Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:28:40 (3890969): wrapper (7.7.26015): starting
20:28:40 (3890969): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 20:28:40] Arguments: --nthreads 12
[2026-03-16 20:28:40] Threads: 12
[2026-03-16 20:28:40] Checking for CVMFS
[2026-03-16 20:28:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 20:28:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 20:28:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 20:28:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 20:28:43] 2.11.5.0 1139287 152505 220484 157357 2 334 32451273 45568000 29806 130560 0 988008732 99.828 524711082 17928 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-16 20:28:43] CVMFS is ok
[2026-03-16 20:28:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 20:28:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 20:28:43] Further information can be found at the LHC@home message board.
[2026-03-16 20:28:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 20:28:43] Checking for apptainer binary...
[2026-03-16 20:28:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 20:28:43] Running /usr/bin/apptainer --version
[2026-03-16 20:28:43] apptainer version 1.4.1-1.el9
[2026-03-16 20:28:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 20:28:44] wns0042.triumf.lcg
[2026-03-16 20:28:44] apptainer works
[2026-03-16 20:28:44] Set ATHENA_PROC_NUMBER=12
[2026-03-16 20:28:44] Set ATHENA_CORE_NUMBER=12
[2026-03-16 20:28:44] Starting ATLAS job with PandaID=7056981193
[2026-03-16 20:28:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 20:33:53]  *** The last 200 lines of the pilot log: ***
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | wrong length of table data, x=[1773718246.0], y=[1166.0] (must be same and length>=4)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | could have reported an average CPU frequency of 1500 MHz (4 samples)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | ..............................
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . Timing measurements:
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . get job = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . initial setup = 27 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . payload setup = 28 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . stage-in = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . payload execution = 48 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . stage-out = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . log creation = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,505 | INFO     | ..............................
[2026-03-16 20:33:53] 2026-03-17 03:33:11,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 20:33:53] 2026-03-17 03:33:11,511 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056981193/pilotlog.txt
[2026-03-16 20:33:53] 2026-03-17 03:33:11,560 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-16 20:33:53] - Log from pilotlog.txt -
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7056981193/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | INFO     | extracted standard info from prmon json
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | wrong length of table data, x=[1773718246.0], y=[1166.0] (must be same and length>=4)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | could have reported an average CPU frequency of 1500 MHz (4 samples)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | ..............................
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . Timing measurements:
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . get job = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . initial setup = 27 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . payload setup = 28 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . stage-in = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . payload execution = 48 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . stage-out = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . log creation = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,505 | INFO     | ..............................
[2026-03-16 20:33:53] 2026-03-17 03:33:11,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 20:33:53] 2026-03-17 03:33:11,511 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056981193/pilotlog.txt
[2026-03-16 20:33:53] 2026-03-17 03:33:11,561 | WARNING  | 
[2026-03-16 20:33:53] [begin log extracts]
[2026-03-16 20:33:53] - Log from pilotlog.txt -
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7056981193/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | INFO     | extracted standard info from prmon json
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 20:33:53] 2026-03-17 03:33:11,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 20:33:53] 2026-03-17 03:33:11,503 | WARNING  | wrong length of table data, x=[1773718246.0], y=[1166.0] (must be same and length>=4)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | could have reported an average CPU frequency of 1500 MHz (4 samples)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | ..............................
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . Timing measurements:
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . get job = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . initial setup = 27 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . payload setup = 28 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . stage-in = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . payload execution = 48 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . stage-out = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,504 | INFO     | . log creation = 0 s
[2026-03-16 20:33:53] 2026-03-17 03:33:11,505 | INFO     | ..............................
[2026-03-16 20:33:53] 2026-03-17 03:33:11,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 20:33:53] 2026-03-17 03:33:11,511 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056981193/pilotlog.txt
[2026-03-16 20:33:53] [end log extracts]
[2026-03-16 20:33:53] 2026-03-17 03:33:11,561 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-16 20:33:53] 2026-03-17 03:33:11,566 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-16 20:33:53] 2026-03-17 03:33:12,124 | INFO     | 
[2026-03-16 20:33:53] 2026-03-17 03:33:12,124 | INFO     | job summary report
[2026-03-16 20:33:53] 2026-03-17 03:33:12,124 | INFO     | --------------------------------------------------
[2026-03-16 20:33:53] 2026-03-17 03:33:12,124 | INFO     | PanDA job id: 7056981193
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | task id: 49182372
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-16 20:31:03,385 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | pilot state: failed 
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | transexitcode: 65
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | exeerrorcode: 65
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | exitcode: 65
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | cpuconsumptiontime: 21 s
[2026-03-16 20:33:53] 2026-03-17 03:33:12,125 | INFO     | nevents: 0
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | neventsw: 0
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | pid: 3899629
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | pgrp: 3899629
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | corecount: 12
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | event service: False
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | sizes: {0: 2279816, 1: 2279900, 2: 2280361, 82: 2303632, 83: 2307924, 86: 2307980, 202: 2308274}
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | --------------------------------------------------
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | 
[2026-03-16 20:33:53] 2026-03-17 03:33:12,126 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-16 20:33:53] 2026-03-17 03:33:12,410 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,411 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,412 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 20:33:53] 2026-03-17 03:33:12,413 | INFO     | job 7056981193 has completed (purged errors)
[2026-03-16 20:33:53] 2026-03-17 03:33:12,413 | INFO     | overall cleanup function is called
[2026-03-16 20:33:53] 2026-03-17 03:33:13,426 | INFO     | --- collectZombieJob: --- 10, [3899629]
[2026-03-16 20:33:53] 2026-03-17 03:33:13,426 | INFO     | zombie collector waiting for pid 3899629
[2026-03-16 20:33:53] 2026-03-17 03:33:13,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 20:33:53] 2026-03-17 03:33:13,426 | INFO     | collected zombie processes
[2026-03-16 20:33:53] 2026-03-17 03:33:13,427 | INFO     | will attempt to kill all subprocesses of pid=3899629
[2026-03-16 20:33:53] 2026-03-17 03:33:14,522 | INFO     | process IDs to be killed: [3899629] (in reverse order)
[2026-03-16 20:33:53] 2026-03-17 03:33:14,723 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 20:33:53] 2026-03-17 03:33:14,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 20:33:53] 2026-03-17 03:33:14,740 | INFO     | did not find any defunct processes belonging to 3899629
[2026-03-16 20:33:53] 2026-03-17 03:33:14,754 | INFO     | did not find any defunct processes belonging to 3899629
[2026-03-16 20:33:53] 2026-03-17 03:33:14,754 | INFO     | ready for new job
[2026-03-16 20:33:53] 2026-03-17 03:33:14,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 20:33:53] 2026-03-17 03:33:14,756 | INFO     | **************************************
[2026-03-16 20:33:53] 2026-03-17 03:33:14,757 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 20:33:53] 2026-03-17 03:33:14,757 | INFO     | **************************************
[2026-03-16 20:33:53] 2026-03-17 03:33:14,757 | INFO     | 
[2026-03-16 20:33:53] 2026-03-17 03:33:14,760 | INFO     | architecture information:
[2026-03-16 20:33:53] 2026-03-17 03:33:14,761 | INFO     | executing command: cat /etc/os-release
[2026-03-16 20:33:53] 2026-03-17 03:33:14,780 | INFO     | cat /etc/os-release:
[2026-03-16 20:33:53] NAME="CentOS Linux"
[2026-03-16 20:33:53] VERSION="7 (Core)"
[2026-03-16 20:33:53] ID="centos"
[2026-03-16 20:33:53] ID_LIKE="rhel fedora"
[2026-03-16 20:33:53] VERSION_ID="7"
[2026-03-16 20:33:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 20:33:53] ANSI_COLOR="0;31"
[2026-03-16 20:33:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 20:33:53] HOME_URL="https://www.centos.org/"
[2026-03-16 20:33:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 20:33:53] 
[2026-03-16 20:33:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 20:33:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 20:33:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 20:33:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 20:33:53] 
[2026-03-16 20:33:53] 2026-03-17 03:33:14,781 | INFO     | **************************************
[2026-03-16 20:33:53] 2026-03-17 03:33:15,284 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-16 20:33:53] 2026-03-17 03:33:15,316 | INFO     | sufficient remaining disk space (1875151683584 B)
[2026-03-16 20:33:53] 2026-03-17 03:33:15,317 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 20:33:53] 2026-03-17 03:33:15,317 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 20:33:53] 2026-03-17 03:33:15,317 | INFO     | update_server=False
[2026-03-16 20:33:53] 2026-03-17 03:33:15,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 20:33:53] 2026-03-17 03:33:15,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 20:33:53] 2026-03-17 03:33:15,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 20:33:53] 2026-03-17 03:33:15,318 | INFO     | aborting loop
[2026-03-16 20:33:53] 2026-03-17 03:33:15,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 20:33:53] 2026-03-17 03:33:15,677 | INFO     | all job control threads have been joined
[2026-03-16 20:33:53] 2026-03-17 03:33:16,014 | INFO     | all data control threads have been joined
[2026-03-16 20:33:53] 2026-03-17 03:33:16,035 | INFO     | all payload control threads have been joined
[2026-03-16 20:33:53] 2026-03-17 03:33:16,328 | INFO     | [job] retrieve thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:16,329 | INFO     | [job] job monitor thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:16,683 | INFO     | [job] control thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:16,750 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:16,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 20:33:53] 2026-03-17 03:33:16,920 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,022 | INFO     | [data] control thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,041 | INFO     | [payload] control thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,097 | INFO     | [payload] failed_post thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,315 | INFO     | [payload] validate_post thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,345 | INFO     | [data] copytool_out thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,465 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,531 | INFO     | [job] validate thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,699 | INFO     | [data] copytool_in thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,824 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:17,831 | INFO     | [job] queue monitor thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:19,336 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 20:33:53] 2026-03-17 03:33:45,198 | INFO     | PID=3894735 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 20:33:53] 2026-03-17 03:33:45,199 | INFO     | .. there are 42 such processes running
[2026-03-16 20:33:53] 2026-03-17 03:33:45,199 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 20:33:53] 2026-03-17 03:33:45,200 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 20:33:53] 2026-03-17 03:33:45,200 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 20:33:53] 2026-03-17 03:33:47,023 | INFO     | [monitor] cgroup control has ended
[2026-03-16 20:33:53] 2026-03-17 03:33:47,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140376527923008)>', '<ExcThread(monitor, started 140376123873024)>']
[2026-03-16 20:33:53] 2026-03-17 03:33:48,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 20:33:53] 2026-03-17 03:33:48,217 | INFO     | [monitor] control thread has ended
[2026-03-16 20:33:53] 2026-03-17 03:33:52,378 | INFO     | all workflow threads have been joined
[2026-03-16 20:33:53] 2026-03-17 03:33:52,378 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 20:33:53] 2026-03-17 03:33:52,379 | INFO     | traces error code: 0
[2026-03-16 20:33:53] 2026-03-17 03:33:52,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 20:33:53] 2026-03-17 03:33:52,734 [wrapper] ==== pilot stdout END ====
[2026-03-16 20:33:53] 2026-03-17 03:33:52,754 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 20:33:53] 2026-03-17 03:33:52,765 [wrapper] pilotpid: 3894735
[2026-03-16 20:33:53] 2026-03-17 03:33:52,786 [wrapper] Pilot exit status: 0
[2026-03-16 20:33:53] 2026-03-17 03:33:52,929 [wrapper] pandaids: 7056981193
[2026-03-16 20:33:53] 2026-03-17 03:33:53,279 [wrapper] cleanup supervisor_pilot 3894741 3894736
[2026-03-16 20:33:53] 2026-03-17 03:33:53,289 [wrapper] Test setup, not cleaning
[2026-03-16 20:33:53] 2026-03-17 03:33:53,293 [wrapper] apfmon messages muted
[2026-03-16 20:33:53] 2026-03-17 03:33:53,301 [wrapper] ==== wrapper stdout END ====
[2026-03-16 20:33:53] 2026-03-17 03:33:53,307 [wrapper] ==== wrapper stderr END ====
[2026-03-16 20:33:53]  *** Error codes and diagnostics ***
[2026-03-16 20:33:53]     "exeErrorCode": 65,
[2026-03-16 20:33:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 20:33:53]     "pilotErrorCode": 1305,
[2026-03-16 20:33:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 20:33:53]  *** Listing of results directory ***
[2026-03-16 20:33:53] total 231048
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc    585013 Mar 16 12:43 pilot3.tar.gz
[2026-03-16 20:33:53] -rwx------. 1 boinc boinc     36322 Mar 16 12:44 runpilot2-wrapper.sh
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc      5111 Mar 16 12:47 queuedata.json
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc       100 Mar 16 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 20:33:53] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 20:28 run_atlas
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc       105 Mar 16 20:28 job.xml
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc      6594 Mar 16 20:28 init_data.xml
[2026-03-16 20:33:53] -rw-r--r--. 2 boinc boinc 232447454 Mar 16 20:28 EVNT.49136845._000012.pool.root.1
[2026-03-16 20:33:53] -rw-r--r--. 2 boinc boinc     15845 Mar 16 20:28 start_atlas.sh
[2026-03-16 20:33:53] drwxrwx--x. 2 boinc boinc      4096 Mar 16 20:28 shared
[2026-03-16 20:33:53] -rw-r--r--. 2 boinc boinc    597540 Mar 16 20:28 input.tar.gz
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc         0 Mar 16 20:28 boinc_lockfile
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc      2616 Mar 16 20:28 pandaJob.out
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc   1006418 Mar 16 20:29 agis_schedconf.cvmfs.json
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc   1511579 Mar 16 20:29 agis_ddmendpoints.agis.ALL.json
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc       444 Mar 16 20:29 workernode_map.json
[2026-03-16 20:33:53] drwx------. 5 boinc boinc      4096 Mar 16 20:29 pilot3
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc       955 Mar 16 20:31 memory_monitor_summary.json
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc     21931 Mar 16 20:31 log.49182372._000297.job.log.tgz.1
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc      7026 Mar 16 20:33 heartbeat.json
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc        95 Mar 16 20:33 pilot_heartbeat.json
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc       524 Mar 16 20:33 boinc_task_state.xml
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc      8192 Mar 16 20:33 boinc_mmap_file
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc        23 Mar 16 20:33 wrapper_checkpoint.txt
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc      4819 Mar 16 20:33 pilotlog.txt
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc     86575 Mar 16 20:33 log.49182372._000297.job.log.1
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc       188 Mar 16 20:33 output.list
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc       620 Mar 16 20:33 runtime_log
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc    122880 Mar 16 20:33 result.tar.gz
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc      8635 Mar 16 20:33 runtime_log.err
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc       643 Mar 16 20:33 fFzLDm02SM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmUwvLDmnjTsrn.diag
[2026-03-16 20:33:53] -rw-r--r--. 1 boinc boinc     21779 Mar 16 20:33 stderr.txt
[2026-03-16 20:33:53] No HITS result produced
[2026-03-16 20:33:53]  *** Contents of shared directory: ***
[2026-03-16 20:33:53] total 227724
[2026-03-16 20:33:53] -rw-r--r--. 2 boinc boinc 232447454 Mar 16 20:28 ATLAS.root_0
[2026-03-16 20:33:53] -rw-r--r--. 2 boinc boinc     15845 Mar 16 20:28 start_atlas.sh
[2026-03-16 20:33:53] -rw-r--r--. 2 boinc boinc    597540 Mar 16 20:28 input.tar.gz
[2026-03-16 20:33:53] -rw-------. 1 boinc boinc    122880 Mar 16 20:33 result.tar.gz
20:33:55 (3890969): run_atlas exited; CPU time 32.209198
20:33:55 (3890969): called boinc_finish(0)

</stderr_txt>
]]>

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