Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:55:57 (2752431): wrapper (7.7.26015): starting
11:55:57 (2752431): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 11:55:57] Arguments: --nthreads 12
[2026-03-16 11:55:57] Threads: 12
[2026-03-16 11:55:57] Checking for CVMFS
[2026-03-16 11:55:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 11:55:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 11:55:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 11:55:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 11:55:58] 2.11.5.0 1774115 152004 257712 157351 1 1349 28165370 45568000 23388 130560 0 1358909052 99.821 737480801 17511 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-16 11:55:58] CVMFS is ok
[2026-03-16 11:55:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 11:55:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 11:55:58] Further information can be found at the LHC@home message board.
[2026-03-16 11:55:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 11:55:58] Checking for apptainer binary...
[2026-03-16 11:55:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 11:55:58] Running /usr/bin/apptainer --version
[2026-03-16 11:55:58] apptainer version 1.4.1-1.el9
[2026-03-16 11:55:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 11:55:58] wns0089.triumf.lcg
[2026-03-16 11:55:58] apptainer works
[2026-03-16 11:55:58] Set ATHENA_PROC_NUMBER=12
[2026-03-16 11:55:58] Set ATHENA_CORE_NUMBER=12
[2026-03-16 11:55:58] Starting ATLAS job with PandaID=7056907447
[2026-03-16 11:55:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 11:59:19]  *** The last 200 lines of the pilot log: ***
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | WARNING  | wrong length of table data, x=[1773687391.0], y=[751.0] (must be same and length>=4)
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | could have reported an average CPU frequency of 2702 MHz (4 samples)
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | ..............................
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . Timing measurements:
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . get job = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . initial setup = 6 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . payload setup = 4 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . stage-in = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . payload execution = 16 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . stage-out = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . log creation = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | ..............................
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056907447/pilotlog.txt
[2026-03-16 11:59:19] 2026-03-16 18:58:44,991 | INFO     | time since job start (154s) is within the limit (345600.0s)
[2026-03-16 11:59:19] 2026-03-16 18:58:45,000 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-16 11:59:19] - Log from pilotlog.txt -
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | found no stored workdir sizes
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | INFO     | will not add max space = 0 B to job metrics
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | WARNING  | wrong length of table data, x=[1773687391.0], y=[751.0] (must be same and length>=4)
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | could have reported an average CPU frequency of 2702 MHz (4 samples)
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | ..............................
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . Timing measurements:
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . get job = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . initial setup = 6 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . payload setup = 4 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . stage-in = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . payload execution = 16 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . stage-out = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . log creation = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | ..............................
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056907447/pilotlog.txt
[2026-03-16 11:59:19] 2026-03-16 18:58:44,991 | INFO     | time since job start (154s) is within the limit (345600.0s)
[2026-03-16 11:59:19] 2026-03-16 18:58:45,000 | WARNING  | 
[2026-03-16 11:59:19] [begin log extracts]
[2026-03-16 11:59:19] - Log from pilotlog.txt -
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | WARNING  | found no stored workdir sizes
[2026-03-16 11:59:19] 2026-03-16 18:58:44,983 | INFO     | will not add max space = 0 B to job metrics
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | WARNING  | wrong length of table data, x=[1773687391.0], y=[751.0] (must be same and length>=4)
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | could have reported an average CPU frequency of 2702 MHz (4 samples)
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | ..............................
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . Timing measurements:
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . get job = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . initial setup = 6 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . payload setup = 4 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . stage-in = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . payload execution = 16 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . stage-out = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | . log creation = 0 s
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | ..............................
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 11:59:19] 2026-03-16 18:58:44,984 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056907447/pilotlog.txt
[2026-03-16 11:59:19] 2026-03-16 18:58:44,991 | INFO     | time since job start (154s) is within the limit (345600.0s)
[2026-03-16 11:59:19] [end log extracts]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,000 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-16 11:59:19] 2026-03-16 18:58:45,001 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-16 11:59:19] 2026-03-16 18:58:45,463 | INFO     | 
[2026-03-16 11:59:19] 2026-03-16 18:58:45,463 | INFO     | job summary report
[2026-03-16 11:59:19] 2026-03-16 18:58:45,463 | INFO     | --------------------------------------------------
[2026-03-16 11:59:19] 2026-03-16 18:58:45,463 | INFO     | PanDA job id: 7056907447
[2026-03-16 11:59:19] 2026-03-16 18:58:45,463 | INFO     | task id: 49176860
[2026-03-16 11:59:19] 2026-03-16 18:58:45,463 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-16 11:56:38,942 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | pilot state: failed 
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | transexitcode: 65
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | exeerrorcode: 65
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | exitcode: 65
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | cpuconsumptiontime: 14 s
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | nevents: 0
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | neventsw: 0
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | pid: 2763788
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | pgrp: 2763788
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | corecount: 12
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | event service: False
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | sizes: {0: 2280312, 11: 2280312, 24: 2303722, 25: 2308014, 27: 2308042, 143: 2308208}
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | --------------------------------------------------
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | 
[2026-03-16 11:59:19] 2026-03-16 18:58:45,464 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-16 11:59:19] 2026-03-16 18:58:45,479 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,479 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,479 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,479 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | job 7056907447 has completed (purged errors)
[2026-03-16 11:59:19] 2026-03-16 18:58:45,480 | INFO     | overall cleanup function is called
[2026-03-16 11:59:19] 2026-03-16 18:58:46,245 | INFO     | PID=2756093 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 11:59:19] 2026-03-16 18:58:46,245 | INFO     | .. there are 35 such processes running
[2026-03-16 11:59:19] 2026-03-16 18:58:46,486 | INFO     | --- collectZombieJob: --- 10, [2763788]
[2026-03-16 11:59:19] 2026-03-16 18:58:46,486 | INFO     | zombie collector waiting for pid 2763788
[2026-03-16 11:59:19] 2026-03-16 18:58:46,486 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 11:59:19] 2026-03-16 18:58:46,486 | INFO     | collected zombie processes
[2026-03-16 11:59:19] 2026-03-16 18:58:46,487 | INFO     | will attempt to kill all subprocesses of pid=2763788
[2026-03-16 11:59:19] 2026-03-16 18:58:46,709 | INFO     | process IDs to be killed: [2763788] (in reverse order)
[2026-03-16 11:59:19] 2026-03-16 18:58:46,783 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 11:59:19] 2026-03-16 18:58:46,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 11:59:19] 2026-03-16 18:58:46,791 | INFO     | did not find any defunct processes belonging to 2763788
[2026-03-16 11:59:19] 2026-03-16 18:58:46,799 | INFO     | did not find any defunct processes belonging to 2763788
[2026-03-16 11:59:19] 2026-03-16 18:58:46,799 | INFO     | ready for new job
[2026-03-16 11:59:19] 2026-03-16 18:58:46,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 11:59:19] 2026-03-16 18:58:46,800 | INFO     | **************************************
[2026-03-16 11:59:19] 2026-03-16 18:58:46,801 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 11:59:19] 2026-03-16 18:58:46,801 | INFO     | **************************************
[2026-03-16 11:59:19] 2026-03-16 18:58:46,801 | INFO     | 
[2026-03-16 11:59:19] 2026-03-16 18:58:46,802 | INFO     | architecture information:
[2026-03-16 11:59:19] 2026-03-16 18:58:46,803 | INFO     | executing command: cat /etc/os-release
[2026-03-16 11:59:19] 2026-03-16 18:58:46,817 | INFO     | cat /etc/os-release:
[2026-03-16 11:59:19] NAME="CentOS Linux"
[2026-03-16 11:59:19] VERSION="7 (Core)"
[2026-03-16 11:59:19] ID="centos"
[2026-03-16 11:59:19] ID_LIKE="rhel fedora"
[2026-03-16 11:59:19] VERSION_ID="7"
[2026-03-16 11:59:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 11:59:19] ANSI_COLOR="0;31"
[2026-03-16 11:59:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 11:59:19] HOME_URL="https://www.centos.org/"
[2026-03-16 11:59:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 11:59:19] 
[2026-03-16 11:59:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 11:59:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 11:59:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 11:59:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 11:59:19] 
[2026-03-16 11:59:19] 2026-03-16 18:58:46,818 | INFO     | **************************************
[2026-03-16 11:59:19] 2026-03-16 18:58:47,320 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-16 11:59:19] 2026-03-16 18:58:47,331 | INFO     | sufficient remaining disk space (1982101192704 B)
[2026-03-16 11:59:19] 2026-03-16 18:58:47,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 11:59:19] 2026-03-16 18:58:47,331 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 11:59:19] 2026-03-16 18:58:47,331 | INFO     | update_server=False
[2026-03-16 11:59:19] 2026-03-16 18:58:47,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 11:59:19] 2026-03-16 18:58:47,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 11:59:19] 2026-03-16 18:58:47,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 11:59:19] 2026-03-16 18:58:47,332 | INFO     | aborting loop
[2026-03-16 11:59:19] 2026-03-16 18:58:47,334 | INFO     | all job control threads have been joined
[2026-03-16 11:59:19] 2026-03-16 18:58:47,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 11:59:19] 2026-03-16 18:58:48,176 | INFO     | all data control threads have been joined
[2026-03-16 11:59:19] 2026-03-16 18:58:48,336 | INFO     | [job] retrieve thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:48,338 | INFO     | [job] job monitor thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:48,339 | INFO     | [job] control thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:48,386 | INFO     | [data] copytool_in thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:48,447 | INFO     | all payload control threads have been joined
[2026-03-16 11:59:19] 2026-03-16 18:58:48,652 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:48,871 | INFO     | [payload] failed_post thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,181 | INFO     | [data] control thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,452 | INFO     | [payload] control thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,500 | INFO     | [data] copytool_out thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,507 | INFO     | [job] validate thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,636 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,727 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,813 | INFO     | [payload] validate_post thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:49,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:50,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 11:59:19] 2026-03-16 18:58:51,071 | INFO     | [job] queue monitor thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:58:51,339 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 11:59:19] 2026-03-16 18:59:10,312 | INFO     | [monitor] cgroup control has ended
[2026-03-16 11:59:19] 2026-03-16 18:59:11,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635166140224)>', '<ExcThread(monitor, started 139634837260032)>']
[2026-03-16 11:59:19] 2026-03-16 18:59:16,786 | INFO     | all workflow threads have been joined
[2026-03-16 11:59:19] 2026-03-16 18:59:16,787 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 11:59:19] 2026-03-16 18:59:16,787 | INFO     | traces error code: 0
[2026-03-16 11:59:19] 2026-03-16 18:59:16,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 11:59:19] 2026-03-16 18:59:18,573 | INFO     | PID=2756093 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-16 11:59:19] 2026-03-16 18:59:18,573 | INFO     | .. there are 35 such processes running
[2026-03-16 11:59:19] 2026-03-16 18:59:18,575 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 11:59:19] 2026-03-16 18:59:18,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 11:59:19] 2026-03-16 18:59:18,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 11:59:19] 2026-03-16 18:59:18,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 11:59:19] 2026-03-16 18:59:18,575 | INFO     | [monitor] control thread has ended
[2026-03-16 11:59:19] 2026-03-16 18:59:18,744 [wrapper] ==== pilot stdout END ====
[2026-03-16 11:59:19] 2026-03-16 18:59:18,769 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 11:59:19] 2026-03-16 18:59:18,787 [wrapper] pilotpid: 2756093
[2026-03-16 11:59:19] 2026-03-16 18:59:18,799 [wrapper] Pilot exit status: 0
[2026-03-16 11:59:19] 2026-03-16 18:59:18,883 [wrapper] pandaids: 7056907447
[2026-03-16 11:59:19] 2026-03-16 18:59:18,961 [wrapper] cleanup supervisor_pilot 2756099 2756094
[2026-03-16 11:59:19] 2026-03-16 18:59:18,964 [wrapper] Test setup, not cleaning
[2026-03-16 11:59:19] 2026-03-16 18:59:18,965 [wrapper] apfmon messages muted
[2026-03-16 11:59:19] 2026-03-16 18:59:18,968 [wrapper] ==== wrapper stdout END ====
[2026-03-16 11:59:19] 2026-03-16 18:59:18,970 [wrapper] ==== wrapper stderr END ====
[2026-03-16 11:59:19]  *** Error codes and diagnostics ***
[2026-03-16 11:59:19]     "exeErrorCode": 65,
[2026-03-16 11:59:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 11:59:19]     "pilotErrorCode": 1305,
[2026-03-16 11:59:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 11:59:19]  *** Listing of results directory ***
[2026-03-16 11:59:19] total 231228
[2026-03-16 11:59:19] -rwx------. 1 boinc boinc     36322 Mar 16 06:14 runpilot2-wrapper.sh
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc    585013 Mar 16 06:19 pilot3.tar.gz
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc      5111 Mar 16 06:25 queuedata.json
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc       100 Mar 16 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 11:59:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 11:55 run_atlas
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc       105 Mar 16 11:55 job.xml
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc      6594 Mar 16 11:55 init_data.xml
[2026-03-16 11:59:19] -rw-r--r--. 2 boinc boinc 232640858 Mar 16 11:55 EVNT.49135504._000002.pool.root.1
[2026-03-16 11:59:19] -rw-r--r--. 2 boinc boinc     15845 Mar 16 11:55 start_atlas.sh
[2026-03-16 11:59:19] drwxrwx--x. 2 boinc boinc      4096 Mar 16 11:55 shared
[2026-03-16 11:59:19] -rw-r--r--. 2 boinc boinc    597539 Mar 16 11:55 input.tar.gz
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc         0 Mar 16 11:55 boinc_lockfile
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc      2622 Mar 16 11:55 pandaJob.out
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc   1006429 Mar 16 11:56 agis_schedconf.cvmfs.json
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc   1511579 Mar 16 11:56 agis_ddmendpoints.agis.ALL.json
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc       444 Mar 16 11:56 workernode_map.json
[2026-03-16 11:59:19] drwx------. 5 boinc boinc      4096 Mar 16 11:56 pilot3
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc       522 Mar 16 11:56 boinc_task_state.xml
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc       988 Mar 16 11:56 memory_monitor_summary.json
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc     21047 Mar 16 11:56 log.49176860._000046.job.log.tgz.1
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc      7047 Mar 16 11:58 heartbeat.json
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc        22 Mar 16 11:59 wrapper_checkpoint.txt
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc        95 Mar 16 11:59 pilot_heartbeat.json
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc       823 Mar 16 11:59 pilotlog.txt
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc      8192 Mar 16 11:59 boinc_mmap_file
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc     80962 Mar 16 11:59 log.49176860._000046.job.log.1
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc       188 Mar 16 11:59 output.list
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc       620 Mar 16 11:59 runtime_log
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc    122880 Mar 16 11:59 result.tar.gz
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc      8635 Mar 16 11:59 runtime_log.err
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc       645 Mar 16 11:59 RLsMDmhxMM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMmwLDmhhc1Uo.diag
[2026-03-16 11:59:19] -rw-r--r--. 1 boinc boinc     21790 Mar 16 11:59 stderr.txt
[2026-03-16 11:59:19] No HITS result produced
[2026-03-16 11:59:19]  *** Contents of shared directory: ***
[2026-03-16 11:59:19] total 227916
[2026-03-16 11:59:19] -rw-r--r--. 2 boinc boinc 232640858 Mar 16 11:55 ATLAS.root_0
[2026-03-16 11:59:19] -rw-r--r--. 2 boinc boinc     15845 Mar 16 11:55 start_atlas.sh
[2026-03-16 11:59:19] -rw-r--r--. 2 boinc boinc    597539 Mar 16 11:55 input.tar.gz
[2026-03-16 11:59:19] -rw-------. 1 boinc boinc    122880 Mar 16 11:59 result.tar.gz
11:59:20 (2752431): run_atlas exited; CPU time 17.728135
11:59:20 (2752431): called boinc_finish(0)

</stderr_txt>
]]>

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