Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
10:05:47 (1951835): wrapper (7.7.26015): starting
10:05:47 (1951835): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 10:05:47] Arguments: --nthreads 12
[2026-03-19 10:05:47] Threads: 12
[2026-03-19 10:05:47] Checking for CVMFS
[2026-03-19 10:05:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-19 10:05:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-19 10:05:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-19 10:05:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-19 10:05:48] 2.13.3.0 3913937 8848 51368 157448 3 188 2915503 4096001 1824 130560 0 6210353 99.915 657426 714 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-19 10:05:48] CVMFS is ok
[2026-03-19 10:05:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 10:05:48] Checking for apptainer binary...
[2026-03-19 10:05:48] apptainer is not installed, using version from CVMFS
[2026-03-19 10:05:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 10:05:49] ryzen4700s
[2026-03-19 10:05:49] apptainer works
[2026-03-19 10:05:49] Set ATHENA_PROC_NUMBER=12
[2026-03-19 10:05:49] Set ATHENA_CORE_NUMBER=12
[2026-03-19 10:05:49] Starting ATLAS job with PandaID=7056969067
[2026-03-19 10:05:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 16:27:13]  *** The last 200 lines of the pilot log: ***
[2026-03-19 16:27:13] 2026-03-19 16:26:29,004 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 16:27:13] 2026-03-19 16:26:29,004 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 16:27:13] 2026-03-19 16:26:29,005 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 16:27:13] 2026-03-19 16:26:29,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 16:27:13] 2026-03-19 16:26:29,021 | INFO     | fitting pss+swap vs Time
[2026-03-19 16:27:13] 2026-03-19 16:26:29,029 | INFO     | sum of square deviations: 16221466937.5
[2026-03-19 16:27:13] 2026-03-19 16:26:29,037 | INFO     | sum of deviations: 79495218940.5
[2026-03-19 16:27:13] 2026-03-19 16:26:29,038 | INFO     | mean x: 1773926199.5
[2026-03-19 16:27:13] 2026-03-19 16:26:29,038 | INFO     | mean y: 2690121.393048128
[2026-03-19 16:27:13] 2026-03-19 16:26:29,038 | INFO     | intersect: -8690645207.456991
[2026-03-19 16:27:13] 2026-03-19 16:26:29,038 | INFO     | chi2: 2.8480594309757103
[2026-03-19 16:27:13] 2026-03-19 16:26:29,041 | INFO     | sum of square deviations: 15579529320.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,046 | INFO     | sum of deviations: 103797962584.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,049 | INFO     | mean x: 1773926047.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,049 | INFO     | mean y: 2695828.8075880758
[2026-03-19 16:27:13] 2026-03-19 16:26:29,049 | INFO     | intersect: -11816012276.636578
[2026-03-19 16:27:13] 2026-03-19 16:26:29,050 | INFO     | chi2: 2.148537898670953
[2026-03-19 16:27:13] 2026-03-19 16:26:29,050 | INFO     | current chi2=2.148537898670953 (change=24.561339019007406 %)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,050 | INFO     | right removable region: 368
[2026-03-19 16:27:13] 2026-03-19 16:26:29,050 | INFO     | sum of square deviations: 15579529320.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,056 | INFO     | sum of deviations: -5414285336.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,058 | INFO     | mean x: 1773926352.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,058 | INFO     | mean y: 2710216.8807588075
[2026-03-19 16:27:13] 2026-03-19 16:26:29,058 | INFO     | intersect: 619195043.7007756
[2026-03-19 16:27:13] 2026-03-19 16:26:29,059 | INFO     | chi2: 0.8917218810316896
[2026-03-19 16:27:13] 2026-03-19 16:26:29,059 | INFO     | current chi2=0.8917218810316896 (change=68.69019405517824 %)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,059 | INFO     | sum of square deviations: 14954754815.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,068 | INFO     | sum of deviations: -26861012853.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,068 | INFO     | mean x: 1773926504.5
[2026-03-19 16:27:13] 2026-03-19 16:26:29,069 | INFO     | mean y: 2715450.598901099
[2026-03-19 16:27:13] 2026-03-19 16:26:29,069 | INFO     | intersect: 3188957099.299035
[2026-03-19 16:27:13] 2026-03-19 16:26:29,069 | INFO     | chi2: 0.7897964968274049
[2026-03-19 16:27:13] 2026-03-19 16:26:29,069 | INFO     | current chi2=0.7897964968274049 (change=11.430176422985237 %)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,069 | INFO     | left removable region: 20
[2026-03-19 16:27:13] 2026-03-19 16:26:29,070 | INFO     | sum of square deviations: 13068103627.0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,073 | INFO     | sum of deviations: -12276741050.000002
[2026-03-19 16:27:13] 2026-03-19 16:26:29,077 | INFO     | mean x: 1773926626.5
[2026-03-19 16:27:13] 2026-03-19 16:26:29,077 | INFO     | mean y: 2724327.4310344825
[2026-03-19 16:27:13] 2026-03-19 16:26:29,077 | INFO     | intersect: 1669227628.6632793
[2026-03-19 16:27:13] 2026-03-19 16:26:29,078 | INFO     | chi2: 0.022087133675827292
[2026-03-19 16:27:13] 2026-03-19 16:26:29,080 | INFO     | current memory leak: -0.94 B/s (using 348 data points, chi2=0.02)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | could have reported an average CPU frequency of 3806 MHz (16 samples)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | ..............................
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | . Timing measurements:
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | . get job = 0 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | . initial setup = 13 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | . payload setup = 23 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | . stage-in = 0 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | . payload execution = 22766 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,081 | INFO     | . stage-out = 3 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,082 | INFO     | . log creation = 0 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,082 | INFO     | ..............................
[2026-03-19 16:27:13] 2026-03-19 16:26:29,257 | INFO     | 
[2026-03-19 16:27:13] 2026-03-19 16:26:29,257 | INFO     | job summary report
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | --------------------------------------------------
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | PanDA job id: 7056969067
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | task id: 49180657
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | errors: (none)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | pilot state: finished 
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | transexitcode: 0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | exeerrorcode: 0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | exeerrordiag: 
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | exitcode: 0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | exitmsg: OK
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | cpuconsumptiontime: 109069 s
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | nevents: 400
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | neventsw: 0
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | pid: 1992255
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | pgrp: 1992255
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | corecount: 12
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | event service: False
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | sizes: {0: 2279888, 1: 2280349, 22793: 2314834, 22794: 2314833, 22799: 2323989, 22800: 2324127}
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | --------------------------------------------------
[2026-03-19 16:27:13] 2026-03-19 16:26:29,258 | INFO     | 
[2026-03-19 16:27:13] 2026-03-19 16:26:29,259 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2026-03-19 16:27:13] 2026-03-19 16:26:29,306 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,306 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,306 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,306 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,315 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,315 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 16:27:13] 2026-03-19 16:26:29,315 | INFO     | job 7056969067 has completed (purged errors)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,315 | INFO     | overall cleanup function is called
[2026-03-19 16:27:13] 2026-03-19 16:26:29,363 | WARNING  | process 1992255 can no longer be monitored (due to stat problems) - aborting
[2026-03-19 16:27:13] 2026-03-19 16:26:29,432 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,433 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,433 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-19 16:27:13] 2026-03-19 16:26:29,434 | WARNING  | maxPSS not found in memory monitor output
[2026-03-19 16:27:13] 2026-03-19 16:26:29,434 | INFO     | skipping file size check of payload stdout file (/opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-7056969067/payload.stdout) since it has not been created
[2026-03-19 16:27:13] 2026-03-19 16:26:29,434 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2026-03-19 16:27:13] 2026-03-19 16:26:29,472 | INFO     | sufficient remaining disk space (96746864640 B)
[2026-03-19 16:27:13] 2026-03-19 16:26:29,473 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-19 16:27:13] 2026-03-19 16:26:29,473 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-7056969067/HITS.49180657._000533.pool.root.1 since it does n
[2026-03-19 16:27:13] 2026-03-19 16:26:29,718 | INFO     | number of running child processes to parent process 1992255: 1
[2026-03-19 16:27:13] 2026-03-19 16:26:29,718 | INFO     | maximum number of monitored processes: 6
[2026-03-19 16:27:13] 2026-03-19 16:26:29,719 | INFO     | aborting job monitoring since job object (job id=7056969067) has expired
[2026-03-19 16:27:13] 2026-03-19 16:26:30,333 | INFO     | --- collectZombieJob: --- 10, [1992255]
[2026-03-19 16:27:13] 2026-03-19 16:26:30,333 | INFO     | zombie collector waiting for pid 1992255
[2026-03-19 16:27:13] 2026-03-19 16:26:30,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 16:27:13] 2026-03-19 16:26:30,333 | INFO     | collected zombie processes
[2026-03-19 16:27:13] 2026-03-19 16:26:30,333 | INFO     | will attempt to kill all subprocesses of pid=1992255
[2026-03-19 16:27:13] 2026-03-19 16:26:30,616 | INFO     | process IDs to be killed: [1992255] (in reverse order)
[2026-03-19 16:27:13] 2026-03-19 16:26:30,695 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 16:27:13] 2026-03-19 16:26:30,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 16:27:13] 2026-03-19 16:26:30,703 | INFO     | did not find any defunct processes belonging to 1992255
[2026-03-19 16:27:13] 2026-03-19 16:26:30,709 | INFO     | did not find any defunct processes belonging to 1992255
[2026-03-19 16:27:13] 2026-03-19 16:26:30,709 | INFO     | ready for new job
[2026-03-19 16:27:13] 2026-03-19 16:26:30,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 16:27:13] 2026-03-19 16:26:30,715 | INFO     | **************************************
[2026-03-19 16:27:13] 2026-03-19 16:26:30,715 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 16:27:13] 2026-03-19 16:26:30,716 | INFO     | **************************************
[2026-03-19 16:27:13] 2026-03-19 16:26:30,716 | INFO     | 
[2026-03-19 16:27:13] 2026-03-19 16:26:30,720 | INFO     | architecture information:
[2026-03-19 16:27:13] 2026-03-19 16:26:30,720 | INFO     | executing command: cat /etc/os-release
[2026-03-19 16:27:13] 2026-03-19 16:26:30,758 | INFO     | cat /etc/os-release:
[2026-03-19 16:27:13] NAME="CentOS Linux"
[2026-03-19 16:27:13] VERSION="7 (Core)"
[2026-03-19 16:27:13] ID="centos"
[2026-03-19 16:27:13] ID_LIKE="rhel fedora"
[2026-03-19 16:27:13] VERSION_ID="7"
[2026-03-19 16:27:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 16:27:13] ANSI_COLOR="0;31"
[2026-03-19 16:27:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 16:27:13] HOME_URL="https://www.centos.org/"
[2026-03-19 16:27:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 16:27:13] 
[2026-03-19 16:27:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 16:27:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 16:27:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 16:27:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 16:27:13] 
[2026-03-19 16:27:13] 2026-03-19 16:26:30,758 | INFO     | **************************************
[2026-03-19 16:27:13] 2026-03-19 16:26:31,267 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2026-03-19 16:27:13] 2026-03-19 16:26:31,305 | INFO     | sufficient remaining disk space (96750010368 B)
[2026-03-19 16:27:13] 2026-03-19 16:26:31,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 16:27:13] 2026-03-19 16:26:31,306 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 16:27:13] 2026-03-19 16:26:31,306 | INFO     | update_server=False
[2026-03-19 16:27:13] 2026-03-19 16:26:31,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 16:27:13] 2026-03-19 16:26:31,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 16:27:13] 2026-03-19 16:26:31,308 | INFO     | aborting loop
[2026-03-19 16:27:13] 2026-03-19 16:26:31,415 | INFO     | all payload control threads have been joined
[2026-03-19 16:27:13] 2026-03-19 16:26:31,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 16:27:13] 2026-03-19 16:26:31,463 | INFO     | all data control threads have been joined
[2026-03-19 16:27:13] 2026-03-19 16:26:32,313 | INFO     | [job] job monitor thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:32,315 | INFO     | [job] retrieve thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:32,360 | INFO     | all job control threads have been joined
[2026-03-19 16:27:13] 2026-03-19 16:26:32,420 | INFO     | [payload] control thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:32,468 | INFO     | [data] control thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:32,597 | INFO     | [data] copytool_in thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:32,689 | INFO     | [payload] validate_post thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:32,995 | INFO     | [job] validate thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:33,047 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:33,196 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:33,196 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:33,365 | INFO     | [job] control thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:33,459 | INFO     | [data] copytool_out thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:33,508 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:33,911 | INFO     | [payload] failed_post thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:34,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 16:27:13] 2026-03-19 16:26:34,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 16:27:13] 2026-03-19 16:26:35,276 | INFO     | [job] queue monitor thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:26:38,620 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 16:27:13] 2026-03-19 16:27:00,855 | INFO     | PID=1968586 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 16:27:13] 2026-03-19 16:27:00,855 | INFO     | .. there are 3 such processes running
[2026-03-19 16:27:13] 2026-03-19 16:27:00,855 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 16:27:13] 2026-03-19 16:27:00,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 16:27:13] 2026-03-19 16:27:00,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 16:27:13] 2026-03-19 16:27:05,762 | INFO     | [monitor] cgroup control has ended
[2026-03-19 16:27:13] 2026-03-19 16:27:07,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138403894220608)>', '<ExcThread(monitor, started 138403391706880)>']
[2026-03-19 16:27:13] 2026-03-19 16:27:07,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 16:27:13] 2026-03-19 16:27:07,899 | INFO     | [monitor] control thread has ended
[2026-03-19 16:27:13] 2026-03-19 16:27:12,538 | INFO     | all workflow threads have been joined
[2026-03-19 16:27:13] 2026-03-19 16:27:12,538 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 16:27:13] 2026-03-19 16:27:12,538 | INFO     | traces error code: 0
[2026-03-19 16:27:13] 2026-03-19 16:27:12,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 16:27:13] 2026-03-19 16:27:12,923 [wrapper] ==== pilot stdout END ====
[2026-03-19 16:27:13] 2026-03-19 16:27:12,929 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 16:27:13] 2026-03-19 16:27:12,936 [wrapper] pilotpid: 1968586
[2026-03-19 16:27:13] 2026-03-19 16:27:12,944 [wrapper] Pilot exit status: 0
[2026-03-19 16:27:13] 2026-03-19 16:27:12,972 [wrapper] pandaids: 7056969067
[2026-03-19 16:27:13] 2026-03-19 16:27:13,029 [wrapper] cleanup supervisor_pilot 2397606 1968588
[2026-03-19 16:27:13] 2026-03-19 16:27:13,036 [wrapper] Test setup, not cleaning
[2026-03-19 16:27:13] 2026-03-19 16:27:13,043 [wrapper] apfmon messages muted
[2026-03-19 16:27:13] 2026-03-19 16:27:13,050 [wrapper] ==== wrapper stdout END ====
[2026-03-19 16:27:13] 2026-03-19 16:27:13,058 [wrapper] ==== wrapper stderr END ====
[2026-03-19 16:27:13]  *** Error codes and diagnostics ***
[2026-03-19 16:27:13]     "exeErrorCode": 0,
[2026-03-19 16:27:13]     "exeErrorDiag": "",
[2026-03-19 16:27:13]     "pilotErrorCode": 0,
[2026-03-19 16:27:13]     "pilotErrorDiag": "",
[2026-03-19 16:27:13]  *** Listing of results directory ***
[2026-03-19 16:27:13] total 503432
[2026-03-19 16:27:13] -rw-r--r-- 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-19 16:27:13] -rwx------ 1 boinc boinc     36322 Mar 16 16:42 runpilot2-wrapper.sh
[2026-03-19 16:27:13] -rw-r--r-- 1 boinc boinc      5111 Mar 16 16:43 queuedata.json
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc       100 Mar 19 10:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 16:27:13] -rwxr-xr-x 1 boinc boinc      7986 Mar 19 10:05 run_atlas
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc       105 Mar 19 10:05 job.xml
[2026-03-19 16:27:13] -rw-r--r-- 2 boinc boinc 247343935 Mar 19 10:05 EVNT.49133633._000022.pool.root.1
[2026-03-19 16:27:13] drwxrwx--x 2 boinc boinc      4096 Mar 19 10:05 shared
[2026-03-19 16:27:13] -rw-r--r-- 2 boinc boinc    597546 Mar 19 10:05 input.tar.gz
[2026-03-19 16:27:13] -rw-r--r-- 2 boinc boinc     15845 Mar 19 10:05 start_atlas.sh
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc      9466 Mar 19 10:05 init_data.xml
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc         0 Mar 19 10:05 boinc_setup_complete
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc         0 Mar 19 10:05 boinc_lockfile
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc      2614 Mar 19 10:05 pandaJob.out
[2026-03-19 16:27:13] -rw------- 1 boinc boinc   1010816 Mar 19 10:06 agis_schedconf.cvmfs.json
[2026-03-19 16:27:13] -rw------- 1 boinc boinc       426 Mar 19 10:06 workernode_map.json
[2026-03-19 16:27:13] drwx------ 5 boinc boinc      4096 Mar 19 10:06 pilot3
[2026-03-19 16:27:13] -rw------- 1 boinc boinc 256477194 Mar 19 16:25 HITS.49180657._000533.pool.root.1
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc       531 Mar 19 16:25 boinc_task_state.xml
[2026-03-19 16:27:13] -rw------- 1 boinc boinc      1020 Mar 19 16:26 memory_monitor_summary.json
[2026-03-19 16:27:13] -rw------- 1 boinc boinc        95 Mar 19 16:26 pilot_heartbeat.json
[2026-03-19 16:27:13] -rw------- 1 boinc boinc   1511579 Mar 19 16:26 agis_ddmendpoints.agis.ALL.json
[2026-03-19 16:27:13] -rw------- 1 boinc boinc    635192 Mar 19 16:26 log.49180657._000533.job.log.tgz.1
[2026-03-19 16:27:13] -rw------- 1 boinc boinc      6301 Mar 19 16:26 heartbeat.json
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc      8192 Mar 19 16:26 boinc_mmap_file
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc        29 Mar 19 16:26 wrapper_checkpoint.txt
[2026-03-19 16:27:13] -rw------- 1 boinc boinc      4842 Mar 19 16:27 pilotlog.txt
[2026-03-19 16:27:13] -rw------- 1 boinc boinc   3236800 Mar 19 16:27 log.49180657._000533.job.log.1
[2026-03-19 16:27:13] -rw------- 1 boinc boinc       357 Mar 19 16:27 output.list
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc       620 Mar 19 16:27 runtime_log
[2026-03-19 16:27:13] -rw------- 1 boinc boinc   3891200 Mar 19 16:27 result.tar.gz
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc      9177 Mar 19 16:27 runtime_log.err
[2026-03-19 16:27:13] -rw------- 1 boinc boinc       658 Mar 19 16:27 PFGMDmlCQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfZyLDmhSwJCo.diag
[2026-03-19 16:27:13] -rw-rw-r-- 1 boinc boinc     21335 Mar 19 16:27 stderr.txt
[2026-03-19 16:27:13] HITS file was successfully produced:
[2026-03-19 16:27:13] -rw------- 1 boinc boinc 256477194 Mar 19 16:25 shared/HITS.pool.root.1
[2026-03-19 16:27:13]  *** Contents of shared directory: ***
[2026-03-19 16:27:13] total 496424
[2026-03-19 16:27:13] -rw-r--r-- 2 boinc boinc 247343935 Mar 19 10:05 ATLAS.root_0
[2026-03-19 16:27:13] -rw-r--r-- 2 boinc boinc    597546 Mar 19 10:05 input.tar.gz
[2026-03-19 16:27:13] -rw-r--r-- 2 boinc boinc     15845 Mar 19 10:05 start_atlas.sh
[2026-03-19 16:27:13] -rw------- 1 boinc boinc 256477194 Mar 19 16:25 HITS.pool.root.1
[2026-03-19 16:27:13] -rw------- 1 boinc boinc   3891200 Mar 19 16:27 result.tar.gz
16:27:14 (1951835): run_atlas exited; CPU time 109209.665440
16:27:14 (1951835): called boinc_finish(0)

</stderr_txt>
]]>

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