Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:18:02 (3670587): wrapper (7.7.26015): starting
22:18:02 (3670587): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 22:18:02] Arguments: --nthreads 4
[2026-03-17 22:18:02] Threads: 4
[2026-03-17 22:18:02] Checking for CVMFS
[2026-03-17 22:18:02] No cvmfs_config command found, will try listing directly
[2026-03-17 22:18:02] CVMFS is ok
[2026-03-17 22:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 22:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 22:18:02] Further information can be found at the LHC@home message board.
[2026-03-17 22:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 22:18:02] Checking for apptainer binary...
[2026-03-17 22:18:02] which: no apptainer in ((null))
[2026-03-17 22:18:02] apptainer is not installed, using version from CVMFS
[2026-03-17 22:18:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 22:18:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot140/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-17 22:18:03] apptainer works
[2026-03-17 22:18:03] Set ATHENA_PROC_NUMBER=4
[2026-03-17 22:18:03] Set ATHENA_CORE_NUMBER=4
[2026-03-17 22:18:03] Starting ATLAS job with PandaID=7056958590
[2026-03-17 22:18:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot140/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 01:21:15]  *** The last 200 lines of the pilot log: ***
[2026-03-18 01:21:15] 2026-03-18 00:20:26,488 | INFO     | intersect: -25128695548.62499
[2026-03-18 01:21:15] 2026-03-18 00:20:26,488 | INFO     | chi2: 1.322506148133618
[2026-03-18 01:21:15] 2026-03-18 00:20:26,488 | INFO     | current chi2=1.322506148133618 (change=-0.06952667033170291 %)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,489 | INFO     | right removable region: 172
[2026-03-18 01:21:15] 2026-03-18 00:20:26,489 | INFO     | sum of square deviations: 1605470102.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,489 | INFO     | sum of deviations: 2175154348.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,489 | INFO     | mean x: 1773787931.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | mean y: 2340671.774566474
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | intersect: -2400857323.4656925
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | chi2: 0.009682579265032737
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | current chi2=0.009682579265032737 (change=99.26735227252652 %)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | sum of square deviations: 1470248962.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | sum of deviations: 4046009402.9999995
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | mean x: 1773788083.5
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | mean y: 2338559.226190476
[2026-03-18 01:21:15] 2026-03-18 00:20:26,490 | INFO     | intersect: -4878986611.041366
[2026-03-18 01:21:15] 2026-03-18 00:20:26,491 | INFO     | chi2: 0.003328921732966717
[2026-03-18 01:21:15] 2026-03-18 00:20:26,491 | INFO     | current chi2=0.003328921732966717 (change=65.61947347037326 %)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,491 | INFO     | sum of square deviations: 1342841922.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,491 | INFO     | sum of deviations: 4288210940.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,491 | INFO     | mean x: 1773788236.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,491 | INFO     | mean y: 2338291.527607362
[2026-03-18 01:21:15] 2026-03-18 00:20:26,491 | INFO     | intersect: -5662050043.571229
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | chi2: 0.0004773789860996427
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | current chi2=0.0004773789860996427 (change=85.65965125067075 %)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | sum of square deviations: 1223016419.5
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | sum of deviations: 3783201090.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | mean x: 1773788388.5
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | mean y: 2338933.8481012657
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | intersect: -5484585082.712531
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | chi2: 0.0004503114210547712
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | current chi2=0.0004503114210547712 (change=5.670036979638168 %)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,492 | INFO     | left removable region: 40
[2026-03-18 01:21:15] 2026-03-18 00:20:26,493 | INFO     | sum of square deviations: 713140813.0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,493 | INFO     | sum of deviations: 2139828607.5000007
[2026-03-18 01:21:15] 2026-03-18 00:20:26,493 | INFO     | mean x: 1773788815.5
[2026-03-18 01:21:15] 2026-03-18 00:20:26,493 | INFO     | mean y: 2340853.022727273
[2026-03-18 01:21:15] 2026-03-18 00:20:26,493 | INFO     | intersect: -5320035852.782836
[2026-03-18 01:21:15] 2026-03-18 00:20:26,493 | INFO     | chi2: 0.00036782320292404544
[2026-03-18 01:21:15] 2026-03-18 00:20:26,493 | INFO     | current memory leak: 3.00 B/s (using 132 data points, chi2=0.00)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | could have reported an average CPU frequency of 3542 MHz (10 samples)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | ..............................
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . Timing measurements:
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . get job = 0 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . initial setup = 17 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . payload setup = 20 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . stage-in = 0 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . payload execution = 10858 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . stage-out = 0 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | . log creation = 0 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,494 | INFO     | ..............................
[2026-03-18 01:21:15] 2026-03-18 00:20:26,547 | INFO     | 
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | job summary report
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | --------------------------------------------------
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | PanDA job id: 7056958590
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | task id: 49179724
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | errors: (none)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | pilot state: finished 
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | transexitcode: 0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | exeerrorcode: 0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | exeerrordiag: 
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | exitcode: 0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | exitmsg: OK
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | cpuconsumptiontime: 40335 s
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | nevents: 400
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | neventsw: 0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | pid: 3701303
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | pgrp: 3701303
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | corecount: 4
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | event service: False
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | sizes: {0: 2280346, 11: 2280346, 10882: 2309667, 10883: 2318883}
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | --------------------------------------------------
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | 
[2026-03-18 01:21:15] 2026-03-18 00:20:26,548 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot140/slots/0
[2026-03-18 01:21:15] 2026-03-18 00:20:26,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,593 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,593 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,593 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | job 7056958590 has completed (purged errors)
[2026-03-18 01:21:15] 2026-03-18 00:20:26,597 | INFO     | overall cleanup function is called
[2026-03-18 01:21:15] 2026-03-18 00:20:27,603 | INFO     | --- collectZombieJob: --- 10, [3701303]
[2026-03-18 01:21:15] 2026-03-18 00:20:27,604 | INFO     | zombie collector waiting for pid 3701303
[2026-03-18 01:21:15] 2026-03-18 00:20:27,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 01:21:15] 2026-03-18 00:20:27,604 | INFO     | collected zombie processes
[2026-03-18 01:21:15] 2026-03-18 00:20:27,604 | INFO     | will attempt to kill all subprocesses of pid=3701303
[2026-03-18 01:21:15] 2026-03-18 00:20:28,146 | INFO     | process IDs to be killed: [3701303] (in reverse order)
[2026-03-18 01:21:15] 2026-03-18 00:20:28,390 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 01:21:15] 2026-03-18 00:20:28,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 01:21:15] 2026-03-18 00:20:28,422 | INFO     | did not find any defunct processes belonging to 3701303
[2026-03-18 01:21:15] 2026-03-18 00:20:28,453 | INFO     | did not find any defunct processes belonging to 3701303
[2026-03-18 01:21:15] 2026-03-18 00:20:28,453 | INFO     | ready for new job
[2026-03-18 01:21:15] 2026-03-18 00:20:28,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 01:21:15] 2026-03-18 00:20:28,455 | INFO     | **************************************
[2026-03-18 01:21:15] 2026-03-18 00:20:28,455 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 01:21:15] 2026-03-18 00:20:28,455 | INFO     | **************************************
[2026-03-18 01:21:15] 2026-03-18 00:20:28,455 | INFO     | 
[2026-03-18 01:21:15] 2026-03-18 00:20:28,461 | INFO     | architecture information:
[2026-03-18 01:21:15] 2026-03-18 00:20:28,461 | INFO     | executing command: cat /etc/os-release
[2026-03-18 01:21:15] 2026-03-18 00:20:28,483 | INFO     | cat /etc/os-release:
[2026-03-18 01:21:15] NAME="CentOS Linux"
[2026-03-18 01:21:15] VERSION="7 (Core)"
[2026-03-18 01:21:15] ID="centos"
[2026-03-18 01:21:15] ID_LIKE="rhel fedora"
[2026-03-18 01:21:15] VERSION_ID="7"
[2026-03-18 01:21:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 01:21:15] ANSI_COLOR="0;31"
[2026-03-18 01:21:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 01:21:15] HOME_URL="https://www.centos.org/"
[2026-03-18 01:21:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 01:21:15] 
[2026-03-18 01:21:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 01:21:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 01:21:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 01:21:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 01:21:15] 
[2026-03-18 01:21:15] 2026-03-18 00:20:28,483 | INFO     | **************************************
[2026-03-18 01:21:15] 2026-03-18 00:20:28,986 | INFO     | executing command: df -mP /var/lib/boinc/var/slot140/slots/0
[2026-03-18 01:21:15] 2026-03-18 00:20:29,001 | INFO     | sufficient remaining disk space (22619881472 B)
[2026-03-18 01:21:15] 2026-03-18 00:20:29,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 01:21:15] 2026-03-18 00:20:29,001 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 01:21:15] 2026-03-18 00:20:29,001 | INFO     | update_server=False
[2026-03-18 01:21:15] 2026-03-18 00:20:29,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 01:21:15] 2026-03-18 00:20:29,030 | INFO     | all job control threads have been joined
[2026-03-18 01:21:15] 2026-03-18 00:20:29,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 01:21:15] 2026-03-18 00:20:29,351 | INFO     | job.realtimelogging is not enabled
[2026-03-18 01:21:15] 2026-03-18 00:20:29,546 | INFO     | all data control threads have been joined
[2026-03-18 01:21:15] 2026-03-18 00:20:29,826 | INFO     | all payload control threads have been joined
[2026-03-18 01:21:15] 2026-03-18 00:20:30,007 | INFO     | [job] retrieve thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,036 | INFO     | [job] control thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,067 | WARNING  | process 3701303 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 01:21:15] 2026-03-18 00:20:30,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,435 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 01:21:15] 2026-03-18 00:20:30,435 | INFO     | using path: /var/lib/boinc/var/slot140/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 01:21:15] 2026-03-18 00:20:30,436 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-18 01:21:15] 2026-03-18 00:20:30,436 | WARNING  | maxPSS not found in memory monitor output
[2026-03-18 01:21:15] 2026-03-18 00:20:30,436 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7056958590/payload.stdout) since it has not been created yet
[2026-03-18 01:21:15] 2026-03-18 00:20:30,436 | INFO     | executing command: df -mP /var/lib/boinc/var/slot140/slots/0
[2026-03-18 01:21:15] 2026-03-18 00:20:30,466 | INFO     | sufficient remaining disk space (22618832896 B)
[2026-03-18 01:21:15] 2026-03-18 00:20:30,466 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-18 01:21:15] 2026-03-18 00:20:30,466 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot140/slots/0/PanDA_Pilot-7056958590/HITS.49179724._000032.pool.root.1 since it does not exist
[2026-03-18 01:21:15] 2026-03-18 00:20:30,551 | INFO     | [data] control thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,831 | INFO     | [payload] control thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,844 | INFO     | [data] copytool_in thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,853 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,872 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:30,917 | INFO     | [payload] failed_post thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:31,023 | INFO     | number of running child processes to parent process 3701303: 1
[2026-03-18 01:21:15] 2026-03-18 00:20:31,023 | INFO     | maximum number of monitored processes: 6
[2026-03-18 01:21:15] 2026-03-18 00:20:31,023 | INFO     | aborting job monitoring since job object (job id=7056958590) has expired
[2026-03-18 01:21:15] 2026-03-18 00:20:31,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 01:21:15] 2026-03-18 00:20:31,023 | INFO     | will abort loop
[2026-03-18 01:21:15] 2026-03-18 00:20:31,126 | INFO     | [job] validate thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:31,203 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:31,226 | INFO     | [payload] validate_post thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:31,345 | INFO     | [data] copytool_out thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:31,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 01:21:15] 2026-03-18 00:20:32,027 | INFO     | [job] job monitor thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:32,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 01:21:15] 2026-03-18 00:20:32,565 | INFO     | [job] queue monitor thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:36,418 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 01:21:15] 2026-03-18 00:20:59,808 | INFO     | PID=3683526 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 01:21:15] 2026-03-18 00:20:59,811 | INFO     | .. there are 46 such processes running
[2026-03-18 01:21:15] 2026-03-18 00:20:59,811 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 01:21:15] 2026-03-18 00:20:59,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 01:21:15] 2026-03-18 00:20:59,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 01:21:15] 2026-03-18 00:21:09,958 | INFO     | [monitor] cgroup control has ended
[2026-03-18 01:21:15] 2026-03-18 00:21:10,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22826351392576)>', '<ExcThread(monitor, started 22826106226432)>']
[2026-03-18 01:21:15] 2026-03-18 00:21:10,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 01:21:15] 2026-03-18 00:21:10,866 | INFO     | [monitor] control thread has ended
[2026-03-18 01:21:15] 2026-03-18 00:21:15,249 | INFO     | all workflow threads have been joined
[2026-03-18 01:21:15] 2026-03-18 00:21:15,250 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 01:21:15] 2026-03-18 00:21:15,250 | INFO     | traces error code: 0
[2026-03-18 01:21:15] 2026-03-18 00:21:15,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 01:21:15] 2026-03-18 00:21:15,391 [wrapper] ==== pilot stdout END ====
[2026-03-18 01:21:15] 2026-03-18 00:21:15,397 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 01:21:15] 2026-03-18 00:21:15,400 [wrapper] pilotpid: 3683526
[2026-03-18 01:21:15] 2026-03-18 00:21:15,403 [wrapper] Pilot exit status: 0
[2026-03-18 01:21:15] 2026-03-18 00:21:15,445 [wrapper] pandaids: 7056958590
[2026-03-18 01:21:15] 2026-03-18 00:21:15,590 [wrapper] cleanup supervisor_pilot  299231 3683527
[2026-03-18 01:21:15] 2026-03-18 00:21:15,593 [wrapper] Test setup, not cleaning
[2026-03-18 01:21:15] 2026-03-18 00:21:15,596 [wrapper] apfmon messages muted
[2026-03-18 01:21:15] 2026-03-18 00:21:15,598 [wrapper] ==== wrapper stdout END ====
[2026-03-18 01:21:15] 2026-03-18 00:21:15,600 [wrapper] ==== wrapper stderr END ====
[2026-03-18 01:21:15]  *** Error codes and diagnostics ***
[2026-03-18 01:21:15]     "exeErrorCode": 0,
[2026-03-18 01:21:15]     "exeErrorDiag": "",
[2026-03-18 01:21:15]     "pilotErrorCode": 0,
[2026-03-18 01:21:15]     "pilotErrorDiag": "",
[2026-03-18 01:21:15]  *** Listing of results directory ***
[2026-03-18 01:21:15] total 450016
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:23 queuedata.json
[2026-03-18 01:21:15] -rwx------. 1 boinc boinc     36322 Mar 16 16:23 runpilot2-wrapper.sh
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc       100 Mar 17 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 01:21:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 22:17 run_atlas
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc       105 Mar 17 22:17 job.xml
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc      6708 Mar 17 22:18 init_data.xml
[2026-03-18 01:21:15] -rw-r--r--. 2 boinc boinc 231520045 Mar 17 22:18 EVNT.49132113._000002.pool.root.1
[2026-03-18 01:21:15] -rw-r--r--. 2 boinc boinc     15845 Mar 17 22:18 start_atlas.sh
[2026-03-18 01:21:15] drwxrwx--x. 2 boinc boinc      4096 Mar 17 22:18 shared
[2026-03-18 01:21:15] -rw-r--r--. 2 boinc boinc    597551 Mar 17 22:18 input.tar.gz
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc         0 Mar 17 22:18 boinc_lockfile
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc      2641 Mar 17 22:18 pandaJob.out
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc   1011333 Mar 17 22:18 agis_schedconf.cvmfs.json
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc       444 Mar 17 22:18 workernode_map.json
[2026-03-18 01:21:15] drwx------. 5 boinc boinc      4096 Mar 17 22:18 pilot3
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc 221584479 Mar 18 01:19 HITS.49179724._000032.pool.root.1
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc       530 Mar 18 01:19 boinc_task_state.xml
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc      1034 Mar 18 01:20 memory_monitor_summary.json
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc   1511579 Mar 18 01:20 agis_ddmendpoints.agis.ALL.json
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc    348970 Mar 18 01:20 log.49179724._000032.job.log.tgz.1
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc      6354 Mar 18 01:20 heartbeat.json
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc        95 Mar 18 01:20 pilot_heartbeat.json
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc      8192 Mar 18 01:20 boinc_mmap_file
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc        27 Mar 18 01:20 wrapper_checkpoint.txt
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc      6447 Mar 18 01:21 pilotlog.txt
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc   1533062 Mar 18 01:21 log.49179724._000032.job.log.1
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc       357 Mar 18 01:21 output.list
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc       620 Mar 18 01:21 runtime_log
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc   1904640 Mar 18 01:21 result.tar.gz
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc      9222 Mar 18 01:21 runtime_log.err
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc       665 Mar 18 01:21 5KcKDmuxOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmitxLDmMPo8Qo.diag
[2026-03-18 01:21:15] -rw-r--r--. 1 boinc boinc     21295 Mar 18 01:21 stderr.txt
[2026-03-18 01:21:15] HITS file was successfully produced:
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc 221584479 Mar 18 01:19 shared/HITS.pool.root.1
[2026-03-18 01:21:15]  *** Contents of shared directory: ***
[2026-03-18 01:21:15] total 444956
[2026-03-18 01:21:15] -rw-r--r--. 2 boinc boinc 231520045 Mar 17 22:18 ATLAS.root_0
[2026-03-18 01:21:15] -rw-r--r--. 2 boinc boinc     15845 Mar 17 22:18 start_atlas.sh
[2026-03-18 01:21:15] -rw-r--r--. 2 boinc boinc    597551 Mar 17 22:18 input.tar.gz
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc 221584479 Mar 18 01:19 HITS.pool.root.1
[2026-03-18 01:21:15] -rw-------. 1 boinc boinc   1904640 Mar 18 01:21 result.tar.gz
01:21:17 (3670587): run_atlas exited; CPU time 40843.806305
01:21:17 (3670587): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN