Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-16 21:47:13 (27324): vboxwrapper version 26210
2026-03-16 21:47:13 (27324): BOINC client version: 8.2.4
2026-03-16 21:47:15 (27324): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-03-16 21:47:16 (27324): Successfully copied 'init_data.xml' to the shared directory.
2026-03-16 21:47:16 (27324): Create VM. (boinc_6e0e5c9bbad0bb32, slot#0)
2026-03-16 21:47:18 (27324): Setting Memory Size for VM. (4200MB)
2026-03-16 21:47:19 (27324): Setting CPU Count for VM. (2)
2026-03-16 21:47:19 (27324): Setting Chipset Options for VM.
2026-03-16 21:47:20 (27324): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-16 21:47:20 (27324): Setting Boot Options for VM.
2026-03-16 21:47:21 (27324): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-16 21:47:22 (27324): Enabling VM Network Access.
2026-03-16 21:47:22 (27324): Disabling USB Support for VM.
2026-03-16 21:47:23 (27324): Disabling COM Port Support for VM.
2026-03-16 21:47:24 (27324): Disabling LPT Port Support for VM.
2026-03-16 21:47:24 (27324): Disabling Audio Support for VM.
2026-03-16 21:47:25 (27324): Disabling Clipboard Support for VM.
2026-03-16 21:47:26 (27324): Disabling Drag and Drop Support for VM.
2026-03-16 21:47:26 (27324): Adding storage controller(s) to VM.
2026-03-16 21:47:27 (27324): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-16 21:47:31 (27324): Adding VirtualBox Guest Additions to VM.
2026-03-16 21:47:31 (27324): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-16 21:47:32 (27324): forwarding host port 56051 to guest port 80
2026-03-16 21:47:32 (27324): Enabling remote desktop for VM.
2026-03-16 21:47:32 (27324): Required extension pack not installed, remote desktop not enabled.
2026-03-16 21:47:32 (27324): Enabling shared directory for VM.
2026-03-16 21:47:33 (27324): Starting VM using VBoxManage interface. (boinc_6e0e5c9bbad0bb32, slot#0)
2026-03-16 21:48:08 (27324): Successfully started VM. (PID = '21560')
2026-03-16 21:48:08 (27324): Reporting VM Process ID to BOINC.
2026-03-16 21:48:08 (27324): Guest Log: BIOS: VirtualBox 7.2.2
2026-03-16 21:48:08 (27324): Guest Log: CPUID EDX: 0x178bfbff
2026-03-16 21:48:08 (27324): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-16 21:48:08 (27324): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-16 21:48:08 (27324): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-16 21:48:08 (27324): Detected: Web Application Enabled (http://localhost:56051)
2026-03-16 21:48:08 (27324): Preference change detected
2026-03-16 21:48:08 (27324): Setting CPU throttle for VM. (100%)
2026-03-16 21:48:09 (27324): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-16 21:48:09 (27324): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-16 21:48:09 (27324): Guest Log: BIOS: Booting from Hard Disk...
2026-03-16 21:48:14 (27324): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-16 21:48:14 (27324): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-16 21:48:14 (27324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-16 21:48:51 (27324): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-16 21:48:51 (27324): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-16 21:49:53 (27324): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.000264 main     Log opened 2026-03-16T21:49:51.923688000Z
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.000620 main     OS Product: Linux
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.000747 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.000794 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.000841 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.000842 main     Process ID: 1245
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.000843 main     Package type: LINUX_64BITS_GENERIC
2026-03-16 21:49:53 (27324): Guest Log: 00:00:00.004265 main     5.2.32 r132073 started. Verbose level = 0
2026-03-16 21:49:54 (27324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-16 21:49:54 (27324): Guest Log: [INFO] Mounting shared directory
2026-03-16 21:49:54 (27324): Guest Log: [INFO] Checking for init_data.xml
2026-03-16 21:50:01 (27324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-16 21:50:01 (27324): Guest Log: [INFO] Detected branch: prod
2026-03-16 21:50:01 (27324): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-16 21:50:01 (27324): Guest Log: Copying input files
2026-03-16 21:50:03 (27324): Guest Log: Copied input files into RunAtlas.
2026-03-16 21:50:03 (27324): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-16 21:50:03 (27324): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-16 21:50:03 (27324): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-16 21:50:03 (27324): Guest Log: Further information can be found at the LHC@home message board.
2026-03-16 21:50:04 (27324): Guest Log: 00:00:10.028884 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 524 422 000ns (GuestNow=1 773 694 203 413 365 000 ns GuestLast=1 773 697 791 937 787 000 ns fSetTimeLastLoop=true )
2026-03-16 21:50:12 (27324): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-16 21:50:12 (27324): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-16 21:50:12 (27324): Guest Log: 2.6.3.0 1519 0 32028 157351 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-16 21:50:18 (27324): Guest Log: copied the webapp to /var/www
2026-03-16 21:50:18 (27324): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-16 21:50:18 (27324): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-16 21:50:20 (27324): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-16 21:50:20 (27324): Guest Log:  *** Starting ATLAS job. (PandaID=7056973619 taskID=49181063) ***
2026-03-16 22:07:28 (27324): Guest Log:  *** Job finished ***
2026-03-16 22:07:28 (27324): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-16 22:07:28 (27324): Guest Log: 2026-03-16 21:06:50,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-16 22:07:28 (27324): Guest Log: 2026-03-16 21:06:50,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-16 22:07:28 (27324): Guest Log: 2026-03-16 21:07:03,256 | INFO     | [monitor] cgroup control has ended
2026-03-16 22:07:28 (27324): Guest Log: 2026-03-16 21:07:04,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540132505408)>', '<ExcThread(monitor, started 140539181659904)>']
2026-03-16 22:07:28 (27324): Guest Log: 2026-03-16 21:07:05,045 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:05,047 | INFO     | [monitor] control thread has ended
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,122 | INFO     | all workflow threads have been joined
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,122 | INFO     | end of generic workflow (traces error code: 0)
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,122 | INFO     | traces error code: 0
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,668 [wrapper] ==== pilot stdout END ====
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,693 [wrapper] ==== wrapper stdout RESUME ====
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,719 [wrapper] pilotpid: 5905
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,740 [wrapper] Pilot exit status: 0
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:09,895 [wrapper] pandaids: 7056973619
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:10,105 [wrapper] cleanup supervisor_pilot 25342 5906
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:10,125 [wrapper] Test setup, not cleaning
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:10,152 [wrapper] apfmon messages muted
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:10,195 [wrapper] ==== wrapper stdout END ====
2026-03-16 22:07:29 (27324): Guest Log: 2026-03-16 21:07:10,214 [wrapper] ==== wrapper stderr END ====
2026-03-16 22:07:29 (27324): Guest Log:  *** Error codes and diagnostics ***
2026-03-16 22:07:29 (27324): Guest Log:     "exeErrorCode": 65,
2026-03-16 22:07:29 (27324): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-16 22:07:29 (27324): Guest Log:     "pilotErrorCode": 1305,
2026-03-16 22:07:29 (27324): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2026-03-16 22:07:29 (27324): Guest Log:  *** Listing of results directory ***
2026-03-16 22:07:29 (27324): Guest Log: total 4556
2026-03-16 22:07:29 (27324): Guest Log: -rw-r--r--. 1 atlas atlas  585013 Mar 16 16:03 pilot3.tar.gz
2026-03-16 22:07:29 (27324): Guest Log: -rwx------. 1 atlas atlas   36322 Mar 16 16:41 runpilot2-wrapper.sh
2026-03-16 22:07:29 (27324): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar 16 16:43 queuedata.json
2026-03-16 22:07:29 (27324): Guest Log: -rwxr-xr-x. 1 atlas atlas    5627 Mar 16 20:50 init_data.xml
2026-03-16 22:07:29 (27324): Guest Log: -rwxr-xr-x. 1 atlas atlas  597544 Mar 16 20:50 input.tar.gz
2026-03-16 22:07:29 (27324): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Mar 16 20:50 start_atlas.sh
2026-03-16 22:07:29 (27324): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 16 20:50 EVNT.49134387._000006.pool.root.1 -> /data/./ATLAS.root_0
2026-03-16 22:07:29 (27324): Guest Log: -rw-r--r--. 1 atlas atlas    2614 Mar 16 20:50 pandaJob.out
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas 1006429 Mar 16 20:51 agis_schedconf.cvmfs.json
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas 1511579 Mar 16 20:51 agis_ddmendpoints.agis.ALL.json
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas     429 Mar 16 20:51 workernode_map.json
2026-03-16 22:07:29 (27324): Guest Log: drwx------. 5 atlas atlas    4096 Mar 16 20:52 pilot3
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas   62728 Mar 16 21:04 log.49181063._000133.job.log.tgz.1
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas      95 Mar 16 21:05 pilot_heartbeat.json
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas    6748 Mar 16 21:06 heartbeat.json
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas    4987 Mar 16 21:07 pilotlog.txt
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas  341457 Mar 16 21:07 log.49181063._000133.job.log.1
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas     188 Mar 16 21:07 output.list
2026-03-16 22:07:29 (27324): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 16 21:07 runtime_log
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas  419840 Mar 16 21:07 result.tar.gz
2026-03-16 22:07:29 (27324): Guest Log: -rw-------. 1 atlas atlas     658 Mar 16 21:07 RYvNDmDBQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmyKvLDmVMPRYo.diag
2026-03-16 22:07:29 (27324): Guest Log: -rw-r--r--. 1 atlas atlas    8629 Mar 16 21:07 runtime_log.err
2026-03-16 22:07:29 (27324): Guest Log: Looking for outputfile HITS.49181063._000133.pool.root.1
2026-03-16 22:07:29 (27324): Guest Log: No HITS file was produced
2026-03-16 22:07:29 (27324): Guest Log: Successfully finished the ATLAS job!
2026-03-16 22:07:29 (27324): Guest Log: Copying the results back to the shared directory!
2026-03-16 22:07:29 (27324): Guest Log:  *** Contents of shared directory: ***
2026-03-16 22:07:29 (27324): Guest Log: total 235128
2026-03-16 22:07:29 (27324): Guest Log: -rwxrwxrwx. 1 root root 239724050 Mar 16 20:47 ATLAS.root_0
2026-03-16 22:07:29 (27324): Guest Log: -rwxrwxrwx. 1 root root      5627 Mar 16 20:47 init_data.xml
2026-03-16 22:07:29 (27324): Guest Log: -rwxrwxrwx. 1 root root    597544 Mar 16 20:46 input.tar.gz
2026-03-16 22:07:29 (27324): Guest Log: -rwxrwxrwx. 1 root root    419840 Mar 16 21:07 result.tar.gz
2026-03-16 22:07:29 (27324): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar 16 20:46 start_atlas.sh
2026-03-16 22:07:29 (27324): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-16 22:07:29 (27324): Guest Log: 00:17:27.078632 control  Guest control service stopped
2026-03-16 22:07:29 (27324): Guest Log: 00:17:27.781312 control  Guest control worker returned with rc=VINF_SUCCESS
2026-03-16 22:07:29 (27324): Guest Log: 00:17:27.781471 main     Session 0 is about to close ...
2026-03-16 22:07:29 (27324): Guest Log: 00:17:27.781520 main     Stopping all guest processes ...
2026-03-16 22:07:29 (27324): Guest Log: 00:17:27.781565 main     Closing all guest files ...
2026-03-16 22:07:29 (27324): Guest Log: 00:17:28.007363 main     Ended.
2026-03-16 22:07:29 (27324): VM Completion File Detected.
2026-03-16 22:07:29 (27324): Powering off VM.
2026-03-16 22:07:50 (27324): Successfully stopped VM.
2026-03-16 22:07:50 (27324): Deregistering VM. (boinc_6e0e5c9bbad0bb32, slot#0)
2026-03-16 22:07:52 (27324): Removing network bandwidth throttle group from VM.
2026-03-16 22:07:54 (27324): Removing VM from VirtualBox.
2026-03-16 22:08:03 (27324): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN