Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:58:47 (3884433): wrapper (7.7.26015): starting
02:58:47 (3884433): wrapper: running run_atlas (--nthreads 3)
[2026-03-18 02:58:47] Arguments: --nthreads 3
[2026-03-18 02:58:47] Threads: 3
[2026-03-18 02:58:47] Checking for CVMFS
[2026-03-18 02:58:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 02:58:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 02:59:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 02:59:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 02:59:09] 2.9.2.0 3677611 2194 73832 157397 1 49 23865957 36864001 0 130560 0 530817 99.973 68593 4698 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-18 02:59:09] CVMFS is ok
[2026-03-18 02:59:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 02:59:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 02:59:09] Further information can be found at the LHC@home message board.
[2026-03-18 02:59:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 02:59:09] Checking for apptainer binary...
[2026-03-18 02:59:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 02:59:09] Running /usr/bin/apptainer --version
[2026-03-18 02:59:09] apptainer version 1.4.1-1.1
[2026-03-18 02:59:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 02:59:09] belleA263b
[2026-03-18 02:59:09] apptainer works
[2026-03-18 02:59:09] Set ATHENA_PROC_NUMBER=3
[2026-03-18 02:59:09] Set ATHENA_CORE_NUMBER=3
[2026-03-18 02:59:09] Starting ATLAS job with PandaID=7056986183
[2026-03-18 02:59:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 06:23:41]  *** The last 200 lines of the pilot log: ***
[2026-03-18 06:23:41] 2026-03-18 05:22:39,117 | INFO     | will attempt to kill all subprocesses of pid=3892911
[2026-03-18 06:23:41] 2026-03-18 05:22:39,158 | INFO     | process IDs to be killed: [3892911] (in reverse order)
[2026-03-18 06:23:41] 2026-03-18 05:22:39,184 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 06:23:41] 2026-03-18 05:22:39,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 06:23:41] 2026-03-18 05:22:39,185 | INFO     | did not find any defunct processes belonging to 3892911
[2026-03-18 06:23:41] 2026-03-18 05:22:39,186 | INFO     | did not find any defunct processes belonging to 3892911
[2026-03-18 06:23:41] 2026-03-18 05:22:39,186 | INFO     | ready for new job
[2026-03-18 06:23:41] 2026-03-18 05:22:39,186 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 06:23:41] 2026-03-18 05:22:39,187 | INFO     | **************************************
[2026-03-18 06:23:41] 2026-03-18 05:22:39,187 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 06:23:41] 2026-03-18 05:22:39,187 | INFO     | **************************************
[2026-03-18 06:23:41] 2026-03-18 05:22:39,187 | INFO     | 
[2026-03-18 06:23:41] 2026-03-18 05:22:39,188 | INFO     | architecture information:
[2026-03-18 06:23:41] 2026-03-18 05:22:39,188 | INFO     | executing command: cat /etc/os-release
[2026-03-18 06:23:41] 2026-03-18 05:22:39,197 | INFO     | cat /etc/os-release:
[2026-03-18 06:23:41] NAME="CentOS Linux"
[2026-03-18 06:23:41] VERSION="7 (Core)"
[2026-03-18 06:23:41] ID="centos"
[2026-03-18 06:23:41] ID_LIKE="rhel fedora"
[2026-03-18 06:23:41] VERSION_ID="7"
[2026-03-18 06:23:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 06:23:41] ANSI_COLOR="0;31"
[2026-03-18 06:23:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 06:23:41] HOME_URL="https://www.centos.org/"
[2026-03-18 06:23:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 06:23:41] 
[2026-03-18 06:23:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 06:23:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 06:23:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 06:23:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 06:23:41] 
[2026-03-18 06:23:41] 2026-03-18 05:22:39,197 | INFO     | **************************************
[2026-03-18 06:23:41] 2026-03-18 05:22:39,700 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-18 06:23:41] 2026-03-18 05:22:39,714 | INFO     | sufficient remaining disk space (380230434816 B)
[2026-03-18 06:23:41] 2026-03-18 05:22:39,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 06:23:41] 2026-03-18 05:22:39,714 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 06:23:41] 2026-03-18 05:22:39,715 | INFO     | update_server=False
[2026-03-18 06:23:41] 2026-03-18 05:22:39,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 06:23:41] 2026-03-18 05:22:39,715 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:23:41] 2026-03-18 05:22:39,715 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-18 06:23:41] 2026-03-18 05:22:39,715 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 06:23:41] 2026-03-18 05:22:39,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 06:23:41] 2026-03-18 05:22:39,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 06:23:41] 2026-03-18 05:22:39,834 | INFO     | all job control threads have been joined
[2026-03-18 06:23:41] 2026-03-18 05:22:39,885 | INFO     | all data control threads have been joined
[2026-03-18 06:23:41] 2026-03-18 05:22:40,101 | INFO     | all payload control threads have been joined
[2026-03-18 06:23:41] 2026-03-18 05:22:40,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:23:41] 2026-03-18 05:22:40,226 | INFO     | aborting loop
[2026-03-18 06:23:41] 2026-03-18 05:22:40,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 06:23:41] 2026-03-18 05:22:40,720 | INFO     | [job] queue monitor thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:40,721 | INFO     | [job] retrieve thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:40,839 | INFO     | [job] control thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:40,873 | INFO     | [data] copytool_in thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:40,890 | INFO     | [data] control thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:41,107 | INFO     | [payload] control thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:41,177 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:41,231 | INFO     | [job] job monitor thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:41,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 06:23:41] 2026-03-18 05:22:41,895 | INFO     | [payload] failed_post thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:42,063 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:42,107 | INFO     | [job] validate thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:42,183 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:42,192 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:42,238 | INFO     | [data] copytool_out thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:42,288 | INFO     | [payload] validate_post thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:22:45,866 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 06:23:41] 2026-03-18 05:23:34,461 | INFO     | [monitor] cgroup control has ended
[2026-03-18 06:23:41] 2026-03-18 05:23:36,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140512533681984)>', '<ExcThread(monitor, started 140512044500736)>']
[2026-03-18 06:23:41] 2026-03-18 05:23:37,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 06:23:41] 2026-03-18 05:23:37,017 | INFO     | [monitor] control thread has ended
[2026-03-18 06:23:41] 2026-03-18 05:23:41,506 | INFO     | all workflow threads have been joined
[2026-03-18 06:23:41] 2026-03-18 05:23:41,506 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 06:23:41] 2026-03-18 05:23:41,506 | INFO     | traces error code: 0
[2026-03-18 06:23:41] 2026-03-18 05:23:41,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 06:23:41] 2026-03-18 05:23:41,558 [wrapper] ==== pilot stdout END ====
[2026-03-18 06:23:41] 2026-03-18 05:23:41,560 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 06:23:41] 2026-03-18 05:23:41,563 [wrapper] pilotpid: 3888485
[2026-03-18 06:23:41] 2026-03-18 05:23:41,565 [wrapper] Pilot exit status: 0
[2026-03-18 06:23:41] 2026-03-18 05:23:41,573 [wrapper] pandaids: 7056986183
[2026-03-18 06:23:41] 2026-03-18 05:23:41,591 [wrapper] cleanup supervisor_pilot 3900275 3888486
[2026-03-18 06:23:41] 2026-03-18 05:23:41,593 [wrapper] Test setup, not cleaning
[2026-03-18 06:23:41] 2026-03-18 05:23:41,596 [wrapper] apfmon messages muted
[2026-03-18 06:23:41] 2026-03-18 05:23:41,598 [wrapper] ==== wrapper stdout END ====
[2026-03-18 06:23:41] 2026-03-18 05:23:41,601 [wrapper] ==== wrapper stderr END ====
[2026-03-18 06:23:41]  *** Error codes and diagnostics ***
[2026-03-18 06:23:41]     "exeErrorCode": 0,
[2026-03-18 06:23:41]     "exeErrorDiag": "",
[2026-03-18 06:23:41]     "pilotErrorCode": 0,
[2026-03-18 06:23:41]     "pilotErrorDiag": "",
[2026-03-18 06:23:41]  *** Listing of results directory ***
[2026-03-18 06:23:41] total 489932
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-18 06:23:41] -rwx------ 1 boinc boinc     36322 Mar 16 22:29 runpilot2-wrapper.sh
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc      5111 Mar 16 22:30 queuedata.json
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc       100 Mar 18 02:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 06:23:41] -rwxr-xr-x 1 boinc boinc      7986 Mar 18 02:58 run_atlas
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc       105 Mar 18 02:58 job.xml
[2026-03-18 06:23:41] -rw-r--r-- 2 boinc boinc 242828997 Mar 18 02:58 EVNT.49137741._000010.pool.root.1
[2026-03-18 06:23:41] -rw-r--r-- 2 boinc boinc    597552 Mar 18 02:58 input.tar.gz
[2026-03-18 06:23:41] -rw-r--r-- 2 boinc boinc     15845 Mar 18 02:58 start_atlas.sh
[2026-03-18 06:23:41] drwxrwx--x 2 boinc boinc      4096 Mar 18 02:58 shared
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc         0 Mar 18 02:58 boinc_setup_complete
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc      6448 Mar 18 02:58 init_data.xml
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc         0 Mar 18 02:58 boinc_lockfile
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc      2632 Mar 18 02:59 pandaJob.out
[2026-03-18 06:23:41] -rw------- 1 boinc boinc   1011515 Mar 18 02:59 agis_schedconf.cvmfs.json
[2026-03-18 06:23:41] -rw------- 1 boinc boinc       426 Mar 18 02:59 workernode_map.json
[2026-03-18 06:23:41] drwx------ 5 boinc boinc      4096 Mar 18 02:59 pilot3
[2026-03-18 06:23:41] -rw------- 1 boinc boinc 250767006 Mar 18 06:22 HITS.49182650._000238.pool.root.1
[2026-03-18 06:23:41] -rw------- 1 boinc boinc        95 Mar 18 06:22 pilot_heartbeat.json
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc       530 Mar 18 06:22 boinc_task_state.xml
[2026-03-18 06:23:41] -rw------- 1 boinc boinc      1015 Mar 18 06:22 memory_monitor_summary.json
[2026-03-18 06:23:41] -rw------- 1 boinc boinc   1511579 Mar 18 06:22 agis_ddmendpoints.agis.ALL.json
[2026-03-18 06:23:41] -rw------- 1 boinc boinc    355196 Mar 18 06:22 log.49182650._000238.job.log.tgz.1
[2026-03-18 06:23:41] -rw------- 1 boinc boinc      6302 Mar 18 06:22 heartbeat.json
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc      8192 Mar 18 06:23 boinc_mmap_file
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc        28 Mar 18 06:23 wrapper_checkpoint.txt
[2026-03-18 06:23:41] -rw------- 1 boinc boinc      4552 Mar 18 06:23 pilotlog.txt
[2026-03-18 06:23:41] -rw------- 1 boinc boinc   1728616 Mar 18 06:23 log.49182650._000238.job.log.1
[2026-03-18 06:23:41] -rw------- 1 boinc boinc       357 Mar 18 06:23 output.list
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc       620 Mar 18 06:23 runtime_log
[2026-03-18 06:23:41] -rw------- 1 boinc boinc   2099200 Mar 18 06:23 result.tar.gz
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc      8917 Mar 18 06:23 runtime_log.err
[2026-03-18 06:23:41] -rw------- 1 boinc boinc       664 Mar 18 06:23 GloMDmHgUM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmg9vLDmXataom.diag
[2026-03-18 06:23:41] -rw-r--r-- 1 boinc boinc     10116 Mar 18 06:23 stderr.txt
[2026-03-18 06:23:41] HITS file was successfully produced:
[2026-03-18 06:23:41] -rw------- 1 boinc boinc 250767006 Mar 18 06:22 shared/HITS.pool.root.1
[2026-03-18 06:23:41]  *** Contents of shared directory: ***
[2026-03-18 06:23:41] total 484688
[2026-03-18 06:23:41] -rw-r--r-- 2 boinc boinc 242828997 Mar 18 02:58 ATLAS.root_0
[2026-03-18 06:23:41] -rw-r--r-- 2 boinc boinc    597552 Mar 18 02:58 input.tar.gz
[2026-03-18 06:23:41] -rw-r--r-- 2 boinc boinc     15845 Mar 18 02:58 start_atlas.sh
[2026-03-18 06:23:41] -rw------- 1 boinc boinc 250767006 Mar 18 06:22 HITS.pool.root.1
[2026-03-18 06:23:41] -rw------- 1 boinc boinc   2099200 Mar 18 06:23 result.tar.gz
06:23:43 (3884433): run_atlas exited; CPU time 35533.607984
06:23:43 (3884433): called boinc_finish(0)

</stderr_txt>
]]>

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