Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:40 (2596496): wrapper (7.7.26015): starting
07:46:40 (2596496): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 07:46:40] Arguments: --nthreads 4
[2026-03-19 07:46:40] Threads: 4
[2026-03-19 07:46:40] Checking for CVMFS
[2026-03-19 07:46:40] No cvmfs_config command found, will try listing directly
[2026-03-19 07:46:40] CVMFS is ok
[2026-03-19 07:46:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 07:46:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 07:46:40] Further information can be found at the LHC@home message board.
[2026-03-19 07:46:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 07:46:40] Checking for apptainer binary...
[2026-03-19 07:46:40] which: no apptainer in ((null))
[2026-03-19 07:46:40] apptainer is not installed, using version from CVMFS
[2026-03-19 07:46:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 07:46:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot208/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-19 07:46:40] apptainer works
[2026-03-19 07:46:40] Set ATHENA_PROC_NUMBER=4
[2026-03-19 07:46:40] Set ATHENA_CORE_NUMBER=4
[2026-03-19 07:46:40] Starting ATLAS job with PandaID=7056912185
[2026-03-19 07:46:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot208/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 11:19:13]  *** The last 200 lines of the pilot log: ***
[2026-03-19 11:19:13] 2026-03-19 10:16:20,850 | INFO     | preparing for final server update for job 7056912185 in state='finished'
[2026-03-19 11:19:13] 2026-03-19 10:16:20,850 | INFO     | reading metadata from: /var/lib/boinc/var/slot208/slots/0/PanDA_Pilot-7056912185/jobReport.json
[2026-03-19 11:19:13] 2026-03-19 10:16:20,852 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot208/slots/0/workernode_map.json
[2026-03-19 11:19:13] 2026-03-19 10:16:20,852 | INFO     | this job has now completed (state=finished)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,852 | INFO     | log transfer has been attempted: DONE
[2026-03-19 11:19:13] 2026-03-19 10:16:20,852 | INFO     | job 7056912185 has finished - writing final server update
[2026-03-19 11:19:13] 2026-03-19 10:16:20,852 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3862727/.job.ad'
[2026-03-19 11:19:13] 2026-03-19 10:16:20,852 | INFO     | total number of processed events: 400 (read)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,870 | INFO     | using path: /var/lib/boinc/var/slot208/slots/0/PanDA_Pilot-7056912185/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,870 | INFO     | extracted standard info from prmon json
[2026-03-19 11:19:13] 2026-03-19 10:16:20,870 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 11:19:13] 2026-03-19 10:16:20,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 11:19:13] 2026-03-19 10:16:20,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 11:19:13] 2026-03-19 10:16:20,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 11:19:13] 2026-03-19 10:16:20,873 | INFO     | fitting pss+swap vs Time
[2026-03-19 11:19:13] 2026-03-19 10:16:20,873 | INFO     | sum of square deviations: 2710627567.5
[2026-03-19 11:19:13] 2026-03-19 10:16:20,874 | INFO     | sum of deviations: 25130488602.999996
[2026-03-19 11:19:13] 2026-03-19 10:16:20,874 | INFO     | mean x: 1773909094.5
[2026-03-19 11:19:13] 2026-03-19 10:16:20,874 | INFO     | mean y: 2332843.7572815535
[2026-03-19 11:19:13] 2026-03-19 10:16:20,874 | INFO     | intersect: -16443748800.430191
[2026-03-19 11:19:13] 2026-03-19 10:16:20,874 | INFO     | chi2: 1.0917561697975675
[2026-03-19 11:19:13] 2026-03-19 10:16:20,874 | INFO     | sum of square deviations: 2518000700.0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | sum of deviations: 24373042270.000004
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | mean x: 1773908942.0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | mean y: 2332243.9950248757
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | intersect: -17168257750.875502
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | chi2: 1.0921928371832117
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | current chi2=1.0921928371832117 (change=-0.03999678661996033 %)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | right removable region: 200
[2026-03-19 11:19:13] 2026-03-19 10:16:20,875 | INFO     | sum of square deviations: 2518000700.0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,876 | INFO     | sum of deviations: 4618551254.999999
[2026-03-19 11:19:13] 2026-03-19 10:16:20,876 | INFO     | mean x: 1773909247.0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,876 | INFO     | mean y: 2348840.885572139
[2026-03-19 11:19:13] 2026-03-19 10:16:20,876 | INFO     | intersect: -3251379714.0699344
[2026-03-19 11:19:13] 2026-03-19 10:16:20,876 | INFO     | chi2: 0.0024383408376677045
[2026-03-19 11:19:13] 2026-03-19 10:16:20,876 | INFO     | current chi2=0.0024383408376677045 (change=99.77665884515955 %)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,876 | INFO     | sum of square deviations: 2334722845.0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | sum of deviations: 4603658409.999999
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | mean x: 1773909399.5
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | mean y: 2348850.9897959186
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | intersect: -3495485139.4880857
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | chi2: 0.0022856007928206273
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | current chi2=0.0022856007928206273 (change=6.264097393093512 %)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | left removable region: 20
[2026-03-19 11:19:13] 2026-03-19 10:16:20,877 | INFO     | sum of square deviations: 1808350185.0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,878 | INFO     | sum of deviations: 4894042931.999999
[2026-03-19 11:19:13] 2026-03-19 10:16:20,878 | INFO     | mean x: 1773909521.5
[2026-03-19 11:19:13] 2026-03-19 10:16:20,878 | INFO     | mean y: 2348053.677777778
[2026-03-19 11:19:13] 2026-03-19 10:16:20,878 | INFO     | intersect: -4798486114.237865
[2026-03-19 11:19:13] 2026-03-19 10:16:20,878 | INFO     | chi2: 0.0004844339658527637
[2026-03-19 11:19:13] 2026-03-19 10:16:20,878 | INFO     | current memory leak: 2.71 B/s (using 180 data points, chi2=0.00)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | could have reported an average CPU frequency of 3543 MHz (10 samples)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | ..............................
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . Timing measurements:
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . get job = 0 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . initial setup = 5 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . payload setup = 8 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . stage-in = 0 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . payload execution = 12537 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . stage-out = 0 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | . log creation = 0 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,879 | INFO     | ..............................
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | 
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | job summary report
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | --------------------------------------------------
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | PanDA job id: 7056912185
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | task id: 49177032
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | errors: (none)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | pilot state: finished 
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | transexitcode: 0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | exeerrorcode: 0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | exeerrordiag: 
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | exitcode: 0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | exitmsg: OK
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | cpuconsumptiontime: 48829 s
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | nevents: 400
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | neventsw: 0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | pid: 2608216
[2026-03-19 11:19:13] 2026-03-19 10:16:20,926 | INFO     | pgrp: 2608216
[2026-03-19 11:19:13] 2026-03-19 10:16:20,927 | INFO     | corecount: 4
[2026-03-19 11:19:13] 2026-03-19 10:16:20,927 | INFO     | event service: False
[2026-03-19 11:19:13] 2026-03-19 10:16:20,927 | INFO     | sizes: {0: 2280327, 11: 2280327, 12550: 2318892, 12551: 2318892, 12554: 2319086}
[2026-03-19 11:19:13] 2026-03-19 10:16:20,927 | INFO     | --------------------------------------------------
[2026-03-19 11:19:13] 2026-03-19 10:16:20,927 | INFO     | 
[2026-03-19 11:19:13] 2026-03-19 10:16:20,927 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot208/slots/0
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | job 7056912185 has completed (purged errors)
[2026-03-19 11:19:13] 2026-03-19 10:16:20,945 | INFO     | overall cleanup function is called
[2026-03-19 11:19:13] 2026-03-19 10:16:21,953 | INFO     | --- collectZombieJob: --- 10, [2608216]
[2026-03-19 11:19:13] 2026-03-19 10:16:21,953 | INFO     | zombie collector waiting for pid 2608216
[2026-03-19 11:19:13] 2026-03-19 10:16:21,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 11:19:13] 2026-03-19 10:16:21,953 | INFO     | collected zombie processes
[2026-03-19 11:19:13] 2026-03-19 10:16:21,953 | INFO     | will attempt to kill all subprocesses of pid=2608216
[2026-03-19 11:19:13] 2026-03-19 10:16:22,403 | INFO     | process IDs to be killed: [2608216] (in reverse order)
[2026-03-19 11:19:13] 2026-03-19 10:16:22,623 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 11:19:13] 2026-03-19 10:16:22,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 11:19:13] 2026-03-19 10:16:22,653 | INFO     | did not find any defunct processes belonging to 2608216
[2026-03-19 11:19:13] 2026-03-19 10:16:22,684 | INFO     | did not find any defunct processes belonging to 2608216
[2026-03-19 11:19:13] 2026-03-19 10:16:22,684 | INFO     | ready for new job
[2026-03-19 11:19:13] 2026-03-19 10:16:22,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 11:19:13] 2026-03-19 10:16:22,686 | INFO     | **************************************
[2026-03-19 11:19:13] 2026-03-19 10:16:22,686 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 11:19:13] 2026-03-19 10:16:22,686 | INFO     | **************************************
[2026-03-19 11:19:13] 2026-03-19 10:16:22,686 | INFO     | 
[2026-03-19 11:19:13] 2026-03-19 10:16:22,692 | INFO     | architecture information:
[2026-03-19 11:19:13] 2026-03-19 10:16:22,692 | INFO     | executing command: cat /etc/os-release
[2026-03-19 11:19:13] 2026-03-19 10:16:22,709 | INFO     | cat /etc/os-release:
[2026-03-19 11:19:13] NAME="CentOS Linux"
[2026-03-19 11:19:13] VERSION="7 (Core)"
[2026-03-19 11:19:13] ID="centos"
[2026-03-19 11:19:13] ID_LIKE="rhel fedora"
[2026-03-19 11:19:13] VERSION_ID="7"
[2026-03-19 11:19:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 11:19:13] ANSI_COLOR="0;31"
[2026-03-19 11:19:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 11:19:13] HOME_URL="https://www.centos.org/"
[2026-03-19 11:19:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 11:19:13] 
[2026-03-19 11:19:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 11:19:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 11:19:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 11:19:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 11:19:13] 
[2026-03-19 11:19:13] 2026-03-19 10:16:22,709 | INFO     | **************************************
[2026-03-19 11:19:13] 2026-03-19 10:16:23,212 | INFO     | executing command: df -mP /var/lib/boinc/var/slot208/slots/0
[2026-03-19 11:19:13] 2026-03-19 10:16:23,230 | INFO     | sufficient remaining disk space (62890442752 B)
[2026-03-19 11:19:13] 2026-03-19 10:16:23,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 11:19:13] 2026-03-19 10:16:23,230 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 11:19:13] 2026-03-19 10:16:23,230 | INFO     | update_server=False
[2026-03-19 11:19:13] 2026-03-19 10:16:23,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 11:19:13] 2026-03-19 10:16:23,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 11:19:13] 2026-03-19 10:16:23,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 11:19:13] 2026-03-19 10:16:23,345 | INFO     | aborting loop
[2026-03-19 11:19:13] 2026-03-19 10:16:23,382 | INFO     | all payload control threads have been joined
[2026-03-19 11:19:13] 2026-03-19 10:16:23,495 | INFO     | all data control threads have been joined
[2026-03-19 11:19:13] 2026-03-19 10:16:24,236 | INFO     | [job] retrieve thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 11:19:13] 2026-03-19 10:16:24,350 | INFO     | [job] job monitor thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,388 | INFO     | [payload] control thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,407 | INFO     | [payload] validate_post thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,451 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,501 | INFO     | [data] control thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,530 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,592 | INFO     | all job control threads have been joined
[2026-03-19 11:19:13] 2026-03-19 10:16:24,689 | INFO     | [job] validate thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:24,870 | INFO     | [payload] failed_post thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:25,239 | INFO     | [data] copytool_out thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:25,278 | INFO     | [data] copytool_in thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:25,469 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:25,597 | INFO     | [job] control thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:25,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 11:19:13] 2026-03-19 10:16:26,939 | INFO     | [job] queue monitor thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:28,330 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:33,878 | INFO     | job.realtimelogging is not enabled
[2026-03-19 11:19:13] 2026-03-19 10:16:34,883 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 11:19:13] 2026-03-19 10:16:49,590 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-03-19 11:19:13] 2026-03-19 10:16:53,358 | INFO     | PID=2601419 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 11:19:13] 2026-03-19 10:16:53,358 | INFO     | .. there are 39 such processes running
[2026-03-19 11:19:13] 2026-03-19 10:16:53,359 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 11:19:13] 2026-03-19 10:16:53,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 11:19:13] 2026-03-19 10:16:53,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 11:19:13] 2026-03-19 10:17:16,486 | INFO     | [monitor] cgroup control has ended
[2026-03-19 11:19:13] 2026-03-19 10:17:17,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22475869816640)>', '<ExcThread(monitor, started 22475563857664)>']
[2026-03-19 11:19:13] 2026-03-19 10:17:18,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 11:19:13] 2026-03-19 10:17:18,477 | INFO     | [monitor] control thread has ended
[2026-03-19 11:19:13] 2026-03-19 10:17:22,871 | INFO     | all workflow threads have been joined
[2026-03-19 11:19:13] 2026-03-19 10:17:22,871 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 11:19:13] 2026-03-19 10:17:22,872 | INFO     | traces error code: 0
[2026-03-19 11:19:13] 2026-03-19 10:17:22,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 11:19:13] 2026-03-19 10:17:23,002 [wrapper] ==== pilot stdout END ====
[2026-03-19 11:19:13] 2026-03-19 10:17:23,006 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 11:19:13] 2026-03-19 10:17:23,008 [wrapper] pilotpid: 2601419
[2026-03-19 11:19:13] 2026-03-19 10:17:23,010 [wrapper] Pilot exit status: 0
[2026-03-19 11:19:13] 2026-03-19 10:17:23,018 [wrapper] pandaids: 7056912185
[2026-03-19 11:19:13] 2026-03-19 10:17:23,157 [wrapper] cleanup supervisor_pilot 3507901 2601420
[2026-03-19 11:19:13] 2026-03-19 10:17:23,160 [wrapper] Test setup, not cleaning
[2026-03-19 11:19:13] 2026-03-19 10:17:23,162 [wrapper] apfmon messages muted
[2026-03-19 11:19:13] 2026-03-19 10:17:23,164 [wrapper] ==== wrapper stdout END ====
[2026-03-19 11:19:13] 2026-03-19 10:17:23,166 [wrapper] ==== wrapper stderr END ====
[2026-03-19 11:19:13]  *** Error codes and diagnostics ***
[2026-03-19 11:19:13]     "exeErrorCode": 0,
[2026-03-19 11:19:13]     "exeErrorDiag": "",
[2026-03-19 11:19:13]     "pilotErrorCode": 0,
[2026-03-19 11:19:13]     "pilotErrorDiag": "",
[2026-03-19 11:19:13]  *** Listing of results directory ***
[2026-03-19 11:19:13] total 474324
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc    585013 Mar 16 14:19 pilot3.tar.gz
[2026-03-19 11:19:13] -rwx------. 1 boinc boinc     36322 Mar 16 14:30 runpilot2-wrapper.sh
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc      5111 Mar 16 14:44 queuedata.json
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc       100 Mar 19 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 11:19:13] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 07:46 run_atlas
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc       105 Mar 19 07:46 job.xml
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc      6709 Mar 19 07:46 init_data.xml
[2026-03-19 11:19:13] -rw-r--r--. 2 boinc boinc 235552834 Mar 19 07:46 EVNT.49136164._000016.pool.root.1
[2026-03-19 11:19:13] drwxrwx--x. 2 boinc boinc      4096 Mar 19 07:46 shared
[2026-03-19 11:19:13] -rw-r--r--. 2 boinc boinc    597547 Mar 19 07:46 input.tar.gz
[2026-03-19 11:19:13] -rw-r--r--. 2 boinc boinc     15845 Mar 19 07:46 start_atlas.sh
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc         0 Mar 19 07:46 boinc_lockfile
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc      2629 Mar 19 07:46 pandaJob.out
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc   1010809 Mar 19 07:46 agis_schedconf.cvmfs.json
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc       444 Mar 19 07:46 workernode_map.json
[2026-03-19 11:19:13] drwx------. 5 boinc boinc      4096 Mar 19 07:46 pilot3
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc       529 Mar 19 11:15 boinc_task_state.xml
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc 241958929 Mar 19 11:15 HITS.49177032._000381.pool.root.1
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc        95 Mar 19 11:15 pilot_heartbeat.json
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc      1028 Mar 19 11:16 memory_monitor_summary.json
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc   1511579 Mar 19 11:16 agis_ddmendpoints.agis.ALL.json
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc    371031 Mar 19 11:16 log.49177032._000381.job.log.tgz.1
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc      6348 Mar 19 11:16 heartbeat.json
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc      4902 Mar 19 11:17 pilotlog.txt
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc   1755987 Mar 19 11:17 log.49177032._000381.job.log.1
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc       357 Mar 19 11:17 output.list
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc       620 Mar 19 11:17 runtime_log
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc   2140160 Mar 19 11:17 result.tar.gz
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc       665 Mar 19 11:17 t6oLDmvCNM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmw0wLDmTLNdgm.diag
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc      9222 Mar 19 11:17 runtime_log.err
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc        26 Mar 19 11:18 wrapper_checkpoint.txt
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc      8192 Mar 19 11:19 boinc_mmap_file
[2026-03-19 11:19:13] -rw-r--r--. 1 boinc boinc     21118 Mar 19 11:19 stderr.txt
[2026-03-19 11:19:13] HITS file was successfully produced:
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc 241958929 Mar 19 11:15 shared/HITS.pool.root.1
[2026-03-19 11:19:13]  *** Contents of shared directory: ***
[2026-03-19 11:19:13] total 469028
[2026-03-19 11:19:13] -rw-r--r--. 2 boinc boinc 235552834 Mar 19 07:46 ATLAS.root_0
[2026-03-19 11:19:13] -rw-r--r--. 2 boinc boinc    597547 Mar 19 07:46 input.tar.gz
[2026-03-19 11:19:13] -rw-r--r--. 2 boinc boinc     15845 Mar 19 07:46 start_atlas.sh
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc 241958929 Mar 19 11:15 HITS.pool.root.1
[2026-03-19 11:19:13] -rw-------. 1 boinc boinc   2140160 Mar 19 11:17 result.tar.gz
11:19:14 (2596496): run_atlas exited; CPU time 49433.820973
11:19:14 (2596496): called boinc_finish(0)

</stderr_txt>
]]>

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