Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:17 (2244955): wrapper (7.7.26015): starting
00:03:17 (2244955): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 00:03:17] Arguments: --nthreads 8
[2026-03-17 00:03:17] Threads: 8
[2026-03-17 00:03:17] Checking for CVMFS
[2026-03-17 00:03:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 00:03:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 00:03:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 00:03:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 00:03:18] 2.13.3.0 6005 117476 164768 157357 3 61 26940901 39288832 9204 16776704 0 68946586 99.597 79214503 36499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-17 00:03:18] CVMFS is ok
[2026-03-17 00:03:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 00:03:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 00:03:18] Further information can be found at the LHC@home message board.
[2026-03-17 00:03:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 00:03:18] Checking for apptainer binary...
[2026-03-17 00:03:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 00:03:18] Running /usr/bin/apptainer --version
[2026-03-17 00:03:18] apptainer version 1.4.5-2.el9
[2026-03-17 00:03:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 00:03:19] c-210-18.aglt2.org
[2026-03-17 00:03:19] apptainer works
[2026-03-17 00:03:19] Set ATHENA_PROC_NUMBER=8
[2026-03-17 00:03:19] Set ATHENA_CORE_NUMBER=8
[2026-03-17 00:03:19] Starting ATLAS job with PandaID=7056968865
[2026-03-17 00:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 04:39:45]  *** The last 200 lines of the pilot log: ***
[2026-03-18 04:39:45] 2026-03-18 08:38:48,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 04:39:45] 2026-03-18 08:38:48,533 | INFO     | time since job start (102883s) is within the limit (345600.0s)
[2026-03-18 04:39:45] 2026-03-18 08:38:48,960 | INFO     | fitting pss+swap vs Time
[2026-03-18 04:39:45] 2026-03-18 08:38:48,962 | INFO     | sum of square deviations: 1486058641603.0469
[2026-03-18 04:39:45] 2026-03-18 08:38:49,557 | INFO     | monitor loop #5606: job 0:7056968865 is in state 'finished'
[2026-03-18 04:39:45] 2026-03-18 08:38:49,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 04:39:45] 2026-03-18 08:38:50,382 | INFO     | sum of deviations: 2645560572656.2134
[2026-03-18 04:39:45] 2026-03-18 08:38:50,383 | INFO     | mean x: 1773771684.3202846
[2026-03-18 04:39:45] 2026-03-18 08:38:50,383 | INFO     | mean y: 2485890.5551601425
[2026-03-18 04:39:45] 2026-03-18 08:38:50,383 | INFO     | intersect: -3155276731.698903
[2026-03-18 04:39:45] 2026-03-18 08:38:50,557 | INFO     | chi2: 12.885819468255768
[2026-03-18 04:39:45] 2026-03-18 08:38:50,560 | INFO     | sum of square deviations: 1472877125813.9312
[2026-03-18 04:39:45] 2026-03-18 08:38:50,713 | INFO     | time since job start (102885s) is within the limit (345600.0s)
[2026-03-18 04:39:45] 2026-03-18 08:38:51,721 | INFO     | sum of deviations: 3174906366661.9717
[2026-03-18 04:39:45] 2026-03-18 08:38:51,722 | INFO     | mean x: 1773771531.825699
[2026-03-18 04:39:45] 2026-03-18 08:38:51,819 | INFO     | mean y: 2492014.491374182
[2026-03-18 04:39:45] 2026-03-18 08:38:51,820 | INFO     | intersect: -3821016702.3576965
[2026-03-18 04:39:45] 2026-03-18 08:38:51,822 | INFO     | chi2: 9.395526624614039
[2026-03-18 04:39:45] 2026-03-18 08:38:51,822 | INFO     | current chi2=9.395526624614039 (change=27.08630873061717 %)
[2026-03-18 04:39:45] 2026-03-18 08:38:51,883 | INFO     | sum of square deviations: 1459772772605.7754
[2026-03-18 04:39:45] 2026-03-18 08:38:52,365 | INFO     | monitor loop #5607: job 0:7056968865 is in state 'finished'
[2026-03-18 04:39:45] 2026-03-18 08:38:52,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 04:39:45] 2026-03-18 08:38:52,868 | INFO     | sum of deviations: 3377323978856.45
[2026-03-18 04:39:45] 2026-03-18 08:38:52,869 | INFO     | mean x: 1773771379.325179
[2026-03-18 04:39:45] 2026-03-18 08:38:52,869 | INFO     | mean y: 2494365.667064439
[2026-03-18 04:39:45] 2026-03-18 08:38:52,869 | INFO     | intersect: -4101295432.871685
[2026-03-18 04:39:45] 2026-03-18 08:38:52,871 | INFO     | chi2: 7.999057919790544
[2026-03-18 04:39:45] 2026-03-18 08:38:52,871 | INFO     | current chi2=7.999057919790544 (change=14.863123277891418 %)
[2026-03-18 04:39:45] 2026-03-18 08:38:52,871 | INFO     | right removable region: 1675
[2026-03-18 04:39:45] 2026-03-18 08:38:52,881 | INFO     | sum of square deviations: 1472875561897.8794
[2026-03-18 04:39:45] 2026-03-18 08:38:53,063 | INFO     | time since job start (102888s) is within the limit (345600.0s)
[2026-03-18 04:39:45] 2026-03-18 08:38:53,263 | INFO     | sum of deviations: 2131923751843.3003
[2026-03-18 04:39:45] 2026-03-18 08:38:53,264 | INFO     | mean x: 1773771836.8239143
[2026-03-18 04:39:45] 2026-03-18 08:38:53,264 | INFO     | mean y: 2491831.440214158
[2026-03-18 04:39:45] 2026-03-18 08:38:53,264 | INFO     | intersect: -2564966280.5016365
[2026-03-18 04:39:45] 2026-03-18 08:38:53,266 | INFO     | chi2: 9.59871521466074
[2026-03-18 04:39:45] 2026-03-18 08:38:53,266 | INFO     | current chi2=9.59871521466074 (change=25.50947001618961 %)
[2026-03-18 04:39:45] 2026-03-18 08:38:53,268 | INFO     | sum of square deviations: 1459770567899.5107
[2026-03-18 04:39:45] 2026-03-18 08:38:53,337 | INFO     | sum of deviations: 1692719668390.9192
[2026-03-18 04:39:45] 2026-03-18 08:38:53,337 | INFO     | mean x: 1773771989.3281622
[2026-03-18 04:39:45] 2026-03-18 08:38:53,338 | INFO     | mean y: 2496942.2983293557
[2026-03-18 04:39:45] 2026-03-18 08:38:53,338 | INFO     | intersect: -2054332260.5927904
[2026-03-18 04:39:45] 2026-03-18 08:38:53,340 | INFO     | chi2: 7.28121313688955
[2026-03-18 04:39:45] 2026-03-18 08:38:53,340 | INFO     | current chi2=7.28121313688955 (change=24.143877862232216 %)
[2026-03-18 04:39:45] 2026-03-18 08:38:53,340 | INFO     | left removable region: 20
[2026-03-18 04:39:45] 2026-03-18 08:38:53,342 | INFO     | sum of square deviations: 1405580999395.89
[2026-03-18 04:39:45] 2026-03-18 08:38:53,793 | INFO     | sum of deviations: 1925318789256.0964
[2026-03-18 04:39:45] 2026-03-18 08:38:53,793 | INFO     | mean x: 1773771958.8404834
[2026-03-18 04:39:45] 2026-03-18 08:38:53,793 | INFO     | mean y: 2511440.1329305135
[2026-03-18 04:39:45] 2026-03-18 08:38:53,794 | INFO     | intersect: -2427143259.0120873
[2026-03-18 04:39:45] 2026-03-18 08:38:53,796 | INFO     | chi2: 0.7316682964139049
[2026-03-18 04:39:45] 2026-03-18 08:38:53,823 | INFO     | current memory leak: 1.37 B/s (using 1655 data points, chi2=0.73)
[2026-03-18 04:39:45] 2026-03-18 08:38:53,825 | INFO     | could have reported an average CPU frequency of 2599 MHz (60 samples)
[2026-03-18 04:39:45] 2026-03-18 08:38:53,825 | INFO     | ..............................
[2026-03-18 04:39:45] 2026-03-18 08:38:53,825 | INFO     | . Timing measurements:
[2026-03-18 04:39:45] 2026-03-18 08:38:53,825 | INFO     | . get job = 0 s
[2026-03-18 04:39:45] 2026-03-18 08:38:53,825 | INFO     | . initial setup = 20 s
[2026-03-18 04:39:45] 2026-03-18 08:38:53,825 | INFO     | . payload setup = 23 s
[2026-03-18 04:39:45] 2026-03-18 08:38:53,826 | INFO     | . stage-in = 0 s
[2026-03-18 04:39:45] 2026-03-18 08:38:53,826 | INFO     | . payload execution = 102832 s
[2026-03-18 04:39:45] 2026-03-18 08:38:53,826 | INFO     | . stage-out = 13 s
[2026-03-18 04:39:45] 2026-03-18 08:38:53,826 | INFO     | . log creation = 3 s
[2026-03-18 04:39:45] 2026-03-18 08:38:53,902 | INFO     | ..............................
[2026-03-18 04:39:45] 2026-03-18 08:38:54,150 | INFO     | 
[2026-03-18 04:39:45] 2026-03-18 08:38:54,150 | INFO     | job summary report
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | --------------------------------------------------
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | PanDA job id: 7056968865
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | task id: 49180657
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | errors: (none)
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | pilot state: finished 
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | transexitcode: 0
[2026-03-18 04:39:45] 2026-03-18 08:38:54,151 | INFO     | exeerrorcode: 0
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | exeerrordiag: 
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | exitcode: 0
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | exitmsg: OK
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | cpuconsumptiontime: 132509 s
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | nevents: 400
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | neventsw: 0
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | pid: 2258405
[2026-03-18 04:39:45] 2026-03-18 08:38:54,152 | INFO     | pgrp: 2258405
[2026-03-18 04:39:45] 2026-03-18 08:38:54,153 | INFO     | corecount: 8
[2026-03-18 04:39:45] 2026-03-18 08:38:54,153 | INFO     | event service: False
[2026-03-18 04:39:45] 2026-03-18 08:38:54,153 | INFO     | sizes: {0: 2279864, 1: 2280325, 102863: 2350547, 102864: 2350546, 102878: 2359600, 102879: 2359656, 102887: 2359978}
[2026-03-18 04:39:45] 2026-03-18 08:38:54,153 | INFO     | --------------------------------------------------
[2026-03-18 04:39:45] 2026-03-18 08:38:54,153 | INFO     | 
[2026-03-18 04:39:45] 2026-03-18 08:38:54,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-18 04:39:45] 2026-03-18 08:38:54,324 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,325 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,325 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,325 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,327 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,327 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,327 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,327 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 04:39:45] 2026-03-18 08:38:54,327 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,327 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 04:39:45] 2026-03-18 08:38:54,327 | INFO     | job 7056968865 has completed (purged errors)
[2026-03-18 04:39:45] 2026-03-18 08:38:54,328 | INFO     | overall cleanup function is called
[2026-03-18 04:39:45] 2026-03-18 08:38:55,380 | INFO     | --- collectZombieJob: --- 10, [2258405]
[2026-03-18 04:39:45] 2026-03-18 08:38:55,380 | INFO     | zombie collector waiting for pid 2258405
[2026-03-18 04:39:45] 2026-03-18 08:38:55,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 04:39:45] 2026-03-18 08:38:55,381 | INFO     | collected zombie processes
[2026-03-18 04:39:45] 2026-03-18 08:38:55,381 | INFO     | will attempt to kill all subprocesses of pid=2258405
[2026-03-18 04:39:45] 2026-03-18 08:39:00,497 | INFO     | PID=2248736 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 04:39:45] 2026-03-18 08:39:00,497 | INFO     | .. there are 16 such processes running
[2026-03-18 04:39:45] 2026-03-18 08:39:00,629 | INFO     | process IDs to be killed: [2258405] (in reverse order)
[2026-03-18 04:39:45] 2026-03-18 08:39:00,715 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 04:39:45] 2026-03-18 08:39:00,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 04:39:45] 2026-03-18 08:39:00,836 | INFO     | did not find any defunct processes belonging to 2258405
[2026-03-18 04:39:45] 2026-03-18 08:39:00,896 | INFO     | did not find any defunct processes belonging to 2258405
[2026-03-18 04:39:45] 2026-03-18 08:39:00,897 | INFO     | ready for new job
[2026-03-18 04:39:45] 2026-03-18 08:39:00,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 04:39:45] 2026-03-18 08:39:00,975 | INFO     | **************************************
[2026-03-18 04:39:45] 2026-03-18 08:39:00,975 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 04:39:45] 2026-03-18 08:39:00,975 | INFO     | **************************************
[2026-03-18 04:39:45] 2026-03-18 08:39:00,975 | INFO     | 
[2026-03-18 04:39:45] 2026-03-18 08:39:01,005 | INFO     | architecture information:
[2026-03-18 04:39:45] 2026-03-18 08:39:01,012 | INFO     | executing command: cat /etc/os-release
[2026-03-18 04:39:45] 2026-03-18 08:39:01,157 | INFO     | cat /etc/os-release:
[2026-03-18 04:39:45] NAME="CentOS Linux"
[2026-03-18 04:39:45] VERSION="7 (Core)"
[2026-03-18 04:39:45] ID="centos"
[2026-03-18 04:39:45] ID_LIKE="rhel fedora"
[2026-03-18 04:39:45] VERSION_ID="7"
[2026-03-18 04:39:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 04:39:45] ANSI_COLOR="0;31"
[2026-03-18 04:39:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 04:39:45] HOME_URL="https://www.centos.org/"
[2026-03-18 04:39:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 04:39:45] 
[2026-03-18 04:39:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 04:39:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 04:39:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 04:39:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 04:39:45] 
[2026-03-18 04:39:45] 2026-03-18 08:39:01,158 | INFO     | **************************************
[2026-03-18 04:39:45] 2026-03-18 08:39:01,680 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-18 04:39:45] 2026-03-18 08:39:01,768 | INFO     | sufficient remaining disk space (52141490176 B)
[2026-03-18 04:39:45] 2026-03-18 08:39:01,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 04:39:45] 2026-03-18 08:39:01,769 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 04:39:45] 2026-03-18 08:39:01,769 | INFO     | update_server=False
[2026-03-18 04:39:45] 2026-03-18 08:39:01,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 04:39:45] 2026-03-18 08:39:01,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 04:39:45] 2026-03-18 08:39:01,778 | INFO     | aborting loop
[2026-03-18 04:39:45] 2026-03-18 08:39:01,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 04:39:45] 2026-03-18 08:39:01,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 04:39:45] 2026-03-18 08:39:02,669 | INFO     | all payload control threads have been joined
[2026-03-18 04:39:45] 2026-03-18 08:39:02,775 | INFO     | [job] retrieve thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:02,784 | INFO     | [job] job monitor thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:02,823 | INFO     | all data control threads have been joined
[2026-03-18 04:39:45] 2026-03-18 08:39:02,981 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:02,982 | INFO     | [data] copytool_in thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:03,136 | INFO     | all job control threads have been joined
[2026-03-18 04:39:45] 2026-03-18 08:39:03,438 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:03,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 04:39:45] 2026-03-18 08:39:03,659 | INFO     | [payload] failed_post thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:03,675 | INFO     | [payload] control thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:03,810 | INFO     | [data] copytool_out thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:03,829 | INFO     | [data] control thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:03,928 | INFO     | [payload] validate_post thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:04,161 | INFO     | [job] control thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:04,191 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:04,196 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:04,217 | INFO     | [job] validate thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:04,473 | INFO     | [job] queue monitor thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:05,794 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 04:39:45] 2026-03-18 08:39:31,774 | INFO     | [monitor] cgroup control has ended
[2026-03-18 04:39:45] 2026-03-18 08:39:33,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659187406656)>', '<ExcThread(monitor, started 139658646255360)>']
[2026-03-18 04:39:45] 2026-03-18 08:39:38,127 | INFO     | PID=2248736 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 04:39:45] 2026-03-18 08:39:38,127 | INFO     | .. there are 16 such processes running
[2026-03-18 04:39:45] 2026-03-18 08:39:38,127 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 04:39:45] 2026-03-18 08:39:38,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 04:39:45] 2026-03-18 08:39:38,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 04:39:45] 2026-03-18 08:39:38,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 04:39:45] 2026-03-18 08:39:38,128 | INFO     | [monitor] control thread has ended
[2026-03-18 04:39:45] 2026-03-18 08:39:38,934 | INFO     | all workflow threads have been joined
[2026-03-18 04:39:45] 2026-03-18 08:39:38,934 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 04:39:45] 2026-03-18 08:39:38,935 | INFO     | traces error code: 0
[2026-03-18 04:39:45] 2026-03-18 08:39:38,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 04:39:45] 2026-03-18 08:39:42,047 [wrapper] ==== pilot stdout END ====
[2026-03-18 04:39:45] 2026-03-18 08:39:42,092 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 04:39:45] 2026-03-18 08:39:42,185 [wrapper] pilotpid: 2248736
[2026-03-18 04:39:45] 2026-03-18 08:39:42,228 [wrapper] Pilot exit status: 0
[2026-03-18 04:39:45] 2026-03-18 08:39:42,388 [wrapper] pandaids: 7056968865
[2026-03-18 04:39:45] 2026-03-18 08:39:43,887 [wrapper] cleanup supervisor_pilot 1245051 2248737
[2026-03-18 04:39:45] 2026-03-18 08:39:43,992 [wrapper] Test setup, not cleaning
[2026-03-18 04:39:45] 2026-03-18 08:39:44,075 [wrapper] apfmon messages muted
[2026-03-18 04:39:45] 2026-03-18 08:39:44,106 [wrapper] ==== wrapper stdout END ====
[2026-03-18 04:39:45] 2026-03-18 08:39:44,138 [wrapper] ==== wrapper stderr END ====
[2026-03-18 04:39:45]  *** Error codes and diagnostics ***
[2026-03-18 04:39:45]     "exeErrorCode": 0,
[2026-03-18 04:39:45]     "exeErrorDiag": "",
[2026-03-18 04:39:45]     "pilotErrorCode": 0,
[2026-03-18 04:39:45]     "pilotErrorDiag": "",
[2026-03-18 04:39:45]  *** Listing of results directory ***
[2026-03-18 04:39:45] total 515972
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas    585013 Mar 16 11:57 pilot3.tar.gz
[2026-03-18 04:39:45] -rwx------. 1 boincer umatlas     36322 Mar 16 11:58 runpilot2-wrapper.sh
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas      5111 Mar 16 12:00 queuedata.json
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas       100 Mar 17 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 04:39:45] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 17 00:03 run_atlas
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas       105 Mar 17 00:03 job.xml
[2026-03-18 04:39:45] -rw-r--r--. 2 boincer umatlas 250620607 Mar 17 00:03 EVNT.49133633._000014.pool.root.1
[2026-03-18 04:39:45] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 00:03 start_atlas.sh
[2026-03-18 04:39:45] drwxrwx--x. 2 boincer umatlas      4096 Mar 17 00:03 shared
[2026-03-18 04:39:45] -rw-r--r--. 2 boincer umatlas    597542 Mar 17 00:03 input.tar.gz
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas         0 Mar 17 00:03 boinc_lockfile
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas      2613 Mar 17 00:03 pandaJob.out
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas        57 Mar 17 00:03 setup.sh.local
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas   1006418 Mar 17 00:03 agis_schedconf.cvmfs.json
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas       430 Mar 17 00:04 workernode_map.json
[2026-03-18 04:39:45] drwx------. 5 boincer umatlas      4096 Mar 17 00:04 pilot3
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas 246690234 Mar 18 04:30 HITS.49180657._000331.pool.root.1
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas       531 Mar 18 04:31 boinc_task_state.xml
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas      6662 Mar 18 04:37 init_data.xml
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas      1046 Mar 18 04:38 memory_monitor_summary.json
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas   1511579 Mar 18 04:38 agis_ddmendpoints.agis.ALL.json
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas   1516088 Mar 18 04:38 log.49180657._000331.job.log.tgz.1
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas        95 Mar 18 04:38 pilot_heartbeat.json
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas      6391 Mar 18 04:38 heartbeat.json
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas        29 Mar 18 04:39 wrapper_checkpoint.txt
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas      8192 Mar 18 04:39 boinc_mmap_file
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas      4820 Mar 18 04:39 pilotlog.txt
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas  12035919 Mar 18 04:39 log.49180657._000331.job.log.1
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas       357 Mar 18 04:39 output.list
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas       620 Mar 18 04:39 runtime_log
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas  13568000 Mar 18 04:39 result.tar.gz
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas      9343 Mar 18 04:39 runtime_log.err
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas       661 Mar 18 04:39 QqBMDm9VPM9n9Rq4apOajLDm4fhM0noT9bVooX4SDmz4uLDmGYi2Zm.diag
[2026-03-18 04:39:45] -rw-r--r--. 1 boincer umatlas     21087 Mar 18 04:39 stderr.txt
[2026-03-18 04:39:45] HITS file was successfully produced:
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas 246690234 Mar 18 04:30 shared/HITS.pool.root.1
[2026-03-18 04:39:45]  *** Contents of shared directory: ***
[2026-03-18 04:39:45] total 499516
[2026-03-18 04:39:45] -rw-r--r--. 2 boincer umatlas 250620607 Mar 17 00:03 ATLAS.root_0
[2026-03-18 04:39:45] -rw-r--r--. 2 boincer umatlas     15845 Mar 17 00:03 start_atlas.sh
[2026-03-18 04:39:45] -rw-r--r--. 2 boincer umatlas    597542 Mar 17 00:03 input.tar.gz
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas 246690234 Mar 18 04:30 HITS.pool.root.1
[2026-03-18 04:39:45] -rw-------. 1 boincer umatlas  13568000 Mar 18 04:39 result.tar.gz
04:39:46 (2244955): run_atlas exited; CPU time 135734.989336
04:39:46 (2244955): called boinc_finish(0)

</stderr_txt>
]]>

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