Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:38:11 (1266): wrapper (7.7.26015): starting
17:38:11 (1266): wrapper: running run_atlas (--nthreads 8)
[2026-03-16 17:38:11] Arguments: --nthreads 8
[2026-03-16 17:38:11] Threads: 8
[2026-03-16 17:38:11] Checking for CVMFS
[2026-03-16 17:38:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 17:38:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 17:38:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 17:38:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 17:38:12] 2.11.2.0 24877 276633 142348 157351 2 228 13003636 18432001 1861 130560 0 180734727 99.981 10409871 27135 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-16 17:38:12] CVMFS is ok
[2026-03-16 17:38:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 17:38:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 17:38:12] Further information can be found at the LHC@home message board.
[2026-03-16 17:38:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 17:38:12] Checking for apptainer binary...
[2026-03-16 17:38:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 17:38:12] Running /usr/bin/apptainer --version
[2026-03-16 17:38:12] apptainer version 1.3.2-1.el7
[2026-03-16 17:38:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 17:38:12] c-206-3.aglt2.org
[2026-03-16 17:38:12] apptainer works
[2026-03-16 17:38:12] Set ATHENA_PROC_NUMBER=8
[2026-03-16 17:38:12] Set ATHENA_CORE_NUMBER=8
[2026-03-16 17:38:12] Starting ATLAS job with PandaID=7056970551
[2026-03-16 17:38:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-17 02:59:29]  *** The last 200 lines of the pilot log: ***
[2026-03-17 02:59:29] 2026-03-17 06:58:39,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-17 02:59:29] 2026-03-17 06:58:39,390 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-17 02:59:29] 2026-03-17 06:58:39,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-17 02:59:29] 2026-03-17 06:58:39,404 | INFO     | fitting pss+swap vs Time
[2026-03-17 02:59:29] 2026-03-17 06:58:39,405 | INFO     | sum of square deviations: 51871856300.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,415 | INFO     | sum of deviations: -132831871930.99997
[2026-03-17 02:59:29] 2026-03-17 06:58:39,416 | INFO     | mean x: 1773713894.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,416 | INFO     | mean y: 2579700.537205082
[2026-03-17 02:59:29] 2026-03-17 06:58:39,416 | INFO     | intersect: 4544652292.800367
[2026-03-17 02:59:29] 2026-03-17 06:58:39,417 | INFO     | chi2: 1.8082943447354485
[2026-03-17 02:59:29] 2026-03-17 06:58:39,418 | INFO     | sum of square deviations: 50472509132.5
[2026-03-17 02:59:29] 2026-03-17 06:58:39,428 | INFO     | sum of deviations: -128941252829.99998
[2026-03-17 02:59:29] 2026-03-17 06:58:39,428 | INFO     | mean x: 1773713741.5
[2026-03-17 02:59:29] 2026-03-17 06:58:39,428 | INFO     | mean y: 2580124.545787546
[2026-03-17 02:59:29] 2026-03-17 06:58:39,428 | INFO     | intersect: 4533856178.018831
[2026-03-17 02:59:29] 2026-03-17 06:58:39,429 | INFO     | chi2: 1.808370205084794
[2026-03-17 02:59:29] 2026-03-17 06:58:39,430 | INFO     | current chi2=1.808370205084794 (change=-0.004195132809348549 %)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,430 | INFO     | right removable region: 545
[2026-03-17 02:59:29] 2026-03-17 06:58:39,431 | INFO     | sum of square deviations: 50472509132.5
[2026-03-17 02:59:29] 2026-03-17 06:58:39,441 | INFO     | sum of deviations: -227324917969.50003
[2026-03-17 02:59:29] 2026-03-17 06:58:39,441 | INFO     | mean x: 1773714046.5
[2026-03-17 02:59:29] 2026-03-17 06:58:39,441 | INFO     | mean y: 2589962.705128205
[2026-03-17 02:59:29] 2026-03-17 06:58:39,441 | INFO     | intersect: 7991283353.466833
[2026-03-17 02:59:29] 2026-03-17 06:58:39,442 | INFO     | chi2: 0.29503620568243166
[2026-03-17 02:59:29] 2026-03-17 06:58:39,442 | INFO     | current chi2=0.29503620568243166 (change=83.68428201186488 %)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,443 | INFO     | sum of square deviations: 49098557790.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,453 | INFO     | sum of deviations: -254154613818.99985
[2026-03-17 02:59:29] 2026-03-17 06:58:39,453 | INFO     | mean x: 1773714199.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,453 | INFO     | mean y: 2592940.639556377
[2026-03-17 02:59:29] 2026-03-17 06:58:39,454 | INFO     | intersect: 9184077439.63917
[2026-03-17 02:59:29] 2026-03-17 06:58:39,455 | INFO     | chi2: 0.17868326484395008
[2026-03-17 02:59:29] 2026-03-17 06:58:39,462 | INFO     | current chi2=0.17868326484395008 (change=39.43683473333455 %)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,463 | INFO     | sum of square deviations: 47749769710.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,473 | INFO     | sum of deviations: -266183145655.5
[2026-03-17 02:59:29] 2026-03-17 06:58:39,474 | INFO     | mean x: 1773714351.5
[2026-03-17 02:59:29] 2026-03-17 06:58:39,474 | INFO     | mean y: 2594294.5541044776
[2026-03-17 02:59:29] 2026-03-17 06:58:39,474 | INFO     | intersect: 9890241260.057661
[2026-03-17 02:59:29] 2026-03-17 06:58:39,475 | INFO     | chi2: 0.12581608361785085
[2026-03-17 02:59:29] 2026-03-17 06:58:39,475 | INFO     | current chi2=0.12581608361785085 (change=29.58709159040152 %)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,476 | INFO     | sum of square deviations: 46425912330.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,485 | INFO     | sum of deviations: -266743326498.00006
[2026-03-17 02:59:29] 2026-03-17 06:58:39,486 | INFO     | mean x: 1773714504.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,486 | INFO     | mean y: 2594358.79472693
[2026-03-17 02:59:29] 2026-03-17 06:58:39,486 | INFO     | intersect: 10193595101.907324
[2026-03-17 02:59:29] 2026-03-17 06:58:39,487 | INFO     | chi2: 0.11886246748571906
[2026-03-17 02:59:29] 2026-03-17 06:58:39,487 | INFO     | current chi2=0.11886246748571906 (change=5.526810191654388 %)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,487 | INFO     | left removable region: 40
[2026-03-17 02:59:29] 2026-03-17 06:58:39,488 | INFO     | sum of square deviations: 39934739460.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,497 | INFO     | sum of deviations: -254159220722.00003
[2026-03-17 02:59:29] 2026-03-17 06:58:39,497 | INFO     | mean x: 1773714931.0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,498 | INFO     | mean y: 2594226.712871287
[2026-03-17 02:59:29] 2026-03-17 06:58:39,498 | INFO     | intersect: 11291161793.241728
[2026-03-17 02:59:29] 2026-03-17 06:58:39,499 | INFO     | chi2: 0.1022370013581201
[2026-03-17 02:59:29] 2026-03-17 06:58:39,499 | INFO     | current memory leak: -6.36 B/s (using 505 data points, chi2=0.10)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,500 | INFO     | could have reported an average CPU frequency of 2511 MHz (22 samples)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,500 | INFO     | ..............................
[2026-03-17 02:59:29] 2026-03-17 06:58:39,500 | INFO     | . Timing measurements:
[2026-03-17 02:59:29] 2026-03-17 06:58:39,501 | INFO     | . get job = 0 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,501 | INFO     | . initial setup = 6 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,501 | INFO     | . payload setup = 5 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,501 | INFO     | . stage-in = 0 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,501 | INFO     | . payload execution = 33595 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,501 | INFO     | . stage-out = 2 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,502 | INFO     | . log creation = 0 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,502 | INFO     | ..............................
[2026-03-17 02:59:29] 2026-03-17 06:58:39,885 | INFO     | 
[2026-03-17 02:59:29] 2026-03-17 06:58:39,885 | INFO     | job summary report
[2026-03-17 02:59:29] 2026-03-17 06:58:39,885 | INFO     | --------------------------------------------------
[2026-03-17 02:59:29] 2026-03-17 06:58:39,886 | INFO     | PanDA job id: 7056970551
[2026-03-17 02:59:29] 2026-03-17 06:58:39,886 | INFO     | task id: 49180885
[2026-03-17 02:59:29] 2026-03-17 06:58:39,886 | INFO     | errors: (none)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,886 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-17 02:59:29] 2026-03-17 06:58:39,886 | INFO     | pilot state: finished 
[2026-03-17 02:59:29] 2026-03-17 06:58:39,886 | INFO     | transexitcode: 0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,887 | INFO     | exeerrorcode: 0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,887 | INFO     | exeerrordiag: 
[2026-03-17 02:59:29] 2026-03-17 06:58:39,887 | INFO     | exitcode: 0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,887 | INFO     | exitmsg: OK
[2026-03-17 02:59:29] 2026-03-17 06:58:39,887 | INFO     | cpuconsumptiontime: 259542 s
[2026-03-17 02:59:29] 2026-03-17 06:58:39,887 | INFO     | nevents: 400
[2026-03-17 02:59:29] 2026-03-17 06:58:39,888 | INFO     | neventsw: 0
[2026-03-17 02:59:29] 2026-03-17 06:58:39,888 | INFO     | pid: 9891
[2026-03-17 02:59:29] 2026-03-17 06:58:39,888 | INFO     | pgrp: 9891
[2026-03-17 02:59:29] 2026-03-17 06:58:39,888 | INFO     | corecount: 8
[2026-03-17 02:59:29] 2026-03-17 06:58:39,888 | INFO     | event service: False
[2026-03-17 02:59:29] 2026-03-17 06:58:39,888 | INFO     | sizes: {0: 2279203, 1: 2280321, 2: 2280321, 33603: 2320056, 33604: 2320055, 33606: 2329109, 33607: 2329293, 33610: 2329487}
[2026-03-17 02:59:29] 2026-03-17 06:58:39,889 | INFO     | --------------------------------------------------
[2026-03-17 02:59:29] 2026-03-17 06:58:39,889 | INFO     | 
[2026-03-17 02:59:29] 2026-03-17 06:58:39,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-17 02:59:29] 2026-03-17 06:58:39,907 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,908 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,908 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,908 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,911 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,911 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-17 02:59:29] 2026-03-17 06:58:39,911 | INFO     | job 7056970551 has completed (purged errors)
[2026-03-17 02:59:29] 2026-03-17 06:58:39,911 | INFO     | overall cleanup function is called
[2026-03-17 02:59:29] 2026-03-17 06:58:40,919 | INFO     | --- collectZombieJob: --- 10, [9891]
[2026-03-17 02:59:29] 2026-03-17 06:58:40,919 | INFO     | zombie collector waiting for pid 9891
[2026-03-17 02:59:29] 2026-03-17 06:58:40,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-17 02:59:29] 2026-03-17 06:58:40,920 | INFO     | collected zombie processes
[2026-03-17 02:59:29] 2026-03-17 06:58:40,920 | INFO     | will attempt to kill all subprocesses of pid=9891
[2026-03-17 02:59:29] 2026-03-17 06:58:41,080 | INFO     | process IDs to be killed: [9891] (in reverse order)
[2026-03-17 02:59:29] 2026-03-17 06:58:41,134 | WARNING  | found no corresponding commands to process id(s)
[2026-03-17 02:59:29] 2026-03-17 06:58:41,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-17 02:59:29] 2026-03-17 06:58:41,140 | INFO     | did not find any defunct processes belonging to 9891
[2026-03-17 02:59:29] 2026-03-17 06:58:41,145 | INFO     | did not find any defunct processes belonging to 9891
[2026-03-17 02:59:29] 2026-03-17 06:58:41,145 | INFO     | ready for new job
[2026-03-17 02:59:29] 2026-03-17 06:58:41,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-17 02:59:29] 2026-03-17 06:58:41,148 | INFO     | **************************************
[2026-03-17 02:59:29] 2026-03-17 06:58:41,148 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-17 02:59:29] 2026-03-17 06:58:41,149 | INFO     | **************************************
[2026-03-17 02:59:29] 2026-03-17 06:58:41,149 | INFO     | 
[2026-03-17 02:59:29] 2026-03-17 06:58:41,150 | INFO     | architecture information:
[2026-03-17 02:59:29] 2026-03-17 06:58:41,150 | INFO     | executing command: cat /etc/os-release
[2026-03-17 02:59:29] 2026-03-17 06:58:41,167 | INFO     | cat /etc/os-release:
[2026-03-17 02:59:29] NAME="CentOS Linux"
[2026-03-17 02:59:29] VERSION="7 (Core)"
[2026-03-17 02:59:29] ID="centos"
[2026-03-17 02:59:29] ID_LIKE="rhel fedora"
[2026-03-17 02:59:29] VERSION_ID="7"
[2026-03-17 02:59:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-17 02:59:29] ANSI_COLOR="0;31"
[2026-03-17 02:59:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-17 02:59:29] HOME_URL="https://www.centos.org/"
[2026-03-17 02:59:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-17 02:59:29] 
[2026-03-17 02:59:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-17 02:59:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-17 02:59:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-17 02:59:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-17 02:59:29] 
[2026-03-17 02:59:29] 2026-03-17 06:58:41,167 | INFO     | **************************************
[2026-03-17 02:59:29] 2026-03-17 06:58:41,669 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-17 02:59:29] 2026-03-17 06:58:41,684 | INFO     | sufficient remaining disk space (26825719808 B)
[2026-03-17 02:59:29] 2026-03-17 06:58:41,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-17 02:59:29] 2026-03-17 06:58:41,685 | INFO     | current server update state: UPDATING_FINAL
[2026-03-17 02:59:29] 2026-03-17 06:58:41,685 | INFO     | update_server=False
[2026-03-17 02:59:29] 2026-03-17 06:58:41,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-17 02:59:29] 2026-03-17 06:58:41,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-17 02:59:29] 2026-03-17 06:58:41,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-17 02:59:29] 2026-03-17 06:58:41,686 | INFO     | aborting loop
[2026-03-17 02:59:29] 2026-03-17 06:58:41,849 | INFO     | all job control threads have been joined
[2026-03-17 02:59:29] 2026-03-17 06:58:42,343 | INFO     | all payload control threads have been joined
[2026-03-17 02:59:29] 2026-03-17 06:58:42,617 | INFO     | all data control threads have been joined
[2026-03-17 02:59:29] 2026-03-17 06:58:42,690 | INFO     | [job] retrieve thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:42,691 | INFO     | [job] job monitor thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:42,825 | INFO     | [payload] validate_pre thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:42,853 | INFO     | [job] control thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:42,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-17 02:59:29] 2026-03-17 06:58:43,209 | INFO     | [payload] execute_payloads thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,348 | INFO     | [payload] control thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,457 | INFO     | [job] validate thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,496 | INFO     | [job] create_data_payload thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,512 | INFO     | [data] copytool_in thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,514 | INFO     | [payload] failed_post thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,622 | INFO     | [data] control thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,691 | INFO     | [data] copytool_out thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:43,764 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:44,179 | INFO     | [payload] validate_post thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:44,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-17 02:59:29] 2026-03-17 06:58:45,669 | INFO     | [job] queue monitor thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:58:46,953 | INFO     | [data] queue_monitor thread has finished
[2026-03-17 02:59:29] 2026-03-17 06:59:12,238 | INFO     | PID=5495 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-17 02:59:29] 2026-03-17 06:59:12,238 | INFO     | .. there are 3 such processes running
[2026-03-17 02:59:29] 2026-03-17 06:59:12,239 | INFO     | found 0 job(s) in 20 queues
[2026-03-17 02:59:29] 2026-03-17 06:59:12,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-17 02:59:29] 2026-03-17 06:59:12,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-17 02:59:29] 2026-03-17 06:59:23,580 | INFO     | [monitor] cgroup control has ended
[2026-03-17 02:59:29] 2026-03-17 06:59:23,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710915532608)>', '<ExcThread(monitor, started 139710613661440)>']
[2026-03-17 02:59:29] 2026-03-17 06:59:24,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-17 02:59:29] 2026-03-17 06:59:24,299 | INFO     | [monitor] control thread has ended
[2026-03-17 02:59:29] 2026-03-17 06:59:28,904 | INFO     | all workflow threads have been joined
[2026-03-17 02:59:29] 2026-03-17 06:59:28,904 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-17 02:59:29] 2026-03-17 06:59:28,904 | INFO     | traces error code: 0
[2026-03-17 02:59:29] 2026-03-17 06:59:28,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-17 02:59:29] 2026-03-17 06:59:29,027 [wrapper] ==== pilot stdout END ====
[2026-03-17 02:59:29] 2026-03-17 06:59:29,029 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-17 02:59:29] 2026-03-17 06:59:29,031 [wrapper] pilotpid: 5495
[2026-03-17 02:59:29] 2026-03-17 06:59:29,033 [wrapper] Pilot exit status: 0
[2026-03-17 02:59:29] 2026-03-17 06:59:29,043 [wrapper] pandaids: 7056970551
[2026-03-17 02:59:29] 2026-03-17 06:59:29,071 [wrapper] cleanup supervisor_pilot 28822 5496
[2026-03-17 02:59:29] 2026-03-17 06:59:29,073 [wrapper] Test setup, not cleaning
[2026-03-17 02:59:29] 2026-03-17 06:59:29,076 [wrapper] apfmon messages muted
[2026-03-17 02:59:29] 2026-03-17 06:59:29,079 [wrapper] ==== wrapper stdout END ====
[2026-03-17 02:59:29] 2026-03-17 06:59:29,081 [wrapper] ==== wrapper stderr END ====
[2026-03-17 02:59:29]  *** Error codes and diagnostics ***
[2026-03-17 02:59:29]     "exeErrorCode": 0,
[2026-03-17 02:59:29]     "exeErrorDiag": "",
[2026-03-17 02:59:29]     "pilotErrorCode": 0,
[2026-03-17 02:59:29]     "pilotErrorDiag": "",
[2026-03-17 02:59:29]  *** Listing of results directory ***
[2026-03-17 02:59:29] total 501956
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas    585013 Mar 16 12:03 pilot3.tar.gz
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas      5111 Mar 16 12:40 queuedata.json
[2026-03-17 02:59:29] -rwx------ 1 boincer umatlas     36322 Mar 16 12:40 runpilot2-wrapper.sh
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas       100 Mar 16 17:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-17 02:59:29] -rwxr-xr-x 1 boincer umatlas      7986 Mar 16 17:38 run_atlas
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas       105 Mar 16 17:38 job.xml
[2026-03-17 02:59:29] -rw-r--r-- 2 boincer umatlas 241926513 Mar 16 17:38 EVNT.49134059._000002.pool.root.1
[2026-03-17 02:59:29] -rw-r--r-- 2 boincer umatlas     15845 Mar 16 17:38 start_atlas.sh
[2026-03-17 02:59:29] drwxrwx--x 2 boincer umatlas      4096 Mar 16 17:38 shared
[2026-03-17 02:59:29] -rw-r--r-- 2 boincer umatlas    597537 Mar 16 17:38 input.tar.gz
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas         0 Mar 16 17:38 boinc_lockfile
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas      2609 Mar 16 17:38 pandaJob.out
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas        57 Mar 16 17:38 setup.sh.local
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas   1006429 Mar 16 17:38 agis_schedconf.cvmfs.json
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas       444 Mar 16 17:38 workernode_map.json
[2026-03-17 02:59:29] drwx------ 5 boincer umatlas      4096 Mar 16 17:38 pilot3
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas 257374094 Mar 17 02:57 HITS.49180885._000026.pool.root.1
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas       531 Mar 17 02:58 boinc_task_state.xml
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas      1049 Mar 17 02:58 memory_monitor_summary.json
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas   1511579 Mar 17 02:58 agis_ddmendpoints.agis.ALL.json
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas    715193 Mar 17 02:58 log.49180885._000026.job.log.tgz.1
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas      6413 Mar 17 02:58 heartbeat.json
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas      5952 Mar 17 02:58 init_data.xml
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas        95 Mar 17 02:59 pilot_heartbeat.json
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas      8192 Mar 17 02:59 boinc_mmap_file
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas        29 Mar 17 02:59 wrapper_checkpoint.txt
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas      4816 Mar 17 02:59 pilotlog.txt
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas   4661765 Mar 17 02:59 log.49180885._000026.job.log.1
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas       357 Mar 17 02:59 output.list
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas       620 Mar 17 02:59 runtime_log
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas   5396480 Mar 17 02:59 result.tar.gz
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas      9337 Mar 17 02:59 runtime_log.err
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas       662 Mar 17 02:59 Jy5MDmqAQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm7GvLDmaxTa1m.diag
[2026-03-17 02:59:29] -rw-r--r-- 1 boincer umatlas     20897 Mar 17 02:59 stderr.txt
[2026-03-17 02:59:29] HITS file was successfully produced:
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas 257374094 Mar 17 02:57 shared/HITS.pool.root.1
[2026-03-17 02:59:29]  *** Contents of shared directory: ***
[2026-03-17 02:59:29] total 493484
[2026-03-17 02:59:29] -rw-r--r-- 2 boincer umatlas 241926513 Mar 16 17:38 ATLAS.root_0
[2026-03-17 02:59:29] -rw-r--r-- 2 boincer umatlas     15845 Mar 16 17:38 start_atlas.sh
[2026-03-17 02:59:29] -rw-r--r-- 2 boincer umatlas    597537 Mar 16 17:38 input.tar.gz
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas 257374094 Mar 17 02:57 HITS.pool.root.1
[2026-03-17 02:59:29] -rw------- 1 boincer umatlas   5396480 Mar 17 02:59 result.tar.gz
02:59:30 (1266): run_atlas exited; CPU time 260066.903765
02:59:30 (1266): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN