Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:19:54 (4031868): wrapper (7.7.26015): starting
09:19:54 (4031868): wrapper: running run_atlas (--nthreads 3)
[2026-03-17 09:19:54] Arguments: --nthreads 3
[2026-03-17 09:19:54] Threads: 3
[2026-03-17 09:19:54] Checking for CVMFS
[2026-03-17 09:19:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 09:19:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 09:19:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 09:19:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 09:19:54] 2.9.2.0 3943472 956 59904 157365 1 49 30971268 36864000 0 130560 0 247080 99.982 20352 3986 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-17 09:19:54] CVMFS is ok
[2026-03-17 09:19:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 09:19:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 09:19:54] Further information can be found at the LHC@home message board.
[2026-03-17 09:19:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 09:19:54] Checking for apptainer binary...
[2026-03-17 09:19:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 09:19:54] Running /usr/bin/apptainer --version
[2026-03-17 09:19:54] apptainer version 1.4.1-1.1
[2026-03-17 09:19:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 09:19:55] thA387a
[2026-03-17 09:19:55] apptainer works
[2026-03-17 09:19:55] Set ATHENA_PROC_NUMBER=3
[2026-03-17 09:19:55] Set ATHENA_CORE_NUMBER=3
[2026-03-17 09:19:55] Starting ATLAS job with PandaID=7056976734
[2026-03-17 09:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 12:43:38]  *** The last 200 lines of the pilot log: ***
[2026-03-17 12:43:38] 2026-03-17 11:43:07,937 | INFO     | cat /etc/os-release:
[2026-03-17 12:43:38] NAME="CentOS Linux"
[2026-03-17 12:43:38] VERSION="7 (Core)"
[2026-03-17 12:43:38] ID="centos"
[2026-03-17 12:43:38] ID_LIKE="rhel fedora"
[2026-03-17 12:43:38] VERSION_ID="7"
[2026-03-17 12:43:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 12:43:38] ANSI_COLOR="0;31"
[2026-03-17 12:43:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 12:43:38] HOME_URL="https://www.centos.org/"
[2026-03-17 12:43:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 12:43:38] 
[2026-03-17 12:43:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 12:43:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 12:43:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 12:43:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 12:43:38] 
[2026-03-17 12:43:38] 2026-03-17 11:43:07,937 | INFO     | **************************************
[2026-03-17 12:43:38] 2026-03-17 11:43:08,440 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-17 12:43:38] 2026-03-17 11:43:08,452 | INFO     | sufficient remaining disk space (227795795968 B)
[2026-03-17 12:43:38] 2026-03-17 11:43:08,452 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 12:43:38] 2026-03-17 11:43:08,452 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 12:43:38] 2026-03-17 11:43:08,452 | INFO     | update_server=False
[2026-03-17 12:43:38] 2026-03-17 11:43:08,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 12:43:38] 2026-03-17 11:43:08,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 12:43:38] 2026-03-17 11:43:08,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 12:43:38] 2026-03-17 11:43:08,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 12:43:38] 2026-03-17 11:43:08,678 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 12:43:38] 2026-03-17 11:43:08,678 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 12:43:38] 2026-03-17 11:43:08,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 12:43:38] 2026-03-17 11:43:08,678 | INFO     | will abort loop
[2026-03-17 12:43:38] 2026-03-17 11:43:08,876 | INFO     | all payload control threads have been joined
[2026-03-17 12:43:38] 2026-03-17 11:43:09,191 | INFO     | all data control threads have been joined
[2026-03-17 12:43:38] 2026-03-17 11:43:09,458 | INFO     | [job] retrieve thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:09,458 | INFO     | [job] queue monitor thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:09,602 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:09,684 | INFO     | [job] job monitor thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:09,764 | INFO     | all job control threads have been joined
[2026-03-17 12:43:38] 2026-03-17 11:43:09,808 | INFO     | [job] validate thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:09,815 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:09,881 | INFO     | [payload] control thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:09,924 | INFO     | [payload] validate_post thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:10,112 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:10,197 | INFO     | [data] control thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:10,219 | INFO     | [payload] failed_post thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:10,270 | INFO     | [data] copytool_in thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:10,454 | INFO     | [data] copytool_out thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:10,770 | INFO     | [job] control thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:12,459 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:17,658 | INFO     | [monitor] cgroup control has ended
[2026-03-17 12:43:38] 2026-03-17 11:43:19,051 | INFO     | job.realtimelogging is not enabled
[2026-03-17 12:43:38] 2026-03-17 11:43:20,057 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 12:43:38] 2026-03-17 11:43:20,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078684206912)>', '<ExcThread(monitor, started 140078194087680)>']
[2026-03-17 12:43:38] 2026-03-17 11:43:25,950 | INFO     | all workflow threads have been joined
[2026-03-17 12:43:38] 2026-03-17 11:43:25,950 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 12:43:38] 2026-03-17 11:43:25,950 | INFO     | traces error code: 0
[2026-03-17 12:43:38] 2026-03-17 11:43:25,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 12:43:38] 2026-03-17 11:43:38,515 | INFO     | PID=4035911 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 12:43:38] 2026-03-17 11:43:38,515 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 12:43:38] 2026-03-17 11:43:38,515 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 12:43:38] 2026-03-17 11:43:38,515 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 12:43:38] 2026-03-17 11:43:38,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 12:43:38] 2026-03-17 11:43:38,515 | INFO     | [monitor] control thread has ended
[2026-03-17 12:43:38] 2026-03-17 11:43:38,561 [wrapper] ==== pilot stdout END ====
[2026-03-17 12:43:38] 2026-03-17 11:43:38,564 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 12:43:38] 2026-03-17 11:43:38,566 [wrapper] pilotpid: 4035911
[2026-03-17 12:43:38] 2026-03-17 11:43:38,568 [wrapper] Pilot exit status: 0
[2026-03-17 12:43:38] 2026-03-17 11:43:38,576 [wrapper] pandaids: 7056976734
[2026-03-17 12:43:38] 2026-03-17 11:43:38,591 [wrapper] cleanup supervisor_pilot 4047142 4035912
[2026-03-17 12:43:38] 2026-03-17 11:43:38,594 [wrapper] Test setup, not cleaning
[2026-03-17 12:43:38] 2026-03-17 11:43:38,596 [wrapper] apfmon messages muted
[2026-03-17 12:43:38] 2026-03-17 11:43:38,598 [wrapper] ==== wrapper stdout END ====
[2026-03-17 12:43:38] 2026-03-17 11:43:38,601 [wrapper] ==== wrapper stderr END ====
[2026-03-17 12:43:38]  *** Error codes and diagnostics ***
[2026-03-17 12:43:38]     "exeErrorCode": 0,
[2026-03-17 12:43:38]     "exeErrorDiag": "",
[2026-03-17 12:43:38]     "pilotErrorCode": 0,
[2026-03-17 12:43:38]     "pilotErrorDiag": "",
[2026-03-17 12:43:38]  *** Listing of results directory ***
[2026-03-17 12:43:38] total 477888
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc    585013 Mar 16 18:24 pilot3.tar.gz
[2026-03-17 12:43:38] -rwx------ 1 boinc boinc     36322 Mar 16 18:24 runpilot2-wrapper.sh
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc      5111 Mar 16 18:25 queuedata.json
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc       100 Mar 17 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 12:43:38] -rwxr-xr-x 1 boinc boinc      7986 Mar 17 09:19 run_atlas
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc       105 Mar 17 09:19 job.xml
[2026-03-17 12:43:38] -rw-r--r-- 2 boinc boinc 241867286 Mar 17 09:19 EVNT.49135495._000019.pool.root.1
[2026-03-17 12:43:38] -rw-r--r-- 2 boinc boinc    597541 Mar 17 09:19 input.tar.gz
[2026-03-17 12:43:38] -rw-r--r-- 2 boinc boinc     15845 Mar 17 09:19 start_atlas.sh
[2026-03-17 12:43:38] drwxrwx--x 2 boinc boinc      4096 Mar 17 09:19 shared
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc         0 Mar 17 09:19 boinc_setup_complete
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc      6439 Mar 17 09:19 init_data.xml
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc         0 Mar 17 09:19 boinc_lockfile
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc      2618 Mar 17 09:19 pandaJob.out
[2026-03-17 12:43:38] -rw------- 1 boinc boinc   1006426 Mar 17 09:20 agis_schedconf.cvmfs.json
[2026-03-17 12:43:38] -rw------- 1 boinc boinc       427 Mar 17 09:20 workernode_map.json
[2026-03-17 12:43:38] drwx------ 5 boinc boinc      4096 Mar 17 09:20 pilot3
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc       530 Mar 17 12:42 boinc_task_state.xml
[2026-03-17 12:43:38] -rw------- 1 boinc boinc 239425937 Mar 17 12:42 HITS.49181660._000455.pool.root.1
[2026-03-17 12:43:38] -rw------- 1 boinc boinc        95 Mar 17 12:43 pilot_heartbeat.json
[2026-03-17 12:43:38] -rw------- 1 boinc boinc      1023 Mar 17 12:43 memory_monitor_summary.json
[2026-03-17 12:43:38] -rw------- 1 boinc boinc   1511579 Mar 17 12:43 agis_ddmendpoints.agis.ALL.json
[2026-03-17 12:43:38] -rw------- 1 boinc boinc    349009 Mar 17 12:43 log.49181660._000455.job.log.tgz.1
[2026-03-17 12:43:38] -rw------- 1 boinc boinc      6321 Mar 17 12:43 heartbeat.json
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc        28 Mar 17 12:43 wrapper_checkpoint.txt
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc      8192 Mar 17 12:43 boinc_mmap_file
[2026-03-17 12:43:38] -rw------- 1 boinc boinc       747 Mar 17 12:43 pilotlog.txt
[2026-03-17 12:43:38] -rw------- 1 boinc boinc   1721483 Mar 17 12:43 log.49181660._000455.job.log.1
[2026-03-17 12:43:38] -rw------- 1 boinc boinc       357 Mar 17 12:43 output.list
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc       620 Mar 17 12:43 runtime_log
[2026-03-17 12:43:38] -rw------- 1 boinc boinc   2088960 Mar 17 12:43 result.tar.gz
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc      8902 Mar 17 12:43 runtime_log.err
[2026-03-17 12:43:38] -rw------- 1 boinc boinc       661 Mar 17 12:43 gLIMDmSrQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5jyLDm7u1Ram.diag
[2026-03-17 12:43:38] -rw-r--r-- 1 boinc boinc      9108 Mar 17 12:43 stderr.txt
[2026-03-17 12:43:38] HITS file was successfully produced:
[2026-03-17 12:43:38] -rw------- 1 boinc boinc 239425937 Mar 17 12:42 shared/HITS.pool.root.1
[2026-03-17 12:43:38]  *** Contents of shared directory: ***
[2026-03-17 12:43:38] total 472664
[2026-03-17 12:43:38] -rw-r--r-- 2 boinc boinc 241867286 Mar 17 09:19 ATLAS.root_0
[2026-03-17 12:43:38] -rw-r--r-- 2 boinc boinc    597541 Mar 17 09:19 input.tar.gz
[2026-03-17 12:43:38] -rw-r--r-- 2 boinc boinc     15845 Mar 17 09:19 start_atlas.sh
[2026-03-17 12:43:38] -rw------- 1 boinc boinc 239425937 Mar 17 12:42 HITS.pool.root.1
[2026-03-17 12:43:38] -rw------- 1 boinc boinc   2088960 Mar 17 12:43 result.tar.gz
12:43:40 (4031868): run_atlas exited; CPU time 35425.357649
12:43:40 (4031868): called boinc_finish(0)

</stderr_txt>
]]>

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