Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:22:07 (411512): wrapper (7.7.26015): starting
14:22:07 (411512): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 14:22:07] Arguments: --nthreads 12
[2026-03-16 14:22:07] Threads: 12
[2026-03-16 14:22:07] Checking for CVMFS
[2026-03-16 14:22:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 14:22:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 14:22:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 14:22:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 14:22:08] 2.11.5.0 3294435 152125 289756 157351 2 1219 24930439 45568001 14637 130560 0 1035752243 99.793 640105939 18461 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-16 14:22:08] CVMFS is ok
[2026-03-16 14:22:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 14:22:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 14:22:08] Further information can be found at the LHC@home message board.
[2026-03-16 14:22:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 14:22:08] Checking for apptainer binary...
[2026-03-16 14:22:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 14:22:08] Running /usr/bin/apptainer --version
[2026-03-16 14:22:08] apptainer version 1.4.1-1.el9
[2026-03-16 14:22:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 14:22:09] wns0052.triumf.lcg
[2026-03-16 14:22:09] apptainer works
[2026-03-16 14:22:09] Set ATHENA_PROC_NUMBER=12
[2026-03-16 14:22:09] Set ATHENA_CORE_NUMBER=12
[2026-03-16 14:22:09] Starting ATLAS job with PandaID=7056975408
[2026-03-16 14:22:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 14:26:51]  *** The last 200 lines of the pilot log: ***
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | WARNING  | wrong length of table data, x=[1773696206.0], y=[1573.0] (must be same and length>=4)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | ..............................
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . Timing measurements:
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . get job = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . initial setup = 19 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . payload setup = 20 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . stage-in = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . payload execution = 46 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . stage-out = 1 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . log creation = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | ..............................
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 14:26:51] 2026-03-16 21:26:02,793 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056975408/pilotlog.txt
[2026-03-16 14:26:51] 2026-03-16 21:26:03,066 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-16 14:26:51] - Log from pilotlog.txt -
[2026-03-16 14:26:51] 2026-03-16 21:26:02,777 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7056975408/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | INFO     | extracted standard info from prmon json
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | WARNING  | wrong length of table data, x=[1773696206.0], y=[1573.0] (must be same and length>=4)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | ..............................
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . Timing measurements:
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . get job = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . initial setup = 19 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . payload setup = 20 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . stage-in = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . payload execution = 46 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . stage-out = 1 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . log creation = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | ..............................
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 14:26:51] 2026-03-16 21:26:02,793 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056975408/pilotlog.txt
[2026-03-16 14:26:51] 2026-03-16 21:26:03,066 | WARNING  | 
[2026-03-16 14:26:51] [begin log extracts]
[2026-03-16 14:26:51] - Log from pilotlog.txt -
[2026-03-16 14:26:51] 2026-03-16 21:26:02,777 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7056975408/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | INFO     | extracted standard info from prmon json
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 14:26:51] 2026-03-16 21:26:02,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | WARNING  | wrong length of table data, x=[1773696206.0], y=[1573.0] (must be same and length>=4)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,779 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | ..............................
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . Timing measurements:
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . get job = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . initial setup = 19 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . payload setup = 20 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . stage-in = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . payload execution = 46 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . stage-out = 1 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | . log creation = 0 s
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | ..............................
[2026-03-16 14:26:51] 2026-03-16 21:26:02,792 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 14:26:51] 2026-03-16 21:26:02,793 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056975408/pilotlog.txt
[2026-03-16 14:26:51] [end log extracts]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,066 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-16 14:26:51] 2026-03-16 21:26:03,067 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-16 14:26:51] 2026-03-16 21:26:03,146 | INFO     | time since job start (200s) is within the limit (345600.0s)
[2026-03-16 14:26:51] 2026-03-16 21:26:03,218 | INFO     | 
[2026-03-16 14:26:51] 2026-03-16 21:26:03,218 | INFO     | job summary report
[2026-03-16 14:26:51] 2026-03-16 21:26:03,218 | INFO     | --------------------------------------------------
[2026-03-16 14:26:51] 2026-03-16 21:26:03,218 | INFO     | PanDA job id: 7056975408
[2026-03-16 14:26:51] 2026-03-16 21:26:03,218 | INFO     | task id: 49181388
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-16 14:23:54,529 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | pilot state: failed 
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | transexitcode: 65
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | exeerrorcode: 65
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | exitcode: 65
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | cpuconsumptiontime: 16 s
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | nevents: 0
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | neventsw: 0
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | pid: 419776
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | pgrp: 419776
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | corecount: 12
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | event service: False
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | sizes: {0: 2280234, 1: 2280294, 11: 2280322, 71: 2303588, 72: 2307908, 188: 2308046}
[2026-03-16 14:26:51] 2026-03-16 21:26:03,219 | INFO     | --------------------------------------------------
[2026-03-16 14:26:51] 2026-03-16 21:26:03,220 | INFO     | 
[2026-03-16 14:26:51] 2026-03-16 21:26:03,220 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-16 14:26:51] 2026-03-16 21:26:03,236 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,236 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,236 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,237 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 14:26:51] 2026-03-16 21:26:03,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 14:26:51] 2026-03-16 21:26:03,238 | INFO     | job 7056975408 has completed (purged errors)
[2026-03-16 14:26:51] 2026-03-16 21:26:03,238 | INFO     | overall cleanup function is called
[2026-03-16 14:26:51] 2026-03-16 21:26:04,244 | INFO     | --- collectZombieJob: --- 10, [419776]
[2026-03-16 14:26:51] 2026-03-16 21:26:04,245 | INFO     | zombie collector waiting for pid 419776
[2026-03-16 14:26:51] 2026-03-16 21:26:04,245 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 14:26:51] 2026-03-16 21:26:04,245 | INFO     | collected zombie processes
[2026-03-16 14:26:51] 2026-03-16 21:26:04,245 | INFO     | will attempt to kill all subprocesses of pid=419776
[2026-03-16 14:26:51] 2026-03-16 21:26:04,986 | INFO     | process IDs to be killed: [419776] (in reverse order)
[2026-03-16 14:26:51] 2026-03-16 21:26:05,057 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 14:26:51] 2026-03-16 21:26:05,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 14:26:51] 2026-03-16 21:26:05,119 | INFO     | did not find any defunct processes belonging to 419776
[2026-03-16 14:26:51] 2026-03-16 21:26:05,168 | INFO     | did not find any defunct processes belonging to 419776
[2026-03-16 14:26:51] 2026-03-16 21:26:05,169 | INFO     | ready for new job
[2026-03-16 14:26:51] 2026-03-16 21:26:05,170 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 14:26:51] 2026-03-16 21:26:05,171 | INFO     | **************************************
[2026-03-16 14:26:51] 2026-03-16 21:26:05,172 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 14:26:51] 2026-03-16 21:26:05,172 | INFO     | **************************************
[2026-03-16 14:26:51] 2026-03-16 21:26:05,172 | INFO     | 
[2026-03-16 14:26:51] 2026-03-16 21:26:05,188 | INFO     | architecture information:
[2026-03-16 14:26:51] 2026-03-16 21:26:05,204 | INFO     | executing command: cat /etc/os-release
[2026-03-16 14:26:51] 2026-03-16 21:26:05,222 | INFO     | cat /etc/os-release:
[2026-03-16 14:26:51] NAME="CentOS Linux"
[2026-03-16 14:26:51] VERSION="7 (Core)"
[2026-03-16 14:26:51] ID="centos"
[2026-03-16 14:26:51] ID_LIKE="rhel fedora"
[2026-03-16 14:26:51] VERSION_ID="7"
[2026-03-16 14:26:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 14:26:51] ANSI_COLOR="0;31"
[2026-03-16 14:26:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 14:26:51] HOME_URL="https://www.centos.org/"
[2026-03-16 14:26:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 14:26:51] 
[2026-03-16 14:26:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 14:26:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 14:26:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 14:26:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 14:26:51] 
[2026-03-16 14:26:51] 2026-03-16 21:26:05,222 | INFO     | **************************************
[2026-03-16 14:26:51] 2026-03-16 21:26:05,727 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-16 14:26:51] 2026-03-16 21:26:05,803 | INFO     | sufficient remaining disk space (2167379329024 B)
[2026-03-16 14:26:51] 2026-03-16 21:26:05,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 14:26:51] 2026-03-16 21:26:05,803 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 14:26:51] 2026-03-16 21:26:05,803 | INFO     | update_server=False
[2026-03-16 14:26:51] 2026-03-16 21:26:05,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 14:26:51] 2026-03-16 21:26:05,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 14:26:51] 2026-03-16 21:26:05,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 14:26:51] 2026-03-16 21:26:05,886 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-16 14:26:51] 2026-03-16 21:26:05,887 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-16 14:26:51] 2026-03-16 21:26:05,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:26:51] 2026-03-16 21:26:05,887 | INFO     | will abort loop
[2026-03-16 14:26:51] 2026-03-16 21:26:05,898 | INFO     | all job control threads have been joined
[2026-03-16 14:26:51] 2026-03-16 21:26:06,139 | INFO     | all data control threads have been joined
[2026-03-16 14:26:51] 2026-03-16 21:26:06,302 | INFO     | all payload control threads have been joined
[2026-03-16 14:26:51] 2026-03-16 21:26:06,809 | INFO     | [job] retrieve thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:06,892 | INFO     | [job] job monitor thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:06,904 | INFO     | [job] control thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:06,955 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,145 | INFO     | [data] control thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,161 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,290 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,299 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,308 | INFO     | [payload] control thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,333 | INFO     | [data] copytool_in thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,434 | INFO     | [payload] failed_post thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:07,810 | INFO     | [data] copytool_out thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:08,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 14:26:51] 2026-03-16 21:26:08,243 | INFO     | [job] validate thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:08,287 | INFO     | [payload] validate_post thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:09,238 | INFO     | [job] queue monitor thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:09,890 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 14:26:51] 2026-03-16 21:26:36,727 | INFO     | PID=415191 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 14:26:51] 2026-03-16 21:26:36,727 | INFO     | .. there are 21 such processes running
[2026-03-16 14:26:51] 2026-03-16 21:26:36,727 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 14:26:51] 2026-03-16 21:26:36,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 14:26:51] 2026-03-16 21:26:36,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 14:26:51] 2026-03-16 21:26:43,276 | INFO     | [monitor] cgroup control has ended
[2026-03-16 14:26:51] 2026-03-16 21:26:44,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429850232640)>', '<ExcThread(monitor, started 140429165053696)>']
[2026-03-16 14:26:51] 2026-03-16 21:26:44,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 14:26:51] 2026-03-16 21:26:44,776 | INFO     | [monitor] control thread has ended
[2026-03-16 14:26:51] 2026-03-16 21:26:49,339 | INFO     | all workflow threads have been joined
[2026-03-16 14:26:51] 2026-03-16 21:26:49,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 14:26:51] 2026-03-16 21:26:49,340 | INFO     | traces error code: 0
[2026-03-16 14:26:51] 2026-03-16 21:26:49,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 14:26:51] 2026-03-16 21:26:49,800 [wrapper] ==== pilot stdout END ====
[2026-03-16 14:26:51] 2026-03-16 21:26:49,822 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 14:26:51] 2026-03-16 21:26:49,846 [wrapper] pilotpid: 415191
[2026-03-16 14:26:51] 2026-03-16 21:26:49,877 [wrapper] Pilot exit status: 0
[2026-03-16 14:26:51] 2026-03-16 21:26:50,009 [wrapper] pandaids: 7056975408
[2026-03-16 14:26:51] 2026-03-16 21:26:50,273 [wrapper] cleanup supervisor_pilot  415197 415192
[2026-03-16 14:26:51] 2026-03-16 21:26:50,286 [wrapper] Test setup, not cleaning
[2026-03-16 14:26:51] 2026-03-16 21:26:50,326 [wrapper] apfmon messages muted
[2026-03-16 14:26:51] 2026-03-16 21:26:50,349 [wrapper] ==== wrapper stdout END ====
[2026-03-16 14:26:51] 2026-03-16 21:26:50,400 [wrapper] ==== wrapper stderr END ====
[2026-03-16 14:26:51]  *** Error codes and diagnostics ***
[2026-03-16 14:26:51]     "exeErrorCode": 65,
[2026-03-16 14:26:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 14:26:51]     "pilotErrorCode": 1305,
[2026-03-16 14:26:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 14:26:51]  *** Listing of results directory ***
[2026-03-16 14:26:51] total 236340
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc      5111 Mar 16 10:24 queuedata.json
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc    585013 Mar 16 10:24 pilot3.tar.gz
[2026-03-16 14:26:51] -rwx------. 1 boinc boinc     36322 Mar 16 10:24 runpilot2-wrapper.sh
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc       100 Mar 16 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 14:26:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 14:22 run_atlas
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc       105 Mar 16 14:22 job.xml
[2026-03-16 14:26:51] -rw-r--r--. 2 boinc boinc 237868588 Mar 16 14:22 EVNT.49134998._000015.pool.root.1
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc      6589 Mar 16 14:22 init_data.xml
[2026-03-16 14:26:51] -rw-r--r--. 2 boinc boinc     15845 Mar 16 14:22 start_atlas.sh
[2026-03-16 14:26:51] drwxrwx--x. 2 boinc boinc      4096 Mar 16 14:22 shared
[2026-03-16 14:26:51] -rw-r--r--. 2 boinc boinc    597530 Mar 16 14:22 input.tar.gz
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc         0 Mar 16 14:22 boinc_lockfile
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc      2610 Mar 16 14:22 pandaJob.out
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc   1006429 Mar 16 14:22 agis_schedconf.cvmfs.json
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc   1511579 Mar 16 14:22 agis_ddmendpoints.agis.ALL.json
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc       445 Mar 16 14:22 workernode_map.json
[2026-03-16 14:26:51] drwx------. 5 boinc boinc      4096 Mar 16 14:22 pilot3
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc       524 Mar 16 14:23 boinc_task_state.xml
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc       950 Mar 16 14:24 memory_monitor_summary.json
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc     20670 Mar 16 14:24 log.49181388._000351.job.log.tgz.1
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc      7024 Mar 16 14:26 heartbeat.json
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc        95 Mar 16 14:26 pilot_heartbeat.json
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc      5004 Mar 16 14:26 pilotlog.txt
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc        22 Mar 16 14:26 wrapper_checkpoint.txt
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc     85401 Mar 16 14:26 log.49181388._000351.job.log.1
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc      8192 Mar 16 14:26 boinc_mmap_file
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc       188 Mar 16 14:26 output.list
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc       620 Mar 16 14:26 runtime_log
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc    122880 Mar 16 14:26 result.tar.gz
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc       643 Mar 16 14:26 V8sLDm4qQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmigyLDmIm5KPm.diag
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc      8635 Mar 16 14:26 runtime_log.err
[2026-03-16 14:26:51] -rw-r--r--. 1 boinc boinc     21806 Mar 16 14:26 stderr.txt
[2026-03-16 14:26:51] No HITS result produced
[2026-03-16 14:26:51]  *** Contents of shared directory: ***
[2026-03-16 14:26:51] total 233020
[2026-03-16 14:26:51] -rw-r--r--. 2 boinc boinc 237868588 Mar 16 14:22 ATLAS.root_0
[2026-03-16 14:26:51] -rw-r--r--. 2 boinc boinc     15845 Mar 16 14:22 start_atlas.sh
[2026-03-16 14:26:51] -rw-r--r--. 2 boinc boinc    597530 Mar 16 14:22 input.tar.gz
[2026-03-16 14:26:51] -rw-------. 1 boinc boinc    122880 Mar 16 14:26 result.tar.gz
14:26:53 (411512): run_atlas exited; CPU time 22.745276
14:26:53 (411512): called boinc_finish(0)

</stderr_txt>
]]>

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