Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:35 (3319259): wrapper (7.7.26015): starting
13:54:35 (3319259): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 13:54:35] Arguments: --nthreads 12
[2026-03-16 13:54:35] Threads: 12
[2026-03-16 13:54:35] Checking for CVMFS
[2026-03-16 13:54:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 13:54:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 13:54:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 13:54:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 13:54:37] 2.11.5.0 3306151 152118 285056 157351 0 977 44890460 45568000 22101 130560 0 916639704 99.823 511229337 21962 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-16 13:54:37] CVMFS is ok
[2026-03-16 13:54:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 13:54:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 13:54:37] Further information can be found at the LHC@home message board.
[2026-03-16 13:54:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 13:54:37] Checking for apptainer binary...
[2026-03-16 13:54:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 13:54:37] Running /usr/bin/apptainer --version
[2026-03-16 13:54:38] apptainer version 1.4.1-1.el9
[2026-03-16 13:54:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 13:54:39] wns0041.triumf.lcg
[2026-03-16 13:54:39] apptainer works
[2026-03-16 13:54:39] Set ATHENA_PROC_NUMBER=12
[2026-03-16 13:54:39] Set ATHENA_CORE_NUMBER=12
[2026-03-16 13:54:39] Starting ATLAS job with PandaID=7041894514
[2026-03-16 13:54:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 14:00:14]  *** The last 200 lines of the pilot log: ***
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 14:00:14] 2026-03-16 20:59:37,863 | WARNING  | wrong length of table data, x=[1773694609.0], y=[1560.0] (must be same and length>=4)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,863 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | ..............................
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . Timing measurements:
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . get job = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . initial setup = 31 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . payload setup = 25 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . stage-in = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . payload execution = 79 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . stage-out = 1 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . log creation = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | ..............................
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7041894514/pilotlog.txt
[2026-03-16 14:00:14] 2026-03-16 20:59:37,990 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-16 14:00:14] - Log from pilotlog.txt -
[2026-03-16 14:00:14] 2026-03-16 20:59:37,861 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7041894514/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,861 | INFO     | extracted standard info from prmon json
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 14:00:14] 2026-03-16 20:59:37,863 | WARNING  | wrong length of table data, x=[1773694609.0], y=[1560.0] (must be same and length>=4)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,863 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | ..............................
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . Timing measurements:
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . get job = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . initial setup = 31 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . payload setup = 25 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . stage-in = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . payload execution = 79 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . stage-out = 1 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . log creation = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | ..............................
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7041894514/pilotlog.txt
[2026-03-16 14:00:14] 2026-03-16 20:59:37,991 | WARNING  | 
[2026-03-16 14:00:14] [begin log extracts]
[2026-03-16 14:00:14] - Log from pilotlog.txt -
[2026-03-16 14:00:14] 2026-03-16 20:59:37,861 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7041894514/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,861 | INFO     | extracted standard info from prmon json
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 14:00:14] 2026-03-16 20:59:37,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 14:00:14] 2026-03-16 20:59:37,863 | WARNING  | wrong length of table data, x=[1773694609.0], y=[1560.0] (must be same and length>=4)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,863 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | ..............................
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . Timing measurements:
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . get job = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . initial setup = 31 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,877 | INFO     | . payload setup = 25 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . stage-in = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . payload execution = 79 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . stage-out = 1 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | . log creation = 0 s
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | ..............................
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 14:00:14] 2026-03-16 20:59:37,878 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7041894514/pilotlog.txt
[2026-03-16 14:00:14] [end log extracts]
[2026-03-16 14:00:14] 2026-03-16 20:59:37,991 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-16 14:00:14] 2026-03-16 20:59:37,992 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-16 14:00:14] 2026-03-16 20:59:38,062 | INFO     | time since job start (233s) is within the limit (349056.0s)
[2026-03-16 14:00:14] 2026-03-16 20:59:38,591 | INFO     | 
[2026-03-16 14:00:14] 2026-03-16 20:59:38,591 | INFO     | job summary report
[2026-03-16 14:00:14] 2026-03-16 20:59:38,591 | INFO     | --------------------------------------------------
[2026-03-16 14:00:14] 2026-03-16 20:59:38,591 | INFO     | PanDA job id: 7041894514
[2026-03-16 14:00:14] 2026-03-16 20:59:38,591 | INFO     | task id: 48955015
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-16 13:57:26,993 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | pilot state: failed 
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | transexitcode: 65
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | exeerrorcode: 65
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | exitcode: 65
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | cpuconsumptiontime: 21 s
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | nevents: 0
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | neventsw: 0
[2026-03-16 14:00:14] 2026-03-16 20:59:38,592 | INFO     | pid: 3328058
[2026-03-16 14:00:14] 2026-03-16 20:59:38,593 | INFO     | pgrp: 3328058
[2026-03-16 14:00:14] 2026-03-16 20:59:38,593 | INFO     | corecount: 12
[2026-03-16 14:00:14] 2026-03-16 20:59:38,593 | INFO     | event service: False
[2026-03-16 14:00:14] 2026-03-16 20:59:38,593 | INFO     | sizes: {0: 2279690, 1: 2279774, 2: 2280235, 110: 2303475, 111: 2303451, 113: 2307927, 230: 2308065}
[2026-03-16 14:00:14] 2026-03-16 20:59:38,593 | INFO     | --------------------------------------------------
[2026-03-16 14:00:14] 2026-03-16 20:59:38,593 | INFO     | 
[2026-03-16 14:00:14] 2026-03-16 20:59:38,593 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-16 14:00:14] 2026-03-16 20:59:38,646 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,646 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,646 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,646 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,648 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,648 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 14:00:14] 2026-03-16 20:59:38,648 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,648 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 14:00:14] 2026-03-16 20:59:38,648 | INFO     | job 7041894514 has completed (purged errors)
[2026-03-16 14:00:14] 2026-03-16 20:59:38,648 | INFO     | overall cleanup function is called
[2026-03-16 14:00:14] 2026-03-16 20:59:39,655 | INFO     | --- collectZombieJob: --- 10, [3328058]
[2026-03-16 14:00:14] 2026-03-16 20:59:39,655 | INFO     | zombie collector waiting for pid 3328058
[2026-03-16 14:00:14] 2026-03-16 20:59:39,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 14:00:14] 2026-03-16 20:59:39,655 | INFO     | collected zombie processes
[2026-03-16 14:00:14] 2026-03-16 20:59:39,655 | INFO     | will attempt to kill all subprocesses of pid=3328058
[2026-03-16 14:00:14] 2026-03-16 20:59:40,988 | INFO     | process IDs to be killed: [3328058] (in reverse order)
[2026-03-16 14:00:14] 2026-03-16 20:59:41,832 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 14:00:14] 2026-03-16 20:59:41,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 14:00:14] 2026-03-16 20:59:41,865 | INFO     | did not find any defunct processes belonging to 3328058
[2026-03-16 14:00:14] 2026-03-16 20:59:41,898 | INFO     | did not find any defunct processes belonging to 3328058
[2026-03-16 14:00:14] 2026-03-16 20:59:41,899 | INFO     | ready for new job
[2026-03-16 14:00:14] 2026-03-16 20:59:41,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 14:00:14] 2026-03-16 20:59:41,911 | INFO     | **************************************
[2026-03-16 14:00:14] 2026-03-16 20:59:41,912 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-16 14:00:14] 2026-03-16 20:59:41,912 | INFO     | **************************************
[2026-03-16 14:00:14] 2026-03-16 20:59:41,912 | INFO     | 
[2026-03-16 14:00:14] 2026-03-16 20:59:41,915 | INFO     | architecture information:
[2026-03-16 14:00:14] 2026-03-16 20:59:41,916 | INFO     | executing command: cat /etc/os-release
[2026-03-16 14:00:14] 2026-03-16 20:59:41,967 | INFO     | cat /etc/os-release:
[2026-03-16 14:00:14] NAME="CentOS Linux"
[2026-03-16 14:00:14] VERSION="7 (Core)"
[2026-03-16 14:00:14] ID="centos"
[2026-03-16 14:00:14] ID_LIKE="rhel fedora"
[2026-03-16 14:00:14] VERSION_ID="7"
[2026-03-16 14:00:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 14:00:14] ANSI_COLOR="0;31"
[2026-03-16 14:00:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 14:00:14] HOME_URL="https://www.centos.org/"
[2026-03-16 14:00:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 14:00:14] 
[2026-03-16 14:00:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 14:00:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 14:00:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 14:00:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 14:00:14] 
[2026-03-16 14:00:14] 2026-03-16 20:59:41,968 | INFO     | **************************************
[2026-03-16 14:00:14] 2026-03-16 20:59:42,473 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-16 14:00:14] 2026-03-16 20:59:42,569 | INFO     | sufficient remaining disk space (2030223491072 B)
[2026-03-16 14:00:14] 2026-03-16 20:59:42,569 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 14:00:14] 2026-03-16 20:59:42,569 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 14:00:14] 2026-03-16 20:59:42,569 | INFO     | update_server=False
[2026-03-16 14:00:14] 2026-03-16 20:59:42,569 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 14:00:14] 2026-03-16 20:59:42,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 14:00:14] 2026-03-16 20:59:43,087 | INFO     | all payload control threads have been joined
[2026-03-16 14:00:14] 2026-03-16 20:59:43,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:00:14] 2026-03-16 20:59:43,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:00:14] 2026-03-16 20:59:43,228 | INFO     | aborting loop
[2026-03-16 14:00:14] 2026-03-16 20:59:43,289 | INFO     | all job control threads have been joined
[2026-03-16 14:00:14] 2026-03-16 20:59:43,576 | INFO     | [job] retrieve thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:43,577 | INFO     | all data control threads have been joined
[2026-03-16 14:00:14] 2026-03-16 20:59:43,594 | INFO     | [data] copytool_in thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:43,799 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:43,862 | INFO     | [payload] failed_post thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,093 | INFO     | [payload] control thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,104 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,162 | INFO     | [job] queue monitor thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,234 | INFO     | [job] job monitor thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,295 | INFO     | [job] control thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,577 | INFO     | [data] copytool_out thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,583 | INFO     | [data] control thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,595 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 14:00:14] 2026-03-16 20:59:44,669 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:44,864 | INFO     | [job] validate thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:45,025 | INFO     | [monitor] cgroup control has ended
[2026-03-16 14:00:14] 2026-03-16 20:59:45,069 | INFO     | [payload] validate_post thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:48,665 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 14:00:14] 2026-03-16 20:59:50,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259282097984)>', '<ExcThread(monitor, started 140258893080320)>']
[2026-03-16 14:00:14] 2026-03-16 20:59:55,027 | INFO     | all workflow threads have been joined
[2026-03-16 14:00:14] 2026-03-16 20:59:55,027 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 14:00:14] 2026-03-16 20:59:55,028 | INFO     | traces error code: 0
[2026-03-16 14:00:14] 2026-03-16 20:59:55,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 14:00:14] 2026-03-16 21:00:12,792 | INFO     | PID=3323052 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 14:00:14] 2026-03-16 21:00:12,792 | INFO     | .. there are 34 such processes running
[2026-03-16 14:00:14] 2026-03-16 21:00:12,792 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 14:00:14] 2026-03-16 21:00:12,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 14:00:14] 2026-03-16 21:00:12,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 14:00:14] 2026-03-16 21:00:12,792 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 14:00:14] 2026-03-16 21:00:12,792 | INFO     | [monitor] control thread has ended
[2026-03-16 14:00:14] 2026-03-16 21:00:13,395 [wrapper] ==== pilot stdout END ====
[2026-03-16 14:00:14] 2026-03-16 21:00:13,435 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 14:00:14] 2026-03-16 21:00:13,473 [wrapper] pilotpid: 3323052
[2026-03-16 14:00:14] 2026-03-16 21:00:13,491 [wrapper] Pilot exit status: 0
[2026-03-16 14:00:14] 2026-03-16 21:00:13,579 [wrapper] pandaids: 7041894514
[2026-03-16 14:00:14] 2026-03-16 21:00:13,675 [wrapper] cleanup supervisor_pilot 3323058 3323053
[2026-03-16 14:00:14] 2026-03-16 21:00:13,678 [wrapper] Test setup, not cleaning
[2026-03-16 14:00:14] 2026-03-16 21:00:13,682 [wrapper] apfmon messages muted
[2026-03-16 14:00:14] 2026-03-16 21:00:13,685 [wrapper] ==== wrapper stdout END ====
[2026-03-16 14:00:14] 2026-03-16 21:00:13,688 [wrapper] ==== wrapper stderr END ====
[2026-03-16 14:00:14]  *** Error codes and diagnostics ***
[2026-03-16 14:00:14]     "exeErrorCode": 65,
[2026-03-16 14:00:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 14:00:14]     "pilotErrorCode": 1305,
[2026-03-16 14:00:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 14:00:14]  *** Listing of results directory ***
[2026-03-16 14:00:14] total 434640
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc    602657 Feb  3 03:11 pilot3.tar.gz
[2026-03-16 14:00:14] -rwx------. 1 boinc boinc     36322 Mar  9 20:55 runpilot2-wrapper.sh
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc      5111 Mar  9 20:56 queuedata.json
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc       100 Mar 16 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 14:00:14] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 13:54 run_atlas
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc       105 Mar 16 13:54 job.xml
[2026-03-16 14:00:14] -rw-r--r--. 2 boinc boinc 440871167 Mar 16 13:54 EVNT.46701403._002125.pool.root.1
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc      6594 Mar 16 13:54 init_data.xml
[2026-03-16 14:00:14] -rw-r--r--. 2 boinc boinc     15845 Mar 16 13:54 start_atlas.sh
[2026-03-16 14:00:14] drwxrwx--x. 2 boinc boinc      4096 Mar 16 13:54 shared
[2026-03-16 14:00:14] -rw-r--r--. 2 boinc boinc    616316 Mar 16 13:54 input.tar.gz
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc         0 Mar 16 13:54 boinc_lockfile
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc      2569 Mar 16 13:54 pandaJob.out
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc   1006429 Mar 16 13:55 agis_schedconf.cvmfs.json
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc   1511579 Mar 16 13:55 agis_ddmendpoints.agis.ALL.json
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc       445 Mar 16 13:55 workernode_map.json
[2026-03-16 14:00:14] drwx------. 7 boinc boinc      4096 Mar 16 13:55 pilot3
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc       525 Mar 16 13:57 boinc_task_state.xml
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc       944 Mar 16 13:57 memory_monitor_summary.json
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc     21470 Mar 16 13:57 log.48955015._012117.job.log.tgz.1
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc        95 Mar 16 13:59 pilot_heartbeat.json
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc      7017 Mar 16 13:59 heartbeat.json
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc      8192 Mar 16 14:00 boinc_mmap_file
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc        23 Mar 16 14:00 wrapper_checkpoint.txt
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc       823 Mar 16 14:00 pilotlog.txt
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc     91617 Mar 16 14:00 log.48955015._012117.job.log.1
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc       188 Mar 16 14:00 output.list
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc       620 Mar 16 14:00 runtime_log
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc    133120 Mar 16 14:00 result.tar.gz
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc       643 Mar 16 14:00 TZYKDmkM3J9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmfqeLDm8wx35n.diag
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc      8635 Mar 16 14:00 runtime_log.err
[2026-03-16 14:00:14] -rw-r--r--. 1 boinc boinc     21803 Mar 16 14:00 stderr.txt
[2026-03-16 14:00:14] No HITS result produced
[2026-03-16 14:00:14]  *** Contents of shared directory: ***
[2026-03-16 14:00:14] total 431296
[2026-03-16 14:00:14] -rw-r--r--. 2 boinc boinc 440871167 Mar 16 13:54 ATLAS.root_0
[2026-03-16 14:00:14] -rw-r--r--. 2 boinc boinc     15845 Mar 16 13:54 start_atlas.sh
[2026-03-16 14:00:14] -rw-r--r--. 2 boinc boinc    616316 Mar 16 13:54 input.tar.gz
[2026-03-16 14:00:14] -rw-------. 1 boinc boinc    133120 Mar 16 14:00 result.tar.gz
14:00:16 (3319259): run_atlas exited; CPU time 33.003467
14:00:16 (3319259): called boinc_finish(0)

</stderr_txt>
]]>

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