Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:12:40 (1154829): wrapper (7.7.26015): starting
17:12:40 (1154829): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 17:12:40] Arguments: --nthreads 8
[2026-03-16 17:12:40] Threads: 8
[2026-03-16 17:12:40] Checking for CVMFS
[2026-03-16 17:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 17:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 17:12:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 17:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 17:12:42] 2.13.3.0 7100 188911 342840 157351 0 1369 21057505 40960000 54263 16776704 0 2101626821 99.735 1444899864 46219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-16 17:12:42] CVMFS is ok
[2026-03-16 17:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 17:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 17:12:42] Further information can be found at the LHC@home message board.
[2026-03-16 17:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 17:12:42] Checking for apptainer binary...
[2026-03-16 17:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 17:12:42] Running /usr/bin/apptainer --version
[2026-03-16 17:12:42] apptainer version 1.4.5-2.el9
[2026-03-16 17:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 17:12:42] c8-6-10.aglt2.org
[2026-03-16 17:12:42] apptainer works
[2026-03-16 17:12:43] Set ATHENA_PROC_NUMBER=8
[2026-03-16 17:12:43] Set ATHENA_CORE_NUMBER=8
[2026-03-16 17:12:43] Starting ATLAS job with PandaID=7056970687
[2026-03-16 17:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 00:28:40]  *** The last 200 lines of the pilot log: ***
[2026-03-17 00:28:40] 2026-03-17 04:27:55,165 | INFO     | mean x: 1773708721.1741176
[2026-03-17 00:28:40] 2026-03-17 04:27:55,165 | INFO     | mean y: 2527886.8211764707
[2026-03-17 00:28:40] 2026-03-17 04:27:55,165 | INFO     | intersect: -7589940694.0106535
[2026-03-17 00:28:40] 2026-03-17 04:27:55,165 | INFO     | chi2: 4.7992293175949
[2026-03-17 00:28:40] 2026-03-17 04:27:55,166 | INFO     | sum of square deviations: 22972976149.961945
[2026-03-17 00:28:40] 2026-03-17 04:27:55,168 | INFO     | sum of deviations: 158127591496.99063
[2026-03-17 00:28:40] 2026-03-17 04:27:55,168 | INFO     | mean x: 1773708568.6761904
[2026-03-17 00:28:40] 2026-03-17 04:27:55,168 | INFO     | mean y: 2538141.919047619
[2026-03-17 00:28:40] 2026-03-17 04:27:55,168 | INFO     | intersect: -12206252837.16379
[2026-03-17 00:28:40] 2026-03-17 04:27:55,169 | INFO     | chi2: 3.3019327524130175
[2026-03-17 00:28:40] 2026-03-17 04:27:55,169 | INFO     | current chi2=3.3019327524130175 (change=31.198687666215584 %)
[2026-03-17 00:28:40] 2026-03-17 04:27:55,169 | INFO     | sum of square deviations: 22162197149.5085
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | sum of deviations: 157109566143.33258
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | mean x: 1773708416.1734939
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | mean y: 2537950.4120481927
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | intersect: -12571421113.749392
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | chi2: 3.3017150671609876
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | current chi2=3.3017150671609876 (change=0.006592661581942815 %)
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | right removable region: 414
[2026-03-17 00:28:40] 2026-03-17 04:27:55,172 | INFO     | sum of square deviations: 22972931009.96194
[2026-03-17 00:28:40] 2026-03-17 04:27:55,175 | INFO     | sum of deviations: -17266241468.39993
[2026-03-17 00:28:41] 2026-03-17 04:27:55,175 | INFO     | mean x: 1773708873.6761904
[2026-03-17 00:28:41] 2026-03-17 04:27:55,175 | INFO     | mean y: 2549725.85
[2026-03-17 00:28:41] 2026-03-17 04:27:55,175 | INFO     | intersect: 1335652832.904841
[2026-03-17 00:28:41] 2026-03-17 04:27:55,175 | INFO     | chi2: 1.809166212582205
[2026-03-17 00:28:41] 2026-03-17 04:27:55,175 | INFO     | current chi2=1.809166212582205 (change=62.302984649025774 %)
[2026-03-17 00:28:41] 2026-03-17 04:27:55,176 | INFO     | sum of square deviations: 22162158354.804813
[2026-03-17 00:28:41] 2026-03-17 04:27:55,178 | INFO     | sum of deviations: -42297918242.09159
[2026-03-17 00:28:41] 2026-03-17 04:27:55,178 | INFO     | mean x: 1773709026.1783133
[2026-03-17 00:28:41] 2026-03-17 04:27:55,178 | INFO     | mean y: 2554429.8120481926
[2026-03-17 00:28:41] 2026-03-17 04:27:55,178 | INFO     | intersect: 3387793275.8418956
[2026-03-17 00:28:41] 2026-03-17 04:27:55,178 | INFO     | chi2: 1.685432251786842
[2026-03-17 00:28:41] 2026-03-17 04:27:55,178 | INFO     | current chi2=1.685432251786842 (change=6.839280986723639 %)
[2026-03-17 00:28:41] 2026-03-17 04:27:55,178 | INFO     | left removable region: 20
[2026-03-17 00:28:41] 2026-03-17 04:27:55,179 | INFO     | sum of square deviations: 18965064019.70571
[2026-03-17 00:28:41] 2026-03-17 04:27:55,181 | INFO     | sum of deviations: -17443135959.64467
[2026-03-17 00:28:41] 2026-03-17 04:27:55,181 | INFO     | mean x: 1773708995.680203
[2026-03-17 00:28:41] 2026-03-17 04:27:55,181 | INFO     | mean y: 2572096.5583756347
[2026-03-17 00:28:41] 2026-03-17 04:27:55,181 | INFO     | intersect: 1633942659.417919
[2026-03-17 00:28:41] 2026-03-17 04:27:55,181 | INFO     | chi2: 0.019431945208468505
[2026-03-17 00:28:41] 2026-03-17 04:27:55,181 | INFO     | current memory leak: -0.92 B/s (using 394 data points, chi2=0.02)
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | could have reported an average CPU frequency of 3799 MHz (18 samples)
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | ..............................
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . Timing measurements:
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . get job = 0 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . initial setup = 39 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . payload setup = 48 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . stage-in = 1 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . payload execution = 25912 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . stage-out = 5 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,182 | INFO     | . log creation = 0 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,183 | INFO     | ..............................
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | 
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | job summary report
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | --------------------------------------------------
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | PanDA job id: 7056970687
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | task id: 49180885
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | errors: (none)
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | pilot state: finished 
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | transexitcode: 0
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | exeerrorcode: 0
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | exeerrordiag: 
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | exitcode: 0
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | exitmsg: OK
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | cpuconsumptiontime: 64750 s
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | nevents: 400
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | neventsw: 0
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | pid: 1175936
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | pgrp: 1175936
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | corecount: 8
[2026-03-17 00:28:41] 2026-03-17 04:27:55,373 | INFO     | event service: False
[2026-03-17 00:28:41] 2026-03-17 04:27:55,374 | INFO     | sizes: {0: 2279814, 1: 2279898, 2: 2280271, 3: 2280387, 14: 2280387, 25966: 2316108, 25972: 2325106, 25973: 2325356}
[2026-03-17 00:28:41] 2026-03-17 04:27:55,374 | INFO     | --------------------------------------------------
[2026-03-17 00:28:41] 2026-03-17 04:27:55,374 | INFO     | 
[2026-03-17 00:28:41] 2026-03-17 04:27:55,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | job 7056970687 has completed (purged errors)
[2026-03-17 00:28:41] 2026-03-17 04:27:55,592 | INFO     | overall cleanup function is called
[2026-03-17 00:28:41] 2026-03-17 04:27:56,602 | INFO     | --- collectZombieJob: --- 10, [1175936]
[2026-03-17 00:28:41] 2026-03-17 04:27:56,602 | INFO     | zombie collector waiting for pid 1175936
[2026-03-17 00:28:41] 2026-03-17 04:27:56,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 00:28:41] 2026-03-17 04:27:56,602 | INFO     | collected zombie processes
[2026-03-17 00:28:41] 2026-03-17 04:27:56,602 | INFO     | will attempt to kill all subprocesses of pid=1175936
[2026-03-17 00:28:41] 2026-03-17 04:27:56,729 | WARNING  | process 1175936 can no longer be monitored (due to stat problems) - aborting
[2026-03-17 00:28:41] 2026-03-17 04:27:59,029 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 00:28:41] 2026-03-17 04:27:59,029 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-17 00:28:41] 2026-03-17 04:27:59,030 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-17 00:28:41] 2026-03-17 04:27:59,030 | WARNING  | maxPSS not found in memory monitor output
[2026-03-17 00:28:41] 2026-03-17 04:27:59,030 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/5/PanDA_Pilot-7056970687/payload.stdout) since it has not been created yet
[2026-03-17 00:28:41] 2026-03-17 04:27:59,030 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-17 00:28:41] 2026-03-17 04:27:59,081 | INFO     | sufficient remaining disk space (167760625664 B)
[2026-03-17 00:28:41] 2026-03-17 04:27:59,081 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-17 00:28:41] 2026-03-17 04:27:59,081 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-7056970687/HITS.49180885._000162.pool.root.1 since it does not exist
[2026-03-17 00:28:41] 2026-03-17 04:27:59,408 | INFO     | process IDs to be killed: [1175936] (in reverse order)
[2026-03-17 00:28:41] 2026-03-17 04:28:00,053 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 00:28:41] 2026-03-17 04:28:00,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 00:28:41] 2026-03-17 04:28:00,485 | INFO     | did not find any defunct processes belonging to 1175936
[2026-03-17 00:28:41] 2026-03-17 04:28:00,952 | INFO     | did not find any defunct processes belonging to 1175936
[2026-03-17 00:28:41] 2026-03-17 04:28:01,047 | INFO     | ready for new job
[2026-03-17 00:28:41] 2026-03-17 04:28:01,047 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 00:28:41] 2026-03-17 04:28:01,049 | INFO     | **************************************
[2026-03-17 00:28:41] 2026-03-17 04:28:01,049 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 00:28:41] 2026-03-17 04:28:01,049 | INFO     | **************************************
[2026-03-17 00:28:41] 2026-03-17 04:28:01,049 | INFO     | 
[2026-03-17 00:28:41] 2026-03-17 04:28:01,117 | INFO     | architecture information:
[2026-03-17 00:28:41] 2026-03-17 04:28:01,122 | INFO     | executing command: cat /etc/os-release
[2026-03-17 00:28:41] 2026-03-17 04:28:01,187 | INFO     | number of running child processes to parent process 1175936: 1
[2026-03-17 00:28:41] 2026-03-17 04:28:01,187 | INFO     | maximum number of monitored processes: 6
[2026-03-17 00:28:41] 2026-03-17 04:28:01,187 | INFO     | aborting job monitoring since job object (job id=7056970687) has expired
[2026-03-17 00:28:41] 2026-03-17 04:28:01,187 | INFO     | cat /etc/os-release:
[2026-03-17 00:28:41] NAME="CentOS Linux"
[2026-03-17 00:28:41] VERSION="7 (Core)"
[2026-03-17 00:28:41] ID="centos"
[2026-03-17 00:28:41] ID_LIKE="rhel fedora"
[2026-03-17 00:28:41] VERSION_ID="7"
[2026-03-17 00:28:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 00:28:41] ANSI_COLOR="0;31"
[2026-03-17 00:28:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 00:28:41] HOME_URL="https://www.centos.org/"
[2026-03-17 00:28:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 00:28:41] 
[2026-03-17 00:28:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 00:28:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 00:28:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 00:28:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 00:28:41] 
[2026-03-17 00:28:41] 2026-03-17 04:28:01,187 | INFO     | **************************************
[2026-03-17 00:28:41] 2026-03-17 04:28:01,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-17 00:28:41] 2026-03-17 04:28:01,777 | INFO     | sufficient remaining disk space (167759577088 B)
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | INFO     | update_server=False
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | INFO     | will abort loop
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 00:28:41] 2026-03-17 04:28:01,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 00:28:41] 2026-03-17 04:28:02,342 | INFO     | all data control threads have been joined
[2026-03-17 00:28:41] 2026-03-17 04:28:02,791 | INFO     | [job] retrieve thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:02,791 | INFO     | [job] job monitor thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:02,845 | INFO     | all payload control threads have been joined
[2026-03-17 00:28:41] 2026-03-17 04:28:02,944 | INFO     | [data] copytool_in thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:02,944 | INFO     | [job] validate thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:02,945 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:02,945 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:02,945 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:03,348 | INFO     | [data] control thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:03,457 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:03,459 | INFO     | [payload] failed_post thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:03,470 | INFO     | all job control threads have been joined
[2026-03-17 00:28:41] 2026-03-17 04:28:03,805 | INFO     | [data] copytool_out thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:03,851 | INFO     | [payload] control thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:04,029 | INFO     | [payload] validate_post thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:04,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 00:28:41] 2026-03-17 04:28:04,490 | INFO     | [job] control thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:05,484 | INFO     | [job] queue monitor thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:05,820 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 00:28:41] 2026-03-17 04:28:32,115 | INFO     | PID=1166443 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-17 00:28:41] 2026-03-17 04:28:32,115 | INFO     | .. there are 93 such processes running
[2026-03-17 00:28:41] 2026-03-17 04:28:32,115 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 00:28:41] 2026-03-17 04:28:32,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 00:28:41] 2026-03-17 04:28:32,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 00:28:41] 2026-03-17 04:28:32,316 | INFO     | [monitor] cgroup control has ended
[2026-03-17 00:28:41] 2026-03-17 04:28:33,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998983898944)>', '<ExcThread(monitor, started 139998351324928)>']
[2026-03-17 00:28:41] 2026-03-17 04:28:34,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 00:28:41] 2026-03-17 04:28:34,127 | INFO     | [monitor] control thread has ended
[2026-03-17 00:28:41] 2026-03-17 04:28:38,909 | INFO     | all workflow threads have been joined
[2026-03-17 00:28:41] 2026-03-17 04:28:38,939 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 00:28:41] 2026-03-17 04:28:38,939 | INFO     | traces error code: 0
[2026-03-17 00:28:41] 2026-03-17 04:28:38,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 00:28:41] 2026-03-17 04:28:39,543 [wrapper] ==== pilot stdout END ====
[2026-03-17 00:28:41] 2026-03-17 04:28:39,557 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 00:28:41] 2026-03-17 04:28:39,575 [wrapper] pilotpid: 1166443
[2026-03-17 00:28:41] 2026-03-17 04:28:39,594 [wrapper] Pilot exit status: 0
[2026-03-17 00:28:41] 2026-03-17 04:28:39,703 [wrapper] pandaids: 7056970687
[2026-03-17 00:28:41] 2026-03-17 04:28:39,980 [wrapper] cleanup supervisor_pilot 3420122 1166444
[2026-03-17 00:28:41] 2026-03-17 04:28:40,014 [wrapper] Test setup, not cleaning
[2026-03-17 00:28:41] 2026-03-17 04:28:40,026 [wrapper] apfmon messages muted
[2026-03-17 00:28:41] 2026-03-17 04:28:40,081 [wrapper] ==== wrapper stdout END ====
[2026-03-17 00:28:41] 2026-03-17 04:28:40,092 [wrapper] ==== wrapper stderr END ====
[2026-03-17 00:28:41]  *** Error codes and diagnostics ***
[2026-03-17 00:28:41]     "exeErrorCode": 0,
[2026-03-17 00:28:41]     "exeErrorDiag": "",
[2026-03-17 00:28:41]     "pilotErrorCode": 0,
[2026-03-17 00:28:41]     "pilotErrorDiag": "",
[2026-03-17 00:28:41]  *** Listing of results directory ***
[2026-03-17 00:28:41] total 494856
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 12:03 pilot3.tar.gz
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 12:40 queuedata.json
[2026-03-17 00:28:41] -rwx------. 1 boincer umatlas     36322 Mar 16 12:40 runpilot2-wrapper.sh
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas       100 Mar 16 17:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 00:28:41] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 16 17:12 run_atlas
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas       105 Mar 16 17:12 job.xml
[2026-03-17 00:28:41] -rw-r--r--. 2 boincer umatlas 242456650 Mar 16 17:12 EVNT.49134059._000007.pool.root.1
[2026-03-17 00:28:41] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 17:12 start_atlas.sh
[2026-03-17 00:28:41] drwxrwx--x. 2 boincer umatlas      4096 Mar 16 17:12 shared
[2026-03-17 00:28:41] -rw-r--r--. 2 boincer umatlas    597537 Mar 16 17:12 input.tar.gz
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas         0 Mar 16 17:12 boinc_lockfile
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas      2614 Mar 16 17:12 pandaJob.out
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas        57 Mar 16 17:12 setup.sh.local
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas   1006429 Mar 16 17:14 agis_schedconf.cvmfs.json
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas       430 Mar 16 17:14 workernode_map.json
[2026-03-17 00:28:41] drwx------. 5 boincer umatlas      4096 Mar 16 17:14 pilot3
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas      7173 Mar 17 00:22 init_data.xml
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas 252992960 Mar 17 00:25 HITS.49180885._000162.pool.root.1
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas       530 Mar 17 00:25 boinc_task_state.xml
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas        95 Mar 17 00:27 pilot_heartbeat.json
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas      1050 Mar 17 00:27 memory_monitor_summary.json
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas   1511579 Mar 17 00:27 agis_ddmendpoints.agis.ALL.json
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas    591304 Mar 17 00:27 log.49180885._000162.job.log.tgz.1
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas      6351 Mar 17 00:27 heartbeat.json
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas      8192 Mar 17 00:28 boinc_mmap_file
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas        28 Mar 17 00:28 wrapper_checkpoint.txt
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas      5111 Mar 17 00:28 pilotlog.txt
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas   3080916 Mar 17 00:28 log.49180885._000162.job.log.1
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas       357 Mar 17 00:28 output.list
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas       620 Mar 17 00:28 runtime_log
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas   3686400 Mar 17 00:28 result.tar.gz
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas      9337 Mar 17 00:28 runtime_log.err
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas       661 Mar 17 00:28 9hzKDmrAQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxHvLDm2m8ZKm.diag
[2026-03-17 00:28:41] -rw-r--r--. 1 boincer umatlas     21520 Mar 17 00:28 stderr.txt
[2026-03-17 00:28:41] HITS file was successfully produced:
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas 252992960 Mar 17 00:25 shared/HITS.pool.root.1
[2026-03-17 00:28:41]  *** Contents of shared directory: ***
[2026-03-17 00:28:41] total 488048
[2026-03-17 00:28:41] -rw-r--r--. 2 boincer umatlas 242456650 Mar 16 17:12 ATLAS.root_0
[2026-03-17 00:28:41] -rw-r--r--. 2 boincer umatlas     15845 Mar 16 17:12 start_atlas.sh
[2026-03-17 00:28:41] -rw-r--r--. 2 boincer umatlas    597537 Mar 16 17:12 input.tar.gz
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas 252992960 Mar 17 00:25 HITS.pool.root.1
[2026-03-17 00:28:41] -rw-------. 1 boincer umatlas   3686400 Mar 17 00:28 result.tar.gz
00:28:42 (1154829): run_atlas exited; CPU time 65910.280635
00:28:42 (1154829): called boinc_finish(0)

</stderr_txt>
]]>

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