Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:18 (248358): wrapper (7.7.26015): starting
12:53:18 (248358): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 12:53:18] Arguments: --nthreads 4
[2026-03-17 12:53:18] Threads: 4
[2026-03-17 12:53:18] Checking for CVMFS
[2026-03-17 12:53:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 12:53:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 12:53:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 12:53:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 12:53:19] 2.9.2.0 120643 1235 72716 157370 2 50 30256235 36864000 0 130560 0 290176 99.978 28662 6289 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-17 12:53:19] CVMFS is ok
[2026-03-17 12:53:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 12:53:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 12:53:19] Further information can be found at the LHC@home message board.
[2026-03-17 12:53:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 12:53:19] Checking for apptainer binary...
[2026-03-17 12:53:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 12:53:19] Running /usr/bin/apptainer --version
[2026-03-17 12:53:19] apptainer version 1.4.1-1.1
[2026-03-17 12:53:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 12:53:19] thA314
[2026-03-17 12:53:19] apptainer works
[2026-03-17 12:53:19] Set ATHENA_PROC_NUMBER=4
[2026-03-17 12:53:19] Set ATHENA_CORE_NUMBER=4
[2026-03-17 12:53:19] Starting ATLAS job with PandaID=7037108707
[2026-03-17 12:53:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 14:17:05]  *** The last 200 lines of the pilot log: ***
[2026-03-17 14:17:05] 2026-03-17 13:16:34,450 | INFO     | will attempt to kill all subprocesses of pid=256989
[2026-03-17 14:17:05] 2026-03-17 13:16:34,499 | INFO     | process IDs to be killed: [256989] (in reverse order)
[2026-03-17 14:17:05] 2026-03-17 13:16:34,534 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 14:17:05] 2026-03-17 13:16:34,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 14:17:05] 2026-03-17 13:16:34,536 | INFO     | did not find any defunct processes belonging to 256989
[2026-03-17 14:17:05] 2026-03-17 13:16:34,538 | INFO     | did not find any defunct processes belonging to 256989
[2026-03-17 14:17:05] 2026-03-17 13:16:34,538 | INFO     | ready for new job
[2026-03-17 14:17:05] 2026-03-17 13:16:34,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 14:17:05] 2026-03-17 13:16:34,539 | INFO     | **************************************
[2026-03-17 14:17:05] 2026-03-17 13:16:34,539 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-17 14:17:05] 2026-03-17 13:16:34,539 | INFO     | **************************************
[2026-03-17 14:17:05] 2026-03-17 13:16:34,539 | INFO     | 
[2026-03-17 14:17:05] 2026-03-17 13:16:34,540 | INFO     | architecture information:
[2026-03-17 14:17:05] 2026-03-17 13:16:34,540 | INFO     | executing command: cat /etc/os-release
[2026-03-17 14:17:05] 2026-03-17 13:16:34,554 | INFO     | cat /etc/os-release:
[2026-03-17 14:17:05] NAME="CentOS Linux"
[2026-03-17 14:17:05] VERSION="7 (Core)"
[2026-03-17 14:17:05] ID="centos"
[2026-03-17 14:17:05] ID_LIKE="rhel fedora"
[2026-03-17 14:17:05] VERSION_ID="7"
[2026-03-17 14:17:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 14:17:05] ANSI_COLOR="0;31"
[2026-03-17 14:17:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 14:17:05] HOME_URL="https://www.centos.org/"
[2026-03-17 14:17:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 14:17:05] 
[2026-03-17 14:17:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 14:17:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 14:17:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 14:17:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 14:17:05] 
[2026-03-17 14:17:05] 2026-03-17 13:16:34,554 | INFO     | **************************************
[2026-03-17 14:17:05] 2026-03-17 13:16:35,057 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-17 14:17:05] 2026-03-17 13:16:35,074 | INFO     | sufficient remaining disk space (228466884608 B)
[2026-03-17 14:17:05] 2026-03-17 13:16:35,074 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 14:17:05] 2026-03-17 13:16:35,074 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 14:17:05] 2026-03-17 13:16:35,074 | INFO     | update_server=False
[2026-03-17 14:17:05] 2026-03-17 13:16:35,074 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 14:17:05] 2026-03-17 13:16:35,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 14:17:05] 2026-03-17 13:16:35,159 | INFO     | all payload control threads have been joined
[2026-03-17 14:17:05] 2026-03-17 13:16:35,205 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-17 14:17:05] 2026-03-17 13:16:35,206 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-17 14:17:05] 2026-03-17 13:16:35,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:17:05] 2026-03-17 13:16:35,206 | INFO     | will abort loop
[2026-03-17 14:17:05] 2026-03-17 13:16:35,244 | INFO     | all job control threads have been joined
[2026-03-17 14:17:05] 2026-03-17 13:16:35,374 | INFO     | job.realtimelogging is not enabled
[2026-03-17 14:17:05] 2026-03-17 13:16:35,655 | INFO     | all data control threads have been joined
[2026-03-17 14:17:05] 2026-03-17 13:16:35,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 14:17:05] 2026-03-17 13:16:36,080 | INFO     | [job] retrieve thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,092 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,165 | INFO     | [payload] control thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,211 | INFO     | [job] job monitor thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,250 | INFO     | [job] control thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,251 | INFO     | [data] copytool_in thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,376 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,661 | INFO     | [data] control thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,831 | INFO     | [payload] failed_post thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:36,976 | INFO     | [monitor] cgroup control has ended
[2026-03-17 14:17:05] 2026-03-17 13:16:37,057 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:37,080 | INFO     | [data] copytool_out thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:37,419 | INFO     | [job] validate thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:37,565 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:37,596 | INFO     | [payload] validate_post thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:37,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 14:17:05] 2026-03-17 13:16:38,968 | INFO     | [job] queue monitor thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:39,921 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 14:17:05] 2026-03-17 13:16:40,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422061283136)>', '<ExcThread(monitor, started 140421120382720)>']
[2026-03-17 14:17:05] 2026-03-17 13:16:45,526 | INFO     | all workflow threads have been joined
[2026-03-17 14:17:05] 2026-03-17 13:16:45,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 14:17:05] 2026-03-17 13:16:45,527 | INFO     | traces error code: 0
[2026-03-17 14:17:05] 2026-03-17 13:16:45,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 14:17:05] 2026-03-17 13:17:05,675 | INFO     | PID=252470 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-17 14:17:05] 2026-03-17 13:17:05,676 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 14:17:05] 2026-03-17 13:17:05,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 14:17:05] 2026-03-17 13:17:05,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 14:17:05] 2026-03-17 13:17:05,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 14:17:05] 2026-03-17 13:17:05,676 | INFO     | [monitor] control thread has ended
[2026-03-17 14:17:05] 2026-03-17 13:17:05,751 [wrapper] ==== pilot stdout END ====
[2026-03-17 14:17:05] 2026-03-17 13:17:05,756 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 14:17:05] 2026-03-17 13:17:05,760 [wrapper] pilotpid: 252470
[2026-03-17 14:17:05] 2026-03-17 13:17:05,764 [wrapper] Pilot exit status: 0
[2026-03-17 14:17:05] 2026-03-17 13:17:05,776 [wrapper] pandaids: 7037108707
[2026-03-17 14:17:05] 2026-03-17 13:17:05,799 [wrapper] cleanup supervisor_pilot  263784 252471
[2026-03-17 14:17:05] 2026-03-17 13:17:05,803 [wrapper] Test setup, not cleaning
[2026-03-17 14:17:05] 2026-03-17 13:17:05,807 [wrapper] apfmon messages muted
[2026-03-17 14:17:05] 2026-03-17 13:17:05,811 [wrapper] ==== wrapper stdout END ====
[2026-03-17 14:17:05] 2026-03-17 13:17:05,815 [wrapper] ==== wrapper stderr END ====
[2026-03-17 14:17:05]  *** Error codes and diagnostics ***
[2026-03-17 14:17:05]     "exeErrorCode": 0,
[2026-03-17 14:17:05]     "exeErrorDiag": "",
[2026-03-17 14:17:05]     "pilotErrorCode": 0,
[2026-03-17 14:17:05]     "pilotErrorDiag": "",
[2026-03-17 14:17:05]  *** Listing of results directory ***
[2026-03-17 14:17:05] total 483204
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc    584627 Mar  4 04:50 pilot3.tar.gz
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc      5111 Mar  4 04:50 queuedata.json
[2026-03-17 14:17:05] -rwx------ 1 boinc boinc     36322 Mar  4 04:51 runpilot2-wrapper.sh
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc       100 Mar 17 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 14:17:05] -rwxr-xr-x 1 boinc boinc      7986 Mar 17 12:53 run_atlas
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc       105 Mar 17 12:53 job.xml
[2026-03-17 14:17:05] -rw-r--r-- 2 boinc boinc 276874786 Mar 17 12:53 EVNT.48220221._000207.pool.root.1
[2026-03-17 14:17:05] -rw-r--r-- 2 boinc boinc    597957 Mar 17 12:53 input.tar.gz
[2026-03-17 14:17:05] -rw-r--r-- 2 boinc boinc     15845 Mar 17 12:53 start_atlas.sh
[2026-03-17 14:17:05] drwxrwx--x 2 boinc boinc      4096 Mar 17 12:53 shared
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc         0 Mar 17 12:53 boinc_setup_complete
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc      6376 Mar 17 12:53 init_data.xml
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc         0 Mar 17 12:53 boinc_lockfile
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc      2562 Mar 17 12:53 pandaJob.out
[2026-03-17 14:17:05] -rw------- 1 boinc boinc   1006434 Mar 17 12:53 agis_schedconf.cvmfs.json
[2026-03-17 14:17:05] -rw------- 1 boinc boinc   1511579 Mar 17 12:53 agis_ddmendpoints.agis.ALL.json
[2026-03-17 14:17:05] -rw------- 1 boinc boinc       427 Mar 17 12:53 workernode_map.json
[2026-03-17 14:17:05] drwx------ 5 boinc boinc      4096 Mar 17 12:53 pilot3
[2026-03-17 14:17:05] -rw------- 1 boinc boinc 211995535 Mar 17 14:16 HITS.48838586._005140.pool.root.1
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc       529 Mar 17 14:16 boinc_task_state.xml
[2026-03-17 14:17:05] -rw------- 1 boinc boinc      1035 Mar 17 14:16 memory_monitor_summary.json
[2026-03-17 14:17:05] -rw------- 1 boinc boinc    275455 Mar 17 14:16 log.48838586._005140.job.log.tgz.1
[2026-03-17 14:17:05] -rw------- 1 boinc boinc      6313 Mar 17 14:16 heartbeat.json
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc      8192 Mar 17 14:17 boinc_mmap_file
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc        27 Mar 17 14:17 wrapper_checkpoint.txt
[2026-03-17 14:17:05] -rw------- 1 boinc boinc       746 Mar 17 14:17 pilotlog.txt
[2026-03-17 14:17:05] -rw------- 1 boinc boinc        95 Mar 17 14:17 pilot_heartbeat.json
[2026-03-17 14:17:05] -rw------- 1 boinc boinc    729193 Mar 17 14:17 log.48838586._005140.job.log.1
[2026-03-17 14:17:05] -rw------- 1 boinc boinc       357 Mar 17 14:17 output.list
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc       620 Mar 17 14:17 runtime_log
[2026-03-17 14:17:05] -rw------- 1 boinc boinc   1024000 Mar 17 14:17 result.tar.gz
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc      8896 Mar 17 14:17 runtime_log.err
[2026-03-17 14:17:05] -rw------- 1 boinc boinc       657 Mar 17 14:17 mibMDmWRsH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2KHLDmBr5V8m.diag
[2026-03-17 14:17:05] -rw-r--r-- 1 boinc boinc     10505 Mar 17 14:17 stderr.txt
[2026-03-17 14:17:05] HITS file was successfully produced:
[2026-03-17 14:17:05] -rw------- 1 boinc boinc 211995535 Mar 17 14:16 shared/HITS.pool.root.1
[2026-03-17 14:17:05]  *** Contents of shared directory: ***
[2026-03-17 14:17:05] total 479020
[2026-03-17 14:17:05] -rw-r--r-- 2 boinc boinc 276874786 Mar 17 12:53 ATLAS.root_0
[2026-03-17 14:17:05] -rw-r--r-- 2 boinc boinc    597957 Mar 17 12:53 input.tar.gz
[2026-03-17 14:17:05] -rw-r--r-- 2 boinc boinc     15845 Mar 17 12:53 start_atlas.sh
[2026-03-17 14:17:05] -rw------- 1 boinc boinc 211995535 Mar 17 14:16 HITS.pool.root.1
[2026-03-17 14:17:05] -rw------- 1 boinc boinc   1024000 Mar 17 14:17 result.tar.gz
14:17:07 (248358): run_atlas exited; CPU time 18581.387153
14:17:07 (248358): called boinc_finish(0)

</stderr_txt>
]]>

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