Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:43:02 (4097765): wrapper (7.7.26015): starting
13:43:02 (4097765): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 13:43:02] Arguments: --nthreads 12
[2026-03-19 13:43:02] Threads: 12
[2026-03-19 13:43:02] Checking for CVMFS
[2026-03-19 13:43:02] No cvmfs_config command found, will try listing directly
[2026-03-19 13:43:02] CVMFS is ok
[2026-03-19 13:43:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 13:43:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 13:43:02] Further information can be found at the LHC@home message board.
[2026-03-19 13:43:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 13:43:02] Checking for apptainer binary...
[2026-03-19 13:43:02] which: no apptainer in ((null))
[2026-03-19 13:43:02] apptainer is not installed, using version from CVMFS
[2026-03-19 13:43:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 13:43:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-19 13:43:02] apptainer works
[2026-03-19 13:43:02] Set ATHENA_PROC_NUMBER=12
[2026-03-19 13:43:02] Set ATHENA_CORE_NUMBER=12
[2026-03-19 13:43:02] Starting ATLAS job with PandaID=7056986304
[2026-03-19 13:43:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:26:21 (332741): wrapper (7.7.26015): starting
14:26:21 (332741): wrapper: running run_atlas (--nthreads 12)
[2026-03-19 14:26:21] Arguments: --nthreads 12
[2026-03-19 14:26:21] Threads: 12
[2026-03-19 14:26:21] This job has been restarted, cleaning up previous attempt
[2026-03-19 14:26:21] Checking for CVMFS
[2026-03-19 14:26:21] No cvmfs_config command found, will try listing directly
[2026-03-19 14:26:21] CVMFS is ok
[2026-03-19 14:26:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 14:26:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 14:26:21] Further information can be found at the LHC@home message board.
[2026-03-19 14:26:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 14:26:21] Checking for apptainer binary...
[2026-03-19 14:26:21] which: no apptainer in ((null))
[2026-03-19 14:26:21] apptainer is not installed, using version from CVMFS
[2026-03-19 14:26:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 14:26:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot144/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-19 14:26:21] apptainer works
[2026-03-19 14:26:21] Set ATHENA_PROC_NUMBER=12
[2026-03-19 14:26:21] Set ATHENA_CORE_NUMBER=12
[2026-03-19 14:26:21] Starting ATLAS job with PandaID=7056986304
[2026-03-19 14:26:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot144/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 15:37:55]  *** The last 200 lines of the pilot log: ***
[2026-03-19 15:37:55]  is_altstaged=None
[2026-03-19 15:37:55]  is_tar=False
[2026-03-19 15:37:55]  lfn=log.49182650._000359.job.log.tgz.1
[2026-03-19 15:37:55]  mtime=0
[2026-03-19 15:37:55]  protocol_id=None
[2026-03-19 15:37:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-19 15:37:55]  replicas=None
[2026-03-19 15:37:55]  scope=mc23_13p6TeV
[2026-03-19 15:37:55]  status=None
[2026-03-19 15:37:55]  status_code=0
[2026-03-19 15:37:55]  storage_token=
[2026-03-19 15:37:55]  surl=/var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7056986304/log.49182650._000359.job.log.tgz.1
[2026-03-19 15:37:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/6c/log.49182650._000359.job.log.tgz.1
[2026-03-19 15:37:55]  workdir=None
[2026-03-19 15:37:55] ]
[2026-03-19 15:37:55] 2026-03-19 14:37:19,197 | INFO     | monitor loop #316: job 0:7056986304 is in state 'stageout'
[2026-03-19 15:37:55] 2026-03-19 14:37:19,214 | WARNING  | aborting job monitor tasks since payload process 340721 is not running
[2026-03-19 15:37:55] 2026-03-19 14:37:19,214 | INFO     | transferring file log.49182650._000359.job.log.tgz.1 from /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7056986304/log.49182650._000359.job.log.tgz.1 to /var/lib/
[2026-03-19 15:37:55] 2026-03-19 14:37:19,214 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7056986304/log.49182650._000359.job.log.tgz.1 /var/lib/boinc/var/slot144/slots/0/
[2026-03-19 15:37:55] 2026-03-19 14:37:19,230 | INFO     | adding to output.list: log.49182650._000359.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/6c/log.49182650._000359.job.log.tg
[2026-03-19 15:37:55] 2026-03-19 14:37:19,231 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-19 15:37:55] 2026-03-19 14:37:19,231 | INFO     | summary of transferred files:
[2026-03-19 15:37:55] 2026-03-19 14:37:19,231 | INFO     |  -- lfn=log.49182650._000359.job.log.tgz.1, status_code=0, status=transferred
[2026-03-19 15:37:55] 2026-03-19 14:37:19,231 | INFO     | stage-out finished correctly
[2026-03-19 15:37:55] 2026-03-19 14:37:19,282 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 15:37:55] 2026-03-19 14:37:19,555 | INFO     | time since job start (4250s) is within the limit (345600.0s)
[2026-03-19 15:37:55] 2026-03-19 14:37:21,560 | INFO     | time since job start (4252s) is within the limit (345600.0s)
[2026-03-19 15:37:55] 2026-03-19 14:37:21,716 | INFO     | monitor loop #317: job 0:7056986304 is in state 'finished'
[2026-03-19 15:37:55] 2026-03-19 14:37:21,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,280 | INFO     | job 7056986304 has state=finished
[2026-03-19 15:37:55] 2026-03-19 14:37:22,281 | INFO     | preparing for final server update for job 7056986304 in state='finished'
[2026-03-19 15:37:55] 2026-03-19 14:37:22,836 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,836 | INFO     | reading metadata from: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7056986304/jobReport.json
[2026-03-19 15:37:55] 2026-03-19 14:37:22,838 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot144/slots/0/workernode_map.json
[2026-03-19 15:37:55] 2026-03-19 14:37:22,838 | INFO     | this job has now completed (state=finished)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,838 | INFO     | log transfer has been attempted: DONE
[2026-03-19 15:37:55] 2026-03-19 14:37:22,838 | INFO     | job 7056986304 has finished - writing final server update
[2026-03-19 15:37:55] 2026-03-19 14:37:22,839 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4035617/.job.ad'
[2026-03-19 15:37:55] 2026-03-19 14:37:22,839 | INFO     | total number of processed events: 400 (read)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,857 | INFO     | using path: /var/lib/boinc/var/slot144/slots/0/PanDA_Pilot-7056986304/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,858 | INFO     | extracted standard info from prmon json
[2026-03-19 15:37:55] 2026-03-19 14:37:22,858 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 15:37:55] 2026-03-19 14:37:22,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 15:37:55] 2026-03-19 14:37:22,858 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 15:37:55] 2026-03-19 14:37:22,858 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 15:37:55] 2026-03-19 14:37:22,859 | INFO     | fitting pss+swap vs Time
[2026-03-19 15:37:55] 2026-03-19 14:37:22,859 | INFO     | sum of square deviations: 77515872.0
[2026-03-19 15:37:55] 2026-03-19 14:37:22,859 | INFO     | sum of deviations: -1423209666.0000002
[2026-03-19 15:37:55] 2026-03-19 14:37:22,859 | INFO     | mean x: 1773929007.0
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | mean y: 2755194.26984127
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | intersect: 32572509548.0644
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | chi2: 0.0009357271724550075
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | current memory leak: -18.36 B/s (using 63 data points, chi2=0.00)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | could have reported an average CPU frequency of 3775 MHz (6 samples)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | ..............................
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . Timing measurements:
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . get job = 0 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . initial setup = 0 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . payload setup = 6 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . stage-in = 0 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . payload execution = 4227 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . stage-out = 0 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | . log creation = 0 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,860 | INFO     | ..............................
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | 
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | job summary report
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | --------------------------------------------------
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | PanDA job id: 7056986304
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | task id: 49182650
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | errors: (none)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | pilot state: finished 
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | transexitcode: 0
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | exeerrorcode: 0
[2026-03-19 15:37:55] 2026-03-19 14:37:22,911 | INFO     | exeerrordiag: 
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | exitcode: 0
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | exitmsg: OK
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | cpuconsumptiontime: 46377 s
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | nevents: 400
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | neventsw: 0
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | pid: 340721
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | pgrp: 340721
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | corecount: 12
[2026-03-19 15:37:55] 2026-03-19 14:37:22,912 | INFO     | event service: False
[2026-03-19 15:37:55] 2026-03-19 14:37:22,915 | INFO     | sizes: {0: 2280337, 11: 2280337, 4236: 2306357, 4238: 2315435, 4242: 2315573}
[2026-03-19 15:37:55] 2026-03-19 14:37:22,915 | INFO     | --------------------------------------------------
[2026-03-19 15:37:55] 2026-03-19 14:37:22,915 | INFO     | 
[2026-03-19 15:37:55] 2026-03-19 14:37:22,916 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot144/slots/0
[2026-03-19 15:37:55] 2026-03-19 14:37:22,935 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,935 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,935 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,935 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | job 7056986304 has completed (purged errors)
[2026-03-19 15:37:55] 2026-03-19 14:37:22,936 | INFO     | overall cleanup function is called
[2026-03-19 15:37:55] 2026-03-19 14:37:23,943 | INFO     | --- collectZombieJob: --- 10, [340721]
[2026-03-19 15:37:55] 2026-03-19 14:37:23,944 | INFO     | zombie collector waiting for pid 340721
[2026-03-19 15:37:55] 2026-03-19 14:37:23,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 15:37:55] 2026-03-19 14:37:23,944 | INFO     | collected zombie processes
[2026-03-19 15:37:55] 2026-03-19 14:37:23,944 | INFO     | will attempt to kill all subprocesses of pid=340721
[2026-03-19 15:37:55] 2026-03-19 14:37:24,304 | INFO     | process IDs to be killed: [340721] (in reverse order)
[2026-03-19 15:37:55] 2026-03-19 14:37:24,460 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 15:37:55] 2026-03-19 14:37:24,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 15:37:55] 2026-03-19 14:37:24,488 | INFO     | did not find any defunct processes belonging to 340721
[2026-03-19 15:37:55] 2026-03-19 14:37:24,514 | INFO     | did not find any defunct processes belonging to 340721
[2026-03-19 15:37:55] 2026-03-19 14:37:24,514 | INFO     | ready for new job
[2026-03-19 15:37:55] 2026-03-19 14:37:24,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 15:37:55] 2026-03-19 14:37:24,516 | INFO     | **************************************
[2026-03-19 15:37:55] 2026-03-19 14:37:24,516 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 15:37:55] 2026-03-19 14:37:24,516 | INFO     | **************************************
[2026-03-19 15:37:55] 2026-03-19 14:37:24,516 | INFO     | 
[2026-03-19 15:37:55] 2026-03-19 14:37:24,522 | INFO     | architecture information:
[2026-03-19 15:37:55] 2026-03-19 14:37:24,524 | INFO     | executing command: cat /etc/os-release
[2026-03-19 15:37:55] 2026-03-19 14:37:24,543 | INFO     | cat /etc/os-release:
[2026-03-19 15:37:55] NAME="CentOS Linux"
[2026-03-19 15:37:55] VERSION="7 (Core)"
[2026-03-19 15:37:55] ID="centos"
[2026-03-19 15:37:55] ID_LIKE="rhel fedora"
[2026-03-19 15:37:55] VERSION_ID="7"
[2026-03-19 15:37:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 15:37:55] ANSI_COLOR="0;31"
[2026-03-19 15:37:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 15:37:55] HOME_URL="https://www.centos.org/"
[2026-03-19 15:37:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 15:37:55] 
[2026-03-19 15:37:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 15:37:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 15:37:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 15:37:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 15:37:55] 
[2026-03-19 15:37:55] 2026-03-19 14:37:24,543 | INFO     | **************************************
[2026-03-19 15:37:55] 2026-03-19 14:37:25,045 | INFO     | executing command: df -mP /var/lib/boinc/var/slot144/slots/0
[2026-03-19 15:37:55] 2026-03-19 14:37:25,061 | INFO     | sufficient remaining disk space (278102278144 B)
[2026-03-19 15:37:55] 2026-03-19 14:37:25,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 15:37:55] 2026-03-19 14:37:25,062 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 15:37:55] 2026-03-19 14:37:25,062 | INFO     | update_server=False
[2026-03-19 15:37:55] 2026-03-19 14:37:25,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 15:37:55] 2026-03-19 14:37:25,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 15:37:55] 2026-03-19 14:37:25,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 15:37:55] 2026-03-19 14:37:25,224 | INFO     | aborting loop
[2026-03-19 15:37:55] 2026-03-19 14:37:25,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 15:37:55] 2026-03-19 14:37:25,953 | INFO     | all job control threads have been joined
[2026-03-19 15:37:55] 2026-03-19 14:37:25,991 | INFO     | all data control threads have been joined
[2026-03-19 15:37:55] 2026-03-19 14:37:26,034 | INFO     | all payload control threads have been joined
[2026-03-19 15:37:55] 2026-03-19 14:37:26,067 | INFO     | [job] retrieve thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:26,088 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:26,229 | INFO     | [job] job monitor thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:26,620 | INFO     | [payload] validate_post thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:26,864 | INFO     | [job] validate thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:26,946 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:26,958 | INFO     | [job] control thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:26,996 | INFO     | [data] control thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:27,039 | INFO     | [payload] control thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:27,067 | INFO     | [data] copytool_out thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:27,092 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:27,214 | INFO     | [data] copytool_in thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:27,270 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:27,439 | INFO     | [payload] failed_post thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:27,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 15:37:55] 2026-03-19 14:37:28,926 | INFO     | [job] queue monitor thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:29,346 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 15:37:55] 2026-03-19 14:37:36,049 | INFO     | [monitor] cgroup control has ended
[2026-03-19 15:37:55] 2026-03-19 14:37:37,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22398478219072)>', '<ExcThread(monitor, started 22398172628736)>']
[2026-03-19 15:37:55] 2026-03-19 14:37:42,529 | INFO     | all workflow threads have been joined
[2026-03-19 15:37:55] 2026-03-19 14:37:42,529 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 15:37:55] 2026-03-19 14:37:42,529 | INFO     | traces error code: 0
[2026-03-19 15:37:55] 2026-03-19 14:37:42,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 15:37:55] 2026-03-19 14:37:55,089 | INFO     | PID=337593 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-19 15:37:55] 2026-03-19 14:37:55,090 | INFO     | .. there are 15 such processes running
[2026-03-19 15:37:55] 2026-03-19 14:37:55,090 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 15:37:55] 2026-03-19 14:37:55,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 15:37:55] 2026-03-19 14:37:55,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 15:37:55] 2026-03-19 14:37:55,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 15:37:55] 2026-03-19 14:37:55,090 | INFO     | [monitor] control thread has ended
[2026-03-19 15:37:55] 2026-03-19 14:37:55,215 [wrapper] ==== pilot stdout END ====
[2026-03-19 15:37:55] 2026-03-19 14:37:55,218 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 15:37:55] 2026-03-19 14:37:55,220 [wrapper] pilotpid: 337593
[2026-03-19 15:37:55] 2026-03-19 14:37:55,221 [wrapper] Pilot exit status: 0
[2026-03-19 15:37:55] 2026-03-19 14:37:55,230 [wrapper] pandaids: 7056986304 7056986304
[2026-03-19 15:37:55] 2026-03-19 14:37:55,331 [wrapper] cleanup supervisor_pilot  634529 337594
[2026-03-19 15:37:55] 2026-03-19 14:37:55,333 [wrapper] Test setup, not cleaning
[2026-03-19 15:37:55] 2026-03-19 14:37:55,335 [wrapper] apfmon messages muted
[2026-03-19 15:37:55] 2026-03-19 14:37:55,336 [wrapper] ==== wrapper stdout END ====
[2026-03-19 15:37:55] 2026-03-19 14:37:55,337 [wrapper] ==== wrapper stderr END ====
[2026-03-19 15:37:55]  *** Error codes and diagnostics ***
[2026-03-19 15:37:55]     "exeErrorCode": 0,
[2026-03-19 15:37:55]     "exeErrorDiag": "",
[2026-03-19 15:37:55]     "pilotErrorCode": 0,
[2026-03-19 15:37:55]     "pilotErrorDiag": "",
[2026-03-19 15:37:55]  *** Listing of results directory ***
[2026-03-19 15:37:55] total 721896
[2026-03-19 15:37:55] drwx------. 5 boinc boinc      4096 Mar 10 17:00 pilot3
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc    585013 Mar 16 22:25 pilot3.tar.gz
[2026-03-19 15:37:55] -rwx------. 1 boinc boinc     36322 Mar 16 22:29 runpilot2-wrapper.sh
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc      5111 Mar 16 22:30 queuedata.json
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc       100 Mar 19 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 15:37:55] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 13:43 run_atlas
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc       105 Mar 19 13:43 job.xml
[2026-03-19 15:37:55] -rw-r--r--. 3 boinc boinc 243246677 Mar 19 13:43 EVNT.49137741._000015.pool.root.1
[2026-03-19 15:37:55] -rw-r--r--. 3 boinc boinc 243246677 Mar 19 13:43 ATLAS.root_0
[2026-03-19 15:37:55] -rw-r--r--. 2 boinc boinc     15845 Mar 19 13:43 start_atlas.sh
[2026-03-19 15:37:55] drwxrwx--x. 2 boinc boinc      4096 Mar 19 13:43 shared
[2026-03-19 15:37:55] -rw-r--r--. 2 boinc boinc    597555 Mar 19 13:43 input.tar.gz
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc         0 Mar 19 13:43 boinc_lockfile
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc   1511579 Mar 19 13:43 agis_ddmendpoints.agis.ALL.json
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc      6712 Mar 19 14:26 init_data.xml
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc      2633 Mar 19 14:26 pandaJob.out
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc   1010732 Mar 19 14:26 agis_schedconf.cvmfs.json
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc       445 Mar 19 14:26 workernode_map.json
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc 246772933 Mar 19 15:36 HITS.49182650._000359.pool.root.1
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc       529 Mar 19 15:36 boinc_task_state.xml
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc        97 Mar 19 15:37 pilot_heartbeat.json
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc      1026 Mar 19 15:37 memory_monitor_summary.json
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc    375975 Mar 19 15:37 log.49182650._000359.job.log.tgz.1
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc      6354 Mar 19 15:37 heartbeat.json
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc      8192 Mar 19 15:37 boinc_mmap_file
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc        27 Mar 19 15:37 wrapper_checkpoint.txt
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc       822 Mar 19 15:37 pilotlog.txt
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc    635243 Mar 19 15:37 log.49182650._000359.job.log.1
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc       357 Mar 19 15:37 output.list
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc       620 Mar 19 15:37 runtime_log
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc   1024000 Mar 19 15:37 result.tar.gz
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc       788 Mar 19 15:37 tjlNDmLgUM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfEzLDmJq13Cn.diag
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc      9300 Mar 19 15:37 runtime_log.err
[2026-03-19 15:37:55] -rw-r--r--. 1 boinc boinc     23275 Mar 19 15:37 stderr.txt
[2026-03-19 15:37:55] HITS file was successfully produced:
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc 246772933 Mar 19 15:36 shared/HITS.pool.root.1
[2026-03-19 15:37:55]  *** Contents of shared directory: ***
[2026-03-19 15:37:55] total 480144
[2026-03-19 15:37:55] -rw-r--r--. 3 boinc boinc 243246677 Mar 19 13:43 ATLAS.root_0
[2026-03-19 15:37:55] -rw-r--r--. 2 boinc boinc     15845 Mar 19 13:43 start_atlas.sh
[2026-03-19 15:37:55] -rw-r--r--. 2 boinc boinc    597555 Mar 19 13:43 input.tar.gz
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc 246772933 Mar 19 15:36 HITS.pool.root.1
[2026-03-19 15:37:55] -rw-------. 1 boinc boinc   1024000 Mar 19 15:37 result.tar.gz
15:37:56 (332741): run_atlas exited; CPU time 46527.180082
15:37:56 (332741): called boinc_finish(0)

</stderr_txt>
]]>

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