Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-23 18:51:05 (22656): vboxwrapper version 26210
2026-03-23 18:51:05 (22656): BOINC client version: 8.2.4
2026-03-23 18:51:05 (22656): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-03-23 18:51:06 (22656): Successfully copied 'init_data.xml' to the shared directory.
2026-03-23 18:51:06 (22656): Create VM. (boinc_b9a338b660f40cd7, slot#0)
2026-03-23 18:51:06 (22656): Setting Memory Size for VM. (4600MB)
2026-03-23 18:51:07 (22656): Setting CPU Count for VM. (6)
2026-03-23 18:51:07 (22656): Setting Chipset Options for VM.
2026-03-23 18:51:07 (22656): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-23 18:51:07 (22656): Setting Boot Options for VM.
2026-03-23 18:51:08 (22656): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-23 18:51:08 (22656): Enabling VM Network Access.
2026-03-23 18:51:08 (22656): Disabling USB Support for VM.
2026-03-23 18:51:09 (22656): Disabling COM Port Support for VM.
2026-03-23 18:51:09 (22656): Disabling LPT Port Support for VM.
2026-03-23 18:51:09 (22656): Disabling Audio Support for VM.
2026-03-23 18:51:10 (22656): Disabling Clipboard Support for VM.
2026-03-23 18:51:10 (22656): Disabling Drag and Drop Support for VM.
2026-03-23 18:51:10 (22656): Adding storage controller(s) to VM.
2026-03-23 18:51:10 (22656): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-23 18:51:11 (22656): Adding VirtualBox Guest Additions to VM.
2026-03-23 18:51:12 (22656): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-23 18:51:12 (22656): forwarding host port 55282 to guest port 80
2026-03-23 18:51:12 (22656): Enabling remote desktop for VM.
2026-03-23 18:51:12 (22656): Required extension pack not installed, remote desktop not enabled.
2026-03-23 18:51:12 (22656): Enabling shared directory for VM.
2026-03-23 18:51:13 (22656): Starting VM using VBoxManage interface. (boinc_b9a338b660f40cd7, slot#0)
2026-03-23 18:51:18 (22656): Successfully started VM. (PID = '6632')
2026-03-23 18:51:18 (22656): Reporting VM Process ID to BOINC.
2026-03-23 18:51:18 (22656): Guest Log: BIOS: VirtualBox 6.1.12
2026-03-23 18:51:18 (22656): Guest Log: CPUID EDX: 0x178bfbff
2026-03-23 18:51:18 (22656): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-23 18:51:18 (22656): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-23 18:51:18 (22656): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-23 18:51:18 (22656): Detected: Web Application Enabled (http://localhost:55282)
2026-03-23 18:51:18 (22656): Preference change detected
2026-03-23 18:51:18 (22656): Setting CPU throttle for VM. (60%)
2026-03-23 18:51:18 (22656): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-23 18:51:20 (22656): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-23 18:51:20 (22656): Guest Log: BIOS: Booting from Hard Disk...
2026-03-23 18:51:23 (22656): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-23 18:51:23 (22656): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-23 18:51:23 (22656): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-23 18:51:29 (22656): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-23 18:51:29 (22656): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-23 18:51:37 (22656): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.000126 main     Log opened 2026-03-23T18:51:35.924503000Z
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.000208 main     OS Product: Linux
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.000239 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.000265 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.000341 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.000342 main     Process ID: 1335
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.000343 main     Package type: LINUX_64BITS_GENERIC
2026-03-23 18:51:37 (22656): Guest Log: 00:00:00.002431 main     5.2.32 r132073 started. Verbose level = 0
2026-03-23 18:51:37 (22656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-23 18:51:37 (22656): Guest Log: [INFO] Mounting shared directory
2026-03-23 18:51:37 (22656): Guest Log: [INFO] Checking for init_data.xml
2026-03-23 18:51:47 (22656): Guest Log: 00:00:10.006279 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 985 122 000ns (GuestNow=1 774 288 306 944 253 000 ns GuestLast=1 774 291 895 929 375 000 ns fSetTimeLastLoop=true )
2026-03-23 18:52:34 (22656): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-23 18:52:34 (22656): Guest Log: [INFO] Detected branch: prod
2026-03-23 18:52:34 (22656): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-23 18:52:34 (22656): Guest Log: Copying input files
2026-03-23 18:52:37 (22656): Guest Log: Copied input files into RunAtlas.
2026-03-23 18:52:38 (22656): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-23 18:52:38 (22656): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-23 18:52:38 (22656): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-23 18:52:38 (22656): Guest Log: Further information can be found at the LHC@home message board.
2026-03-23 18:52:46 (22656): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-23 18:52:46 (22656): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-23 18:52:46 (22656): Guest Log: 2.6.3.0 1634 0 32192 157612 4 1 3117755 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-23 18:52:48 (22656): Guest Log: copied the webapp to /var/www
2026-03-23 18:52:48 (22656): Guest Log: ATHENA_PROC_NUMBER=6
2026-03-23 18:52:48 (22656): Guest Log: ATHENA_CORE_NUMBER=6
2026-03-23 18:52:48 (22656): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-23 18:52:48 (22656): Guest Log:  *** Starting ATLAS job. (PandaID=7056978900 taskID=49178629) ***
2026-03-23 19:04:07 (22656): Guest Log:  *** Job finished ***
2026-03-23 19:04:07 (22656): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:40,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:44,099 | INFO     | [monitor] cgroup control has ended
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:45,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961779832640)>', '<ExcThread(monitor, started 139961332377344)>']
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:45,987 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:45,987 | INFO     | [monitor] control thread has ended
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,124 | INFO     | all workflow threads have been joined
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,124 | INFO     | end of generic workflow (traces error code: 0)
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,124 | INFO     | traces error code: 0
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,245 [wrapper] ==== pilot stdout END ====
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,250 [wrapper] ==== wrapper stdout RESUME ====
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,254 [wrapper] pilotpid: 6047
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:01:50,260 [wrapper] Pilot exit status: 0
2026-03-23 19:04:07 (22656): Guest Log: ./runpilot2-wrapper.sh: line 1019: /usr/bin/xargs: Input/output error
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:04:03,492 [wrapper] pandaids: 
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:04:03,529 [wrapper] cleanup supervisor_pilot  6053 6048
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:04:03,536 [wrapper] Test setup, not cleaning
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:04:03,541 [wrapper] apfmon messages muted
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:04:03,546 [wrapper] ==== wrapper stdout END ====
2026-03-23 19:04:07 (22656): Guest Log: 2026-03-23 18:04:03,551 [wrapper] ==== wrapper stderr END ====
2026-03-23 19:04:07 (22656): Guest Log:  *** Error codes and diagnostics ***
2026-03-23 19:04:07 (22656): Guest Log:     "exeErrorCode": 65,
2026-03-23 19:04:07 (22656): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2026-03-23 19:04:07 (22656): Guest Log:     "pilotErrorCode": 1305,
2026-03-23 19:04:07 (22656): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2026-03-23 19:04:07 (22656): Guest Log:  *** Listing of results directory ***
2026-03-23 19:04:07 (22656): Guest Log: total 4020
2026-03-23 19:04:07 (22656): Guest Log: -rw-r--r--. 1 atlas atlas  585013 Mar 16 17:24 pilot3.tar.gz
2026-03-23 19:04:07 (22656): Guest Log: -rwx------. 1 atlas atlas   36322 Mar 16 17:27 runpilot2-wrapper.sh
2026-03-23 19:04:07 (22656): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar 16 17:30 queuedata.json
2026-03-23 19:04:07 (22656): Guest Log: -rwxr-xr-x. 1 atlas atlas    8329 Mar 23 17:52 init_data.xml
2026-03-23 19:04:07 (22656): Guest Log: -rwxr-xr-x. 1 atlas atlas  597532 Mar 23 17:52 input.tar.gz
2026-03-23 19:04:07 (22656): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Mar 23 17:52 start_atlas.sh
2026-03-23 19:04:07 (22656): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 23 17:52 EVNT.49129292._000004.pool.root.1 -> /data/./ATLAS.root_0
2026-03-23 19:04:07 (22656): Guest Log: -rw-r--r--. 1 atlas atlas    2608 Mar 23 17:52 pandaJob.out
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas 1511579 Mar 23 17:53 agis_ddmendpoints.agis.ALL.json
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas     417 Mar 23 17:55 workernode_map.json
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas 1010850 Mar 23 17:55 agis_schedconf.cvmfs.json
2026-03-23 19:04:07 (22656): Guest Log: drwx------. 5 atlas atlas    4096 Mar 23 17:55 pilot3
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas    1008 Mar 23 17:59 memory_monitor_summary.json
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas   22396 Mar 23 17:59 log.49178629._000090.job.log.tgz.1
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas      95 Mar 23 18:00 pilot_heartbeat.json
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas    6986 Mar 23 18:01 heartbeat.json
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas    4801 Mar 23 18:01 pilotlog.txt
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas  101362 Mar 23 18:04 log.49178629._000090.job.log.1
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas     188 Mar 23 18:04 output.list
2026-03-23 19:04:07 (22656): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 23 18:04 runtime_log
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas  143360 Mar 23 18:04 result.tar.gz
2026-03-23 19:04:07 (22656): Guest Log: -rw-r--r--. 1 atlas atlas    8580 Mar 23 18:04 runtime_log.err
2026-03-23 19:04:07 (22656): Guest Log: -rw-------. 1 atlas atlas     635 Mar 23 18:04 6f5LDmBuQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2dvLDmBNkQWm.diag
2026-03-23 19:04:07 (22656): Guest Log: Looking for outputfile HITS.49178629._000090.pool.root.1
2026-03-23 19:04:07 (22656): Guest Log: No HITS file was produced
2026-03-23 19:04:07 (22656): Guest Log: Successfully finished the ATLAS job!
2026-03-23 19:04:07 (22656): Guest Log: Copying the results back to the shared directory!
2026-03-23 19:04:07 (22656): Guest Log:  *** Contents of shared directory: ***
2026-03-23 19:04:07 (22656): Guest Log: total 233960
2026-03-23 19:04:07 (22656): Guest Log: -rwxrwxrwx. 1 root root 238802470 Mar 23 17:51 ATLAS.root_0
2026-03-23 19:04:07 (22656): Guest Log: -rwxrwxrwx. 1 root root      8329 Mar 23 17:51 init_data.xml
2026-03-23 19:04:07 (22656): Guest Log: -rwxrwxrwx. 1 root root    597532 Mar 17 00:09 input.tar.gz
2026-03-23 19:04:07 (22656): Guest Log: -rwxrwxrwx. 1 root root    143360 Mar 23 18:04 result.tar.gz
2026-03-23 19:04:07 (22656): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 17 00:09 start_atlas.sh
2026-03-23 19:04:07 (22656): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-23 19:04:07 (22656): VM Completion File Detected.
2026-03-23 19:04:07 (22656): Powering off VM.
2026-03-23 19:04:07 (22656): Successfully stopped VM.
2026-03-23 19:04:07 (22656): Deregistering VM. (boinc_b9a338b660f40cd7, slot#0)
2026-03-23 19:04:07 (22656): Removing network bandwidth throttle group from VM.
2026-03-23 19:04:07 (22656): Removing VM from VirtualBox.
2026-03-23 19:04:13 (22656): called boinc_finish(0)

</stderr_txt>
]]>

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