Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:46:48 (18698): wrapper (7.7.26015): starting
01:46:48 (18698): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 01:46:48] Arguments: --nthreads 8
[2026-03-18 01:46:48] Threads: 8
[2026-03-18 01:46:48] Checking for CVMFS
[2026-03-18 01:46:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 01:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 01:46:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 01:46:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 01:46:55] 2.11.2.0 28598 132633 136100 157394 3 53 22931976 25165825 4511 130560 161 43287551 99.842 27254060 914 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 01:46:55] CVMFS is ok
[2026-03-18 01:46:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 01:46:55] Checking for apptainer binary...
[2026-03-18 01:46:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 01:46:55] Running /usr/bin/apptainer --version
[2026-03-18 01:46:55] apptainer version 1.3.2-1.el7
[2026-03-18 01:46:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 01:47:00] cg-vwn446.simple-grid.lan
[2026-03-18 01:47:00] apptainer works
[2026-03-18 01:47:00] Set ATHENA_PROC_NUMBER=8
[2026-03-18 01:47:00] Set ATHENA_CORE_NUMBER=8
[2026-03-18 01:47:00] Starting ATLAS job with PandaID=7056975025
[2026-03-18 01:47:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 12:24:33]  *** The last 200 lines of the pilot log: ***
[2026-03-18 12:24:33] 2026-03-18 11:23:37,964 | INFO     | job 7056975025 has state=finished
[2026-03-18 12:24:33] 2026-03-18 11:23:37,964 | INFO     | preparing for final server update for job 7056975025 in state='finished'
[2026-03-18 12:24:33] 2026-03-18 11:23:37,964 | INFO     | reading metadata from: /var/lib/boinc/slots/6/PanDA_Pilot-7056975025/jobReport.json
[2026-03-18 12:24:33] 2026-03-18 11:23:37,967 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/6/workernode_map.json
[2026-03-18 12:24:33] 2026-03-18 11:23:37,967 | INFO     | this job has now completed (state=finished)
[2026-03-18 12:24:33] 2026-03-18 11:23:37,968 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 12:24:33] 2026-03-18 11:23:37,968 | INFO     | log transfer has been attempted: DONE
[2026-03-18 12:24:33] 2026-03-18 11:23:37,968 | INFO     | job 7056975025 has finished - writing final server update
[2026-03-18 12:24:33] 2026-03-18 11:23:37,968 | INFO     | total number of processed events: 400 (read)
[2026-03-18 12:24:33] 2026-03-18 11:23:37,973 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7056975025/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 12:24:33] 2026-03-18 11:23:37,974 | INFO     | extracted standard info from prmon json
[2026-03-18 12:24:33] 2026-03-18 11:23:37,975 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 12:24:33] 2026-03-18 11:23:37,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 12:24:33] 2026-03-18 11:23:37,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 12:24:33] 2026-03-18 11:23:37,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 12:24:33] 2026-03-18 11:23:37,988 | INFO     | fitting pss+swap vs Time
[2026-03-18 12:24:33] 2026-03-18 11:23:37,989 | INFO     | sum of square deviations: 72833767468.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,001 | INFO     | sum of deviations: 266697954819.99982
[2026-03-18 12:24:33] 2026-03-18 11:23:38,001 | INFO     | mean x: 1773814159.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,001 | INFO     | mean y: 2503299.8962722854
[2026-03-18 12:24:33] 2026-03-18 11:23:38,002 | INFO     | intersect: -6492734072.575302
[2026-03-18 12:24:33] 2026-03-18 11:23:38,002 | INFO     | chi2: 4.433615548277029
[2026-03-18 12:24:33] 2026-03-18 11:23:38,004 | INFO     | sum of square deviations: 71077399653.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,016 | INFO     | sum of deviations: 305297802122.0001
[2026-03-18 12:24:33] 2026-03-18 11:23:38,016 | INFO     | mean x: 1773814006.5
[2026-03-18 12:24:33] 2026-03-18 11:23:38,017 | INFO     | mean y: 2506627.6470588236
[2026-03-18 12:24:33] 2026-03-18 11:23:38,017 | INFO     | intersect: -7616532901.1128
[2026-03-18 12:24:33] 2026-03-18 11:23:38,018 | INFO     | chi2: 3.6658770103973746
[2026-03-18 12:24:33] 2026-03-18 11:23:38,018 | INFO     | current chi2=3.6658770103973746 (change=17.31630831586219 %)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,018 | INFO     | right removable region: 611
[2026-03-18 12:24:33] 2026-03-18 11:23:38,019 | INFO     | sum of square deviations: 71077399653.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,031 | INFO     | sum of deviations: 75110150553.5
[2026-03-18 12:24:33] 2026-03-18 11:23:38,032 | INFO     | mean x: 1773814311.5
[2026-03-18 12:24:33] 2026-03-18 11:23:38,032 | INFO     | mean y: 2519920.982026144
[2026-03-18 12:24:33] 2026-03-18 11:23:38,032 | INFO     | intersect: -1871936103.593355
[2026-03-18 12:24:33] 2026-03-18 11:23:38,033 | INFO     | chi2: 0.9508612288899354
[2026-03-18 12:24:33] 2026-03-18 11:23:38,033 | INFO     | current chi2=0.9508612288899354 (change=78.5533675949992 %)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,034 | INFO     | sum of square deviations: 69349497488.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,046 | INFO     | sum of deviations: 43853153760.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,046 | INFO     | mean x: 1773814464.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,046 | INFO     | mean y: 2522670.927512356
[2026-03-18 12:24:33] 2026-03-18 11:23:38,047 | INFO     | intersect: -1119148880.4051275
[2026-03-18 12:24:33] 2026-03-18 11:23:38,047 | INFO     | chi2: 0.8260136062670234
[2026-03-18 12:24:33] 2026-03-18 11:23:38,048 | INFO     | current chi2=0.8260136062670234 (change=13.129951966667416 %)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,048 | INFO     | left removable region: 20
[2026-03-18 12:24:33] 2026-03-18 11:23:38,049 | INFO     | sum of square deviations: 64008790840.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,060 | INFO     | sum of deviations: 86019900727.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,060 | INFO     | mean x: 1773814586.0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,061 | INFO     | mean y: 2525915.257191201
[2026-03-18 12:24:33] 2026-03-18 11:23:38,061 | INFO     | intersect: -2381261570.7028327
[2026-03-18 12:24:33] 2026-03-18 11:23:38,062 | INFO     | chi2: 0.007383212210960384
[2026-03-18 12:24:33] 2026-03-18 11:23:38,062 | INFO     | current memory leak: 1.34 B/s (using 591 data points, chi2=0.01)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,063 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,063 | INFO     | ..............................
[2026-03-18 12:24:33] 2026-03-18 11:23:38,063 | INFO     | . Timing measurements:
[2026-03-18 12:24:33] 2026-03-18 11:23:38,063 | INFO     | . get job = 0 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,063 | INFO     | . initial setup = 101 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,063 | INFO     | . payload setup = 114 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,064 | INFO     | . stage-in = 0 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,064 | INFO     | . payload execution = 37751 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,064 | INFO     | . stage-out = 4 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,064 | INFO     | . log creation = 1 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,064 | INFO     | ..............................
[2026-03-18 12:24:33] 2026-03-18 11:23:38,159 | INFO     | time since job start (37882s) is within the limit (345600.0s)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,226 | INFO     | 
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | job summary report
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | --------------------------------------------------
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | PanDA job id: 7056975025
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | task id: 49181388
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | errors: (none)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | pilot state: finished 
[2026-03-18 12:24:33] 2026-03-18 11:23:38,227 | INFO     | transexitcode: 0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | exeerrorcode: 0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | exeerrordiag: 
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | exitcode: 0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | exitmsg: OK
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | cpuconsumptiontime: 150962 s
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | nevents: 400
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | neventsw: 0
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | pid: 27256
[2026-03-18 12:24:33] 2026-03-18 11:23:38,228 | INFO     | pgrp: 27256
[2026-03-18 12:24:33] 2026-03-18 11:23:38,229 | INFO     | corecount: 8
[2026-03-18 12:24:33] 2026-03-18 11:23:38,229 | INFO     | event service: False
[2026-03-18 12:24:33] 2026-03-18 11:23:38,229 | INFO     | sizes: {0: 2279864, 1: 2280325, 2: 2280325, 37869: 2321335, 37870: 2321334, 37876: 2330388, 37878: 2330572, 37879: 2330766}
[2026-03-18 12:24:33] 2026-03-18 11:23:38,229 | INFO     | --------------------------------------------------
[2026-03-18 12:24:33] 2026-03-18 11:23:38,229 | INFO     | 
[2026-03-18 12:24:33] 2026-03-18 11:23:38,229 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-18 12:24:33] 2026-03-18 11:23:38,589 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,589 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,591 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,592 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 12:24:33] 2026-03-18 11:23:38,592 | INFO     | job 7056975025 has completed (purged errors)
[2026-03-18 12:24:33] 2026-03-18 11:23:38,592 | INFO     | overall cleanup function is called
[2026-03-18 12:24:33] 2026-03-18 11:23:39,601 | INFO     | --- collectZombieJob: --- 10, [27256]
[2026-03-18 12:24:33] 2026-03-18 11:23:39,602 | INFO     | zombie collector waiting for pid 27256
[2026-03-18 12:24:33] 2026-03-18 11:23:39,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 12:24:33] 2026-03-18 11:23:39,602 | INFO     | collected zombie processes
[2026-03-18 12:24:33] 2026-03-18 11:23:39,602 | INFO     | will attempt to kill all subprocesses of pid=27256
[2026-03-18 12:24:33] 2026-03-18 11:23:39,734 | INFO     | process IDs to be killed: [27256] (in reverse order)
[2026-03-18 12:24:33] 2026-03-18 11:23:40,523 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 12:24:33] 2026-03-18 11:23:40,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 12:24:33] 2026-03-18 11:23:40,527 | INFO     | did not find any defunct processes belonging to 27256
[2026-03-18 12:24:33] 2026-03-18 11:23:40,530 | INFO     | did not find any defunct processes belonging to 27256
[2026-03-18 12:24:33] 2026-03-18 11:23:40,530 | INFO     | ready for new job
[2026-03-18 12:24:33] 2026-03-18 11:23:40,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 12:24:33] 2026-03-18 11:23:40,533 | INFO     | **************************************
[2026-03-18 12:24:33] 2026-03-18 11:23:40,533 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 12:24:33] 2026-03-18 11:23:40,534 | INFO     | **************************************
[2026-03-18 12:24:33] 2026-03-18 11:23:40,534 | INFO     | 
[2026-03-18 12:24:33] 2026-03-18 11:23:40,534 | INFO     | pilot is running in a VM
[2026-03-18 12:24:33] 2026-03-18 11:23:40,534 | INFO     | architecture information:
[2026-03-18 12:24:33] 2026-03-18 11:23:40,544 | INFO     | executing command: cat /etc/os-release
[2026-03-18 12:24:33] 2026-03-18 11:23:40,827 | INFO     | cat /etc/os-release:
[2026-03-18 12:24:33] NAME="CentOS Linux"
[2026-03-18 12:24:33] VERSION="7 (Core)"
[2026-03-18 12:24:33] ID="centos"
[2026-03-18 12:24:33] ID_LIKE="rhel fedora"
[2026-03-18 12:24:33] VERSION_ID="7"
[2026-03-18 12:24:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 12:24:33] ANSI_COLOR="0;31"
[2026-03-18 12:24:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 12:24:33] HOME_URL="https://www.centos.org/"
[2026-03-18 12:24:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 12:24:33] 
[2026-03-18 12:24:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 12:24:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 12:24:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 12:24:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 12:24:33] 
[2026-03-18 12:24:33] 2026-03-18 11:23:40,827 | INFO     | **************************************
[2026-03-18 12:24:33] 2026-03-18 11:23:41,331 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-18 12:24:33] 2026-03-18 11:23:41,563 | INFO     | sufficient remaining disk space (495352545280 B)
[2026-03-18 12:24:33] 2026-03-18 11:23:41,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 12:24:33] 2026-03-18 11:23:41,564 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 12:24:33] 2026-03-18 11:23:41,564 | INFO     | update_server=False
[2026-03-18 12:24:33] 2026-03-18 11:23:41,564 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 12:24:33] 2026-03-18 11:23:41,573 | INFO     | all job control threads have been joined
[2026-03-18 12:24:33] 2026-03-18 11:23:41,861 | INFO     | all data control threads have been joined
[2026-03-18 12:24:33] 2026-03-18 11:23:42,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 12:24:33] 2026-03-18 11:23:42,100 | INFO     | aborting loop
[2026-03-18 12:24:33] 2026-03-18 11:23:42,303 | INFO     | all payload control threads have been joined
[2026-03-18 12:24:33] 2026-03-18 11:23:42,570 | INFO     | [job] retrieve thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:42,580 | INFO     | [job] control thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:42,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 12:24:33] 2026-03-18 11:23:42,620 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:42,737 | INFO     | [payload] validate_post thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:42,843 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:42,847 | INFO     | [job] validate thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:42,868 | INFO     | [data] control thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:42,946 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:43,106 | INFO     | [job] job monitor thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:43,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 12:24:33] 2026-03-18 11:23:43,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 12:24:33] 2026-03-18 11:23:43,304 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:43,310 | INFO     | [payload] control thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:43,697 | INFO     | [payload] failed_post thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:43,949 | INFO     | [data] copytool_in thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:44,248 | INFO     | [job] queue monitor thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:44,594 | INFO     | [data] copytool_out thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:23:47,218 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 12:24:33] 2026-03-18 11:24:11,368 | INFO     | PID=22780 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 12:24:33] 2026-03-18 11:24:11,370 | INFO     | .. there are 9 such processes running
[2026-03-18 12:24:33] 2026-03-18 11:24:11,372 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 12:24:33] 2026-03-18 11:24:11,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 12:24:33] 2026-03-18 11:24:11,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 12:24:33] 2026-03-18 11:24:22,056 | INFO     | [monitor] cgroup control has ended
[2026-03-18 12:24:33] 2026-03-18 11:24:23,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811965835072)>', '<ExcThread(monitor, started 139811302135552)>']
[2026-03-18 12:24:33] 2026-03-18 11:24:24,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 12:24:33] 2026-03-18 11:24:24,448 | INFO     | [monitor] control thread has ended
[2026-03-18 12:24:33] 2026-03-18 11:24:28,912 | INFO     | all workflow threads have been joined
[2026-03-18 12:24:33] 2026-03-18 11:24:28,913 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 12:24:33] 2026-03-18 11:24:28,913 | INFO     | traces error code: 0
[2026-03-18 12:24:33] 2026-03-18 11:24:28,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 12:24:33] 2026-03-18 11:24:29,251 [wrapper] ==== pilot stdout END ====
[2026-03-18 12:24:33] 2026-03-18 11:24:29,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 12:24:33] 2026-03-18 11:24:29,412 [wrapper] pilotpid: 22780
[2026-03-18 12:24:33] 2026-03-18 11:24:29,492 [wrapper] Pilot exit status: 0
[2026-03-18 12:24:33] 2026-03-18 11:24:29,869 [wrapper] pandaids: 7056975025
[2026-03-18 12:24:33] 2026-03-18 11:24:30,671 [wrapper] cleanup supervisor_pilot  7886 22781
[2026-03-18 12:24:33] 2026-03-18 11:24:30,726 [wrapper] Test setup, not cleaning
[2026-03-18 12:24:33] 2026-03-18 11:24:30,808 [wrapper] apfmon messages muted
[2026-03-18 12:24:33] 2026-03-18 11:24:30,904 [wrapper] ==== wrapper stdout END ====
[2026-03-18 12:24:33] 2026-03-18 11:24:31,000 [wrapper] ==== wrapper stderr END ====
[2026-03-18 12:24:33]  *** Error codes and diagnostics ***
[2026-03-18 12:24:33]     "exeErrorCode": 0,
[2026-03-18 12:24:33]     "exeErrorDiag": "",
[2026-03-18 12:24:33]     "pilotErrorCode": 0,
[2026-03-18 12:24:33]     "pilotErrorDiag": "",
[2026-03-18 12:24:33]  *** Listing of results directory ***
[2026-03-18 12:24:33] total 488020
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-18 12:24:33] -rwx------. 1 boinc boinc     36322 Mar 16 17:41 runpilot2-wrapper.sh
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc      5111 Mar 16 17:43 queuedata.json
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc       100 Mar 18 01:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 12:24:33] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 01:46 run_atlas
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc       105 Mar 18 01:46 job.xml
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc      6392 Mar 18 01:46 init_data.xml
[2026-03-18 12:24:33] -rw-r--r--. 2 boinc boinc 240027712 Mar 18 01:46 EVNT.49134998._000004.pool.root.1
[2026-03-18 12:24:33] -rw-r--r--. 2 boinc boinc     15845 Mar 18 01:46 start_atlas.sh
[2026-03-18 12:24:33] drwxrwx--x. 2 boinc boinc        68 Mar 18 01:46 shared
[2026-03-18 12:24:33] -rw-r--r--. 2 boinc boinc    597540 Mar 18 01:46 input.tar.gz
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc         0 Mar 18 01:46 boinc_lockfile
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc      2610 Mar 18 01:47 pandaJob.out
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc       415 Mar 18 01:52 workernode_map.json
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc   1011515 Mar 18 01:52 agis_schedconf.cvmfs.json
[2026-03-18 12:24:33] drwx------. 5 boinc boinc      4096 Mar 18 01:52 pilot3
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc 243787559 Mar 18 12:22 HITS.49181388._000098.pool.root.1
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc       531 Mar 18 12:22 boinc_task_state.xml
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc      1014 Mar 18 12:23 memory_monitor_summary.json
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc   1511579 Mar 18 12:23 agis_ddmendpoints.agis.ALL.json
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc    795114 Mar 18 12:23 log.49181388._000098.job.log.tgz.1
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc      6311 Mar 18 12:23 heartbeat.json
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc        95 Mar 18 12:24 pilot_heartbeat.json
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc        29 Mar 18 12:24 wrapper_checkpoint.txt
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc      8192 Mar 18 12:24 boinc_mmap_file
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc      4880 Mar 18 12:24 pilotlog.txt
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc   5200346 Mar 18 12:24 log.49181388._000098.job.log.1
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc       357 Mar 18 12:24 output.list
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc       620 Mar 18 12:24 runtime_log
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc   6010880 Mar 18 12:24 result.tar.gz
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc       658 Mar 18 12:24 ZpeKDmaBQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZNvLDmxAW6tn.diag
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc      8816 Mar 18 12:24 runtime_log.err
[2026-03-18 12:24:33] -rw-r--r--. 1 boinc boinc     20925 Mar 18 12:24 stderr.txt
[2026-03-18 12:24:33] HITS file was successfully produced:
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc 243787559 Mar 18 12:22 shared/HITS.pool.root.1
[2026-03-18 12:24:33]  *** Contents of shared directory: ***
[2026-03-18 12:24:33] total 478952
[2026-03-18 12:24:33] -rw-r--r--. 2 boinc boinc 240027712 Mar 18 01:46 ATLAS.root_0
[2026-03-18 12:24:33] -rw-r--r--. 2 boinc boinc     15845 Mar 18 01:46 start_atlas.sh
[2026-03-18 12:24:33] -rw-r--r--. 2 boinc boinc    597540 Mar 18 01:46 input.tar.gz
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc 243787559 Mar 18 12:22 HITS.pool.root.1
[2026-03-18 12:24:33] -rw-------. 1 boinc boinc   6010880 Mar 18 12:24 result.tar.gz
12:24:35 (18698): run_atlas exited; CPU time 151581.484171
12:24:35 (18698): called boinc_finish(0)

</stderr_txt>
]]>

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