Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:17:37 (29742): wrapper (7.7.26015): starting
20:17:37 (29742): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 20:17:37] Arguments: --nthreads 8
[2026-03-17 20:17:37] Threads: 8
[2026-03-17 20:17:37] Checking for CVMFS
[2026-03-17 20:17:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 20:17:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 20:17:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 20:17:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 20:17:38] 2.11.2.0 28330 132303 140992 157384 3 294 23931642 25165825 663 130560 157 38459335 99.823 28181668 928 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-17 20:17:38] CVMFS is ok
[2026-03-17 20:17:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 20:17:38] Checking for apptainer binary...
[2026-03-17 20:17:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 20:17:38] Running /usr/bin/apptainer --version
[2026-03-17 20:17:38] apptainer version 1.3.2-1.el7
[2026-03-17 20:17:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 20:17:40] cg-vwn377.simple-grid.lan
[2026-03-17 20:17:40] apptainer works
[2026-03-17 20:17:40] Set ATHENA_PROC_NUMBER=8
[2026-03-17 20:17:40] Set ATHENA_CORE_NUMBER=8
[2026-03-17 20:17:40] Starting ATLAS job with PandaID=7056960843
[2026-03-17 20:17:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 05:23:12]  *** The last 200 lines of the pilot log: ***
[2026-03-18 05:23:12] 2026-03-18 04:22:22,782 | INFO     | log transfer has been attempted: DONE
[2026-03-18 05:23:12] 2026-03-18 04:22:22,782 | INFO     | job 7056960843 has finished - writing final server update
[2026-03-18 05:23:12] 2026-03-18 04:22:22,783 | INFO     | total number of processed events: 400 (read)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,788 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7056960843/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,789 | INFO     | extracted standard info from prmon json
[2026-03-18 05:23:12] 2026-03-18 04:22:22,789 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 05:23:12] 2026-03-18 04:22:22,789 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 05:23:12] 2026-03-18 04:22:22,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 05:23:12] 2026-03-18 04:22:22,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 05:23:12] 2026-03-18 04:22:22,800 | INFO     | fitting pss+swap vs Time
[2026-03-18 05:23:12] 2026-03-18 04:22:22,802 | INFO     | sum of square deviations: 47483011220.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,811 | INFO     | sum of deviations: -66164842427.999985
[2026-03-18 05:23:12] 2026-03-18 04:22:22,811 | INFO     | mean x: 1773791392.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,811 | INFO     | mean y: 2537195.902803738
[2026-03-18 05:23:12] 2026-03-18 04:22:22,811 | INFO     | intersect: 2474213379.370908
[2026-03-18 05:23:12] 2026-03-18 04:22:22,812 | INFO     | chi2: 2.5660301090060207
[2026-03-18 05:23:12] 2026-03-18 04:22:22,813 | INFO     | sum of square deviations: 46164112072.5
[2026-03-18 05:23:12] 2026-03-18 04:22:22,822 | INFO     | sum of deviations: -29683510150.49998
[2026-03-18 05:23:12] 2026-03-18 04:22:22,822 | INFO     | mean x: 1773791239.5
[2026-03-18 05:23:12] 2026-03-18 04:22:22,822 | INFO     | mean y: 2541382.530188679
[2026-03-18 05:23:12] 2026-03-18 04:22:22,822 | INFO     | intersect: 1143088614.9750912
[2026-03-18 05:23:12] 2026-03-18 04:22:22,823 | INFO     | chi2: 1.7934902397743622
[2026-03-18 05:23:12] 2026-03-18 04:22:22,823 | INFO     | current chi2=1.7934902397743622 (change=30.106422622254815 %)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,824 | INFO     | sum of square deviations: 44869864550.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,833 | INFO     | sum of deviations: -30025108899.999996
[2026-03-18 05:23:12] 2026-03-18 04:22:22,833 | INFO     | mean x: 1773791087.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,834 | INFO     | mean y: 2541342.219047619
[2026-03-18 05:23:12] 2026-03-18 04:22:22,834 | INFO     | intersect: 1189491004.0277405
[2026-03-18 05:23:12] 2026-03-18 04:22:22,834 | INFO     | chi2: 1.7929464070847647
[2026-03-18 05:23:12] 2026-03-18 04:22:22,835 | INFO     | current chi2=1.7929464070847647 (change=0.030322589860643782 %)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,835 | INFO     | right removable region: 524
[2026-03-18 05:23:12] 2026-03-18 04:22:22,836 | INFO     | sum of square deviations: 46164112072.5
[2026-03-18 05:23:12] 2026-03-18 04:22:22,844 | INFO     | sum of deviations: -150572457553.50003
[2026-03-18 05:23:12] 2026-03-18 04:22:22,845 | INFO     | mean x: 1773791544.5
[2026-03-18 05:23:12] 2026-03-18 04:22:22,845 | INFO     | mean y: 2546915.2924528304
[2026-03-18 05:23:12] 2026-03-18 04:22:22,845 | INFO     | intersect: 5788083342.886514
[2026-03-18 05:23:12] 2026-03-18 04:22:22,846 | INFO     | chi2: 1.112856922194576
[2026-03-18 05:23:12] 2026-03-18 04:22:22,846 | INFO     | current chi2=1.112856922194576 (change=56.6311822184482 %)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,847 | INFO     | sum of square deviations: 44869864550.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,855 | INFO     | sum of deviations: -160923115216.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,855 | INFO     | mean x: 1773791697.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,856 | INFO     | mean y: 2548134.84
[2026-03-18 05:23:12] 2026-03-18 04:22:22,856 | INFO     | intersect: 6364147138.720104
[2026-03-18 05:23:12] 2026-03-18 04:22:22,857 | INFO     | chi2: 1.0890818129496438
[2026-03-18 05:23:12] 2026-03-18 04:22:22,857 | INFO     | current chi2=1.0890818129496438 (change=2.136403051530409 %)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,857 | INFO     | left removable region: 20
[2026-03-18 05:23:12] 2026-03-18 04:22:22,858 | INFO     | sum of square deviations: 39697972230.0
[2026-03-18 05:23:12] 2026-03-18 04:22:22,865 | INFO     | sum of deviations: -97289711178.00002
[2026-03-18 05:23:12] 2026-03-18 04:22:22,866 | INFO     | mean x: 1773791666.5
[2026-03-18 05:23:12] 2026-03-18 04:22:22,866 | INFO     | mean y: 2549251.992063492
[2026-03-18 05:23:12] 2026-03-18 04:22:22,866 | INFO     | intersect: 4349664966.716526
[2026-03-18 05:23:12] 2026-03-18 04:22:22,867 | INFO     | chi2: 0.2826096907762954
[2026-03-18 05:23:12] 2026-03-18 04:22:22,867 | INFO     | current memory leak: -2.45 B/s (using 504 data points, chi2=0.28)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,868 | INFO     | could have reported an average CPU frequency of 1999 MHz (22 samples)
[2026-03-18 05:23:12] 2026-03-18 04:22:22,868 | INFO     | ..............................
[2026-03-18 05:23:12] 2026-03-18 04:22:22,868 | INFO     | . Timing measurements:
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | . get job = 0 s
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | . initial setup = 8 s
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | . payload setup = 9 s
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | . stage-in = 0 s
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | . payload execution = 32633 s
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | . stage-out = 4 s
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | . log creation = 1 s
[2026-03-18 05:23:12] 2026-03-18 04:22:22,869 | INFO     | ..............................
[2026-03-18 05:23:12] 2026-03-18 04:22:23,121 | INFO     | 
[2026-03-18 05:23:12] 2026-03-18 04:22:23,121 | INFO     | job summary report
[2026-03-18 05:23:12] 2026-03-18 04:22:23,121 | INFO     | --------------------------------------------------
[2026-03-18 05:23:12] 2026-03-18 04:22:23,121 | INFO     | PanDA job id: 7056960843
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | task id: 49180110
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | errors: (none)
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | pilot state: finished 
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | transexitcode: 0
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | exeerrorcode: 0
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | exeerrordiag: 
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | exitcode: 0
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | exitmsg: OK
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | cpuconsumptiontime: 135596 s
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | nevents: 400
[2026-03-18 05:23:12] 2026-03-18 04:22:23,122 | INFO     | neventsw: 0
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | pid: 5487
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | pgrp: 5487
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | corecount: 8
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | event service: False
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | sizes: {0: 2279832, 1: 2280293, 2: 2280293, 32647: 2319132, 32652: 2328130, 32654: 2328186, 32655: 2328508}
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | --------------------------------------------------
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | 
[2026-03-18 05:23:12] 2026-03-18 04:22:23,123 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-03-18 05:23:12] 2026-03-18 04:22:23,558 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,559 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,559 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,559 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,561 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 05:23:12] 2026-03-18 04:22:23,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 05:23:12] 2026-03-18 04:22:23,561 | INFO     | job 7056960843 has completed (purged errors)
[2026-03-18 05:23:12] 2026-03-18 04:22:23,561 | INFO     | overall cleanup function is called
[2026-03-18 05:23:12] 2026-03-18 04:22:24,570 | INFO     | --- collectZombieJob: --- 10, [5487]
[2026-03-18 05:23:12] 2026-03-18 04:22:24,570 | INFO     | zombie collector waiting for pid 5487
[2026-03-18 05:23:12] 2026-03-18 04:22:24,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 05:23:12] 2026-03-18 04:22:24,571 | INFO     | collected zombie processes
[2026-03-18 05:23:12] 2026-03-18 04:22:24,571 | INFO     | will attempt to kill all subprocesses of pid=5487
[2026-03-18 05:23:12] 2026-03-18 04:22:24,660 | INFO     | process IDs to be killed: [5487] (in reverse order)
[2026-03-18 05:23:12] 2026-03-18 04:22:25,613 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 05:23:12] 2026-03-18 04:22:25,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 05:23:12] 2026-03-18 04:22:25,616 | INFO     | did not find any defunct processes belonging to 5487
[2026-03-18 05:23:12] 2026-03-18 04:22:25,617 | INFO     | did not find any defunct processes belonging to 5487
[2026-03-18 05:23:12] 2026-03-18 04:22:25,618 | INFO     | ready for new job
[2026-03-18 05:23:12] 2026-03-18 04:22:25,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 05:23:12] 2026-03-18 04:22:25,620 | INFO     | **************************************
[2026-03-18 05:23:12] 2026-03-18 04:22:25,621 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 05:23:12] 2026-03-18 04:22:25,621 | INFO     | **************************************
[2026-03-18 05:23:12] 2026-03-18 04:22:25,621 | INFO     | 
[2026-03-18 05:23:12] 2026-03-18 04:22:25,621 | INFO     | pilot is running in a VM
[2026-03-18 05:23:12] 2026-03-18 04:22:25,622 | INFO     | architecture information:
[2026-03-18 05:23:12] 2026-03-18 04:22:25,630 | INFO     | executing command: cat /etc/os-release
[2026-03-18 05:23:12] 2026-03-18 04:22:25,894 | INFO     | cat /etc/os-release:
[2026-03-18 05:23:12] NAME="CentOS Linux"
[2026-03-18 05:23:12] VERSION="7 (Core)"
[2026-03-18 05:23:12] ID="centos"
[2026-03-18 05:23:12] ID_LIKE="rhel fedora"
[2026-03-18 05:23:12] VERSION_ID="7"
[2026-03-18 05:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 05:23:12] ANSI_COLOR="0;31"
[2026-03-18 05:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 05:23:12] HOME_URL="https://www.centos.org/"
[2026-03-18 05:23:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 05:23:12] 
[2026-03-18 05:23:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 05:23:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 05:23:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 05:23:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 05:23:12] 
[2026-03-18 05:23:12] 2026-03-18 04:22:25,895 | INFO     | **************************************
[2026-03-18 05:23:12] 2026-03-18 04:22:26,398 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-03-18 05:23:12] 2026-03-18 04:22:26,635 | INFO     | sufficient remaining disk space (496539533312 B)
[2026-03-18 05:23:12] 2026-03-18 04:22:26,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 05:23:12] 2026-03-18 04:22:26,636 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 05:23:12] 2026-03-18 04:22:26,636 | INFO     | update_server=False
[2026-03-18 05:23:12] 2026-03-18 04:22:26,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 05:23:12] 2026-03-18 04:22:27,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 05:23:12] 2026-03-18 04:22:27,060 | INFO     | aborting loop
[2026-03-18 05:23:12] 2026-03-18 04:22:27,443 | INFO     | all data control threads have been joined
[2026-03-18 05:23:12] 2026-03-18 04:22:27,584 | INFO     | all payload control threads have been joined
[2026-03-18 05:23:12] 2026-03-18 04:22:27,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 05:23:12] 2026-03-18 04:22:27,642 | INFO     | [job] retrieve thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:27,688 | INFO     | [payload] failed_post thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:27,831 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:27,837 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:27,838 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:27,898 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:28,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 05:23:12] 2026-03-18 04:22:28,021 | INFO     | all job control threads have been joined
[2026-03-18 05:23:12] 2026-03-18 04:22:28,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 05:23:12] 2026-03-18 04:22:28,066 | INFO     | [job] job monitor thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:28,290 | INFO     | [job] validate thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:28,305 | INFO     | [data] copytool_in thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:28,449 | INFO     | [data] control thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:28,590 | INFO     | [payload] control thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:29,017 | INFO     | [job] queue monitor thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:29,027 | INFO     | [job] control thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:29,030 | INFO     | [payload] validate_post thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:30,064 | INFO     | [data] copytool_out thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:31,630 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 05:23:12] 2026-03-18 04:22:54,760 | INFO     | PID=1042 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-18 05:23:12] 2026-03-18 04:22:54,760 | INFO     | .. there are 2 such processes running
[2026-03-18 05:23:12] 2026-03-18 04:22:54,760 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 05:23:12] 2026-03-18 04:22:54,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 05:23:12] 2026-03-18 04:22:54,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 05:23:12] 2026-03-18 04:23:02,428 | INFO     | [monitor] cgroup control has ended
[2026-03-18 05:23:12] 2026-03-18 04:23:03,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999925069632)>', '<ExcThread(monitor, started 139999315994368)>']
[2026-03-18 05:23:12] 2026-03-18 04:23:03,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 05:23:12] 2026-03-18 04:23:03,816 | INFO     | [monitor] control thread has ended
[2026-03-18 05:23:12] 2026-03-18 04:23:08,461 | INFO     | all workflow threads have been joined
[2026-03-18 05:23:12] 2026-03-18 04:23:08,461 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 05:23:12] 2026-03-18 04:23:08,461 | INFO     | traces error code: 0
[2026-03-18 05:23:12] 2026-03-18 04:23:08,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 05:23:12] 2026-03-18 04:23:08,974 [wrapper] ==== pilot stdout END ====
[2026-03-18 05:23:12] 2026-03-18 04:23:09,047 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 05:23:12] 2026-03-18 04:23:09,143 [wrapper] pilotpid: 1042
[2026-03-18 05:23:12] 2026-03-18 04:23:09,258 [wrapper] Pilot exit status: 0
[2026-03-18 05:23:12] 2026-03-18 04:23:09,755 [wrapper] pandaids: 7056960843
[2026-03-18 05:23:12] 2026-03-18 04:23:10,810 [wrapper] cleanup supervisor_pilot 28686 1043
[2026-03-18 05:23:12] 2026-03-18 04:23:10,922 [wrapper] Test setup, not cleaning
[2026-03-18 05:23:12] 2026-03-18 04:23:11,030 [wrapper] apfmon messages muted
[2026-03-18 05:23:12] 2026-03-18 04:23:11,125 [wrapper] ==== wrapper stdout END ====
[2026-03-18 05:23:12] 2026-03-18 04:23:11,208 [wrapper] ==== wrapper stderr END ====
[2026-03-18 05:23:12]  *** Error codes and diagnostics ***
[2026-03-18 05:23:12]     "exeErrorCode": 0,
[2026-03-18 05:23:12]     "exeErrorDiag": "",
[2026-03-18 05:23:12]     "pilotErrorCode": 0,
[2026-03-18 05:23:12]     "pilotErrorDiag": "",
[2026-03-18 05:23:12]  *** Listing of results directory ***
[2026-03-18 05:23:12] total 487512
[2026-03-18 05:23:12] -rwx------. 1 boinc boinc     36322 Mar 16 16:27 runpilot2-wrapper.sh
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:28 pilot3.tar.gz
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:30 queuedata.json
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc       100 Mar 17 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 05:23:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 20:17 run_atlas
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc       105 Mar 17 20:17 job.xml
[2026-03-18 05:23:12] -rw-r--r--. 2 boinc boinc 245602404 Mar 17 20:17 EVNT.49132718._000003.pool.root.1
[2026-03-18 05:23:12] -rw-r--r--. 2 boinc boinc    597534 Mar 17 20:17 input.tar.gz
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc      6391 Mar 17 20:17 init_data.xml
[2026-03-18 05:23:12] -rw-r--r--. 2 boinc boinc     15845 Mar 17 20:17 start_atlas.sh
[2026-03-18 05:23:12] drwxrwx--x. 2 boinc boinc        68 Mar 17 20:17 shared
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc         0 Mar 17 20:17 boinc_lockfile
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc      2587 Mar 17 20:17 pandaJob.out
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc   1010308 Mar 17 20:17 agis_schedconf.cvmfs.json
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc       415 Mar 17 20:18 workernode_map.json
[2026-03-18 05:23:12] drwx------. 5 boinc boinc      4096 Mar 17 20:18 pilot3
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc 239248981 Mar 18 05:20 HITS.49180110._000053.pool.root.1
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc       531 Mar 18 05:20 boinc_task_state.xml
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc      1018 Mar 18 05:22 memory_monitor_summary.json
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc   1511579 Mar 18 05:22 agis_ddmendpoints.agis.ALL.json
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc        95 Mar 18 05:22 pilot_heartbeat.json
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc    703705 Mar 18 05:22 log.49180110._000053.job.log.tgz.1
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc      6322 Mar 18 05:22 heartbeat.json
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc      4879 Mar 18 05:23 pilotlog.txt
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc      8192 Mar 18 05:23 boinc_mmap_file
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc        29 Mar 18 05:23 wrapper_checkpoint.txt
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc   4515956 Mar 18 05:23 log.49180110._000053.job.log.1
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc       357 Mar 18 05:23 output.list
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc       620 Mar 18 05:23 runtime_log
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc   5232640 Mar 18 05:23 result.tar.gz
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc      8816 Mar 18 05:23 runtime_log.err
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc       658 Mar 18 05:23 PSSNDmu1OM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmf7xLDmk61pfn.diag
[2026-03-18 05:23:12] -rw-r--r--. 1 boinc boinc     20689 Mar 18 05:23 stderr.txt
[2026-03-18 05:23:12] HITS file was successfully produced:
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc 239248981 Mar 18 05:20 shared/HITS.pool.root.1
[2026-03-18 05:23:12]  *** Contents of shared directory: ***
[2026-03-18 05:23:12] total 479204
[2026-03-18 05:23:12] -rw-r--r--. 2 boinc boinc 245602404 Mar 17 20:17 ATLAS.root_0
[2026-03-18 05:23:12] -rw-r--r--. 2 boinc boinc    597534 Mar 17 20:17 input.tar.gz
[2026-03-18 05:23:12] -rw-r--r--. 2 boinc boinc     15845 Mar 17 20:17 start_atlas.sh
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc 239248981 Mar 18 05:20 HITS.pool.root.1
[2026-03-18 05:23:12] -rw-------. 1 boinc boinc   5232640 Mar 18 05:23 result.tar.gz
05:23:14 (29742): run_atlas exited; CPU time 135956.089507
05:23:14 (29742): called boinc_finish(0)

</stderr_txt>
]]>

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