55 result.tar.gz
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd      8985 Mar 17 06:55 runtime_log.err
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd       648 Mar 17 06:55 jt6KDmKuQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmooyLDmkinIPm.diag
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd     21394 Mar 17 06:55 stderr.txt
[2026-03-17 06:55:13] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 17 06:55 boinc_mmap_file
[2026-03-17 06:55:13] HITS file was successfully produced:
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd 244425428 Mar 17 06:53 shared/HITS.pool.root.1
[2026-03-17 06:55:13]  *** Contents of shared directory: ***
[2026-03-17 06:55:13] total 482828
[2026-03-17 06:55:13] -rw-r--r-- 2 whitlerd whitlerd 243164973 Mar 16 20:08 ATLAS.root_0
[2026-03-17 06:55:13] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 16 20:08 start_atlas.sh
[2026-03-17 06:55:13] -rw-r--r-- 2 whitlerd whitlerd    597542 Mar 16 20:08 input.tar.gz
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd 244425428 Mar 17 06:53 HITS.pool.root.1
[2026-03-17 06:55:13] -rw------- 1 whitlerd whitlerd   6195200 Mar 17 06:55 result.tar.gz
06:55:15 (1469646): run_atlas exited; CPU time 153696.904732
06:55:15 (1469646): called boinc_finish(0)

</stderr_txt>
]]>

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