Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:28 (9213): wrapper (7.7.26015): starting
00:10:28 (9213): wrapper: running run_atlas (--nthreads 8)
[2026-03-18 00:10:28] Arguments: --nthreads 8
[2026-03-18 00:10:28] Threads: 8
[2026-03-18 00:10:28] Checking for CVMFS
[2026-03-18 00:10:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-18 00:10:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-18 00:10:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-18 00:10:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-18 00:10:32] 2.11.2.0 13854 132536 141620 157392 0 53 24073398 25165825 4526 130560 151 50962583 99.809 38969691 1180 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-18 00:10:32] CVMFS is ok
[2026-03-18 00:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 00:10:32] Checking for apptainer binary...
[2026-03-18 00:10:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-18 00:10:32] Running /usr/bin/apptainer --version
[2026-03-18 00:10:32] apptainer version 1.3.2-1.el7
[2026-03-18 00:10:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 00:10:42] cg-vwn417.simple-grid.lan
[2026-03-18 00:10:42] apptainer works
[2026-03-18 00:10:42] Set ATHENA_PROC_NUMBER=8
[2026-03-18 00:10:42] Set ATHENA_CORE_NUMBER=8
[2026-03-18 00:10:42] Starting ATLAS job with PandaID=7056974968
[2026-03-18 00:10:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 10:47:52]  *** The last 200 lines of the pilot log: ***
[2026-03-18 10:47:52] 2026-03-18 09:47:06,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,621 | INFO     | job 7056974968 has state=finished
[2026-03-18 10:47:52] 2026-03-18 09:47:06,621 | INFO     | preparing for final server update for job 7056974968 in state='finished'
[2026-03-18 10:47:52] 2026-03-18 09:47:06,621 | INFO     | reading metadata from: /var/lib/boinc/slots/6/PanDA_Pilot-7056974968/jobReport.json
[2026-03-18 10:47:52] 2026-03-18 09:47:06,624 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/6/workernode_map.json
[2026-03-18 10:47:52] 2026-03-18 09:47:06,625 | INFO     | this job has now completed (state=finished)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,625 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,625 | INFO     | log transfer has been attempted: DONE
[2026-03-18 10:47:52] 2026-03-18 09:47:06,625 | INFO     | job 7056974968 has finished - writing final server update
[2026-03-18 10:47:52] 2026-03-18 09:47:06,625 | INFO     | total number of processed events: 400 (read)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,627 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7056974968/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,632 | INFO     | extracted standard info from prmon json
[2026-03-18 10:47:52] 2026-03-18 09:47:06,633 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 10:47:52] 2026-03-18 09:47:06,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 10:47:52] 2026-03-18 09:47:06,633 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 10:47:52] 2026-03-18 09:47:06,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 10:47:52] 2026-03-18 09:47:06,644 | INFO     | fitting pss+swap vs Time
[2026-03-18 10:47:52] 2026-03-18 09:47:06,646 | INFO     | sum of square deviations: 72833767468.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,667 | INFO     | sum of deviations: 106962198442.99997
[2026-03-18 10:47:52] 2026-03-18 09:47:06,667 | INFO     | mean x: 1773808368.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,667 | INFO     | mean y: 2522112.8638573745
[2026-03-18 10:47:52] 2026-03-18 09:47:06,667 | INFO     | intersect: -2602456995.7787
[2026-03-18 10:47:52] 2026-03-18 09:47:06,668 | INFO     | chi2: 4.997818231510826
[2026-03-18 10:47:52] 2026-03-18 09:47:06,669 | INFO     | sum of square deviations: 71077399653.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,680 | INFO     | sum of deviations: 147256409957.5
[2026-03-18 10:47:52] 2026-03-18 09:47:06,681 | INFO     | mean x: 1773808215.5
[2026-03-18 10:47:52] 2026-03-18 09:47:06,681 | INFO     | mean y: 2525587.7336601308
[2026-03-18 10:47:52] 2026-03-18 09:47:06,681 | INFO     | intersect: -3672406683.886447
[2026-03-18 10:47:52] 2026-03-18 09:47:06,682 | INFO     | chi2: 4.236630751525931
[2026-03-18 10:47:52] 2026-03-18 09:47:06,682 | INFO     | current chi2=4.236630751525931 (change=15.230395439067223 %)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,682 | INFO     | right removable region: 611
[2026-03-18 10:47:52] 2026-03-18 09:47:06,683 | INFO     | sum of square deviations: 71077399653.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,708 | INFO     | sum of deviations: -92187872172.99997
[2026-03-18 10:47:52] 2026-03-18 09:47:06,708 | INFO     | mean x: 1773808520.5
[2026-03-18 10:47:52] 2026-03-18 09:47:06,708 | INFO     | mean y: 2539391.888888889
[2026-03-18 10:47:52] 2026-03-18 09:47:06,708 | INFO     | intersect: 2303181142.2280245
[2026-03-18 10:47:52] 2026-03-18 09:47:06,709 | INFO     | chi2: 1.2757114989959641
[2026-03-18 10:47:52] 2026-03-18 09:47:06,709 | INFO     | current chi2=1.2757114989959641 (change=74.47463193133537 %)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,710 | INFO     | sum of square deviations: 69349497488.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,726 | INFO     | sum of deviations: -126902338016.99995
[2026-03-18 10:47:52] 2026-03-18 09:47:06,726 | INFO     | mean x: 1773808673.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,726 | INFO     | mean y: 2542446.334431631
[2026-03-18 10:47:52] 2026-03-18 09:47:06,726 | INFO     | intersect: 3248427073.508302
[2026-03-18 10:47:52] 2026-03-18 09:47:06,727 | INFO     | chi2: 1.102342564012191
[2026-03-18 10:47:52] 2026-03-18 09:47:06,727 | INFO     | current chi2=1.102342564012191 (change=13.58997979717368 %)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,727 | INFO     | left removable region: 20
[2026-03-18 10:47:52] 2026-03-18 09:47:06,728 | INFO     | sum of square deviations: 64008790840.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,747 | INFO     | sum of deviations: -86975226423.99998
[2026-03-18 10:47:52] 2026-03-18 09:47:06,747 | INFO     | mean x: 1773808795.0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,747 | INFO     | mean y: 2546273.7411167515
[2026-03-18 10:47:52] 2026-03-18 09:47:06,747 | INFO     | intersect: 2412799920.9885416
[2026-03-18 10:47:52] 2026-03-18 09:47:06,748 | INFO     | chi2: 0.2870397731034658
[2026-03-18 10:47:52] 2026-03-18 09:47:06,749 | INFO     | current memory leak: -1.36 B/s (using 591 data points, chi2=0.29)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,749 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | ..............................
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . Timing measurements:
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . get job = 0 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . initial setup = 93 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . payload setup = 126 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . stage-in = 0 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . payload execution = 37739 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . stage-out = 4 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | . log creation = 1 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,750 | INFO     | ..............................
[2026-03-18 10:47:52] 2026-03-18 09:47:06,870 | INFO     | 
[2026-03-18 10:47:52] 2026-03-18 09:47:06,870 | INFO     | job summary report
[2026-03-18 10:47:52] 2026-03-18 09:47:06,870 | INFO     | --------------------------------------------------
[2026-03-18 10:47:52] 2026-03-18 09:47:06,870 | INFO     | PanDA job id: 7056974968
[2026-03-18 10:47:52] 2026-03-18 09:47:06,870 | INFO     | task id: 49181388
[2026-03-18 10:47:52] 2026-03-18 09:47:06,870 | INFO     | errors: (none)
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | pilot state: finished 
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | transexitcode: 0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | exeerrorcode: 0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | exeerrordiag: 
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | exitcode: 0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | exitmsg: OK
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | cpuconsumptiontime: 147998 s
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | nevents: 400
[2026-03-18 10:47:52] 2026-03-18 09:47:06,871 | INFO     | neventsw: 0
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | pid: 17820
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | pgrp: 17820
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | corecount: 8
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | event service: False
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | sizes: {0: 2279207, 1: 2279892, 2: 2280353, 13: 2280353, 37869: 2321319, 37870: 2321318, 37874: 2330556, 37877: 2330694}
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | --------------------------------------------------
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | 
[2026-03-18 10:47:52] 2026-03-18 09:47:06,872 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-18 10:47:52] 2026-03-18 09:47:07,301 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,302 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,302 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,302 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,304 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 10:47:52] 2026-03-18 09:47:07,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,304 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 10:47:52] 2026-03-18 09:47:07,304 | INFO     | job 7056974968 has completed (purged errors)
[2026-03-18 10:47:52] 2026-03-18 09:47:07,304 | INFO     | overall cleanup function is called
[2026-03-18 10:47:52] 2026-03-18 09:47:08,314 | INFO     | --- collectZombieJob: --- 10, [17820]
[2026-03-18 10:47:52] 2026-03-18 09:47:08,314 | INFO     | zombie collector waiting for pid 17820
[2026-03-18 10:47:52] 2026-03-18 09:47:08,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 10:47:52] 2026-03-18 09:47:08,314 | INFO     | collected zombie processes
[2026-03-18 10:47:52] 2026-03-18 09:47:08,314 | INFO     | will attempt to kill all subprocesses of pid=17820
[2026-03-18 10:47:52] 2026-03-18 09:47:08,471 | INFO     | process IDs to be killed: [17820] (in reverse order)
[2026-03-18 10:47:52] 2026-03-18 09:47:09,440 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 10:47:52] 2026-03-18 09:47:09,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 10:47:52] 2026-03-18 09:47:09,444 | INFO     | did not find any defunct processes belonging to 17820
[2026-03-18 10:47:52] 2026-03-18 09:47:09,447 | INFO     | did not find any defunct processes belonging to 17820
[2026-03-18 10:47:52] 2026-03-18 09:47:09,447 | INFO     | ready for new job
[2026-03-18 10:47:52] 2026-03-18 09:47:09,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 10:47:52] 2026-03-18 09:47:09,451 | INFO     | **************************************
[2026-03-18 10:47:52] 2026-03-18 09:47:09,451 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 10:47:52] 2026-03-18 09:47:09,451 | INFO     | **************************************
[2026-03-18 10:47:52] 2026-03-18 09:47:09,451 | INFO     | 
[2026-03-18 10:47:52] 2026-03-18 09:47:09,452 | INFO     | pilot is running in a VM
[2026-03-18 10:47:52] 2026-03-18 09:47:09,452 | INFO     | architecture information:
[2026-03-18 10:47:52] 2026-03-18 09:47:09,457 | INFO     | executing command: cat /etc/os-release
[2026-03-18 10:47:52] 2026-03-18 09:47:09,660 | INFO     | cat /etc/os-release:
[2026-03-18 10:47:52] NAME="CentOS Linux"
[2026-03-18 10:47:52] VERSION="7 (Core)"
[2026-03-18 10:47:52] ID="centos"
[2026-03-18 10:47:52] ID_LIKE="rhel fedora"
[2026-03-18 10:47:52] VERSION_ID="7"
[2026-03-18 10:47:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 10:47:52] ANSI_COLOR="0;31"
[2026-03-18 10:47:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 10:47:52] HOME_URL="https://www.centos.org/"
[2026-03-18 10:47:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 10:47:52] 
[2026-03-18 10:47:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 10:47:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 10:47:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 10:47:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 10:47:52] 
[2026-03-18 10:47:52] 2026-03-18 09:47:09,661 | INFO     | **************************************
[2026-03-18 10:47:52] 2026-03-18 09:47:10,164 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-18 10:47:52] 2026-03-18 09:47:10,422 | INFO     | sufficient remaining disk space (495653486592 B)
[2026-03-18 10:47:52] 2026-03-18 09:47:10,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 10:47:52] 2026-03-18 09:47:10,423 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 10:47:52] 2026-03-18 09:47:10,423 | INFO     | update_server=False
[2026-03-18 10:47:52] 2026-03-18 09:47:10,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 10:47:52] 2026-03-18 09:47:10,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:47:52] 2026-03-18 09:47:10,424 | INFO     | aborting loop
[2026-03-18 10:47:52] 2026-03-18 09:47:10,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 10:47:52] 2026-03-18 09:47:10,997 | INFO     | all job control threads have been joined
[2026-03-18 10:47:52] 2026-03-18 09:47:11,429 | INFO     | [job] retrieve thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:11,430 | INFO     | [job] job monitor thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:11,436 | INFO     | [payload] validate_post thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:11,446 | INFO     | all data control threads have been joined
[2026-03-18 10:47:52] 2026-03-18 09:47:11,589 | INFO     | all payload control threads have been joined
[2026-03-18 10:47:52] 2026-03-18 09:47:11,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 10:47:52] 2026-03-18 09:47:11,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 10:47:52] 2026-03-18 09:47:11,938 | INFO     | [job] validate thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,003 | INFO     | [job] control thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,053 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,147 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,180 | INFO     | [data] copytool_in thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,367 | INFO     | [payload] failed_post thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,452 | INFO     | [data] control thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,595 | INFO     | [payload] control thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,642 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:12,888 | INFO     | [job] queue monitor thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:13,717 | INFO     | [data] copytool_out thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:14,439 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 10:47:52] 2026-03-18 09:47:38,922 | INFO     | PID=13311 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 10:47:52] 2026-03-18 09:47:38,922 | INFO     | .. there are 9 such processes running
[2026-03-18 10:47:52] 2026-03-18 09:47:38,924 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 10:47:52] 2026-03-18 09:47:38,924 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 10:47:52] 2026-03-18 09:47:38,924 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 10:47:52] 2026-03-18 09:47:41,603 | INFO     | [monitor] cgroup control has ended
[2026-03-18 10:47:52] 2026-03-18 09:47:42,957 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008305301312)>', '<ExcThread(monitor, started 140007704602368)>']
[2026-03-18 10:47:52] 2026-03-18 09:47:43,954 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 10:47:52] 2026-03-18 09:47:43,954 | INFO     | [monitor] control thread has ended
[2026-03-18 10:47:52] 2026-03-18 09:47:47,982 | INFO     | all workflow threads have been joined
[2026-03-18 10:47:52] 2026-03-18 09:47:47,982 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 10:47:52] 2026-03-18 09:47:47,982 | INFO     | traces error code: 0
[2026-03-18 10:47:52] 2026-03-18 09:47:47,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 10:47:52] 2026-03-18 09:47:48,262 [wrapper] ==== pilot stdout END ====
[2026-03-18 10:47:52] 2026-03-18 09:47:48,352 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 10:47:52] 2026-03-18 09:47:48,449 [wrapper] pilotpid: 13311
[2026-03-18 10:47:52] 2026-03-18 09:47:48,550 [wrapper] Pilot exit status: 0
[2026-03-18 10:47:52] 2026-03-18 09:47:48,997 [wrapper] pandaids: 7056974968
[2026-03-18 10:47:52] 2026-03-18 09:47:49,690 [wrapper] cleanup supervisor_pilot  2266 13312
[2026-03-18 10:47:52] 2026-03-18 09:47:49,722 [wrapper] Test setup, not cleaning
[2026-03-18 10:47:52] 2026-03-18 09:47:49,748 [wrapper] apfmon messages muted
[2026-03-18 10:47:52] 2026-03-18 09:47:49,772 [wrapper] ==== wrapper stdout END ====
[2026-03-18 10:47:52] 2026-03-18 09:47:49,843 [wrapper] ==== wrapper stderr END ====
[2026-03-18 10:47:52]  *** Error codes and diagnostics ***
[2026-03-18 10:47:52]     "exeErrorCode": 0,
[2026-03-18 10:47:52]     "exeErrorDiag": "",
[2026-03-18 10:47:52]     "pilotErrorCode": 0,
[2026-03-18 10:47:52]     "pilotErrorDiag": "",
[2026-03-18 10:47:52]  *** Listing of results directory ***
[2026-03-18 10:47:52] total 491552
[2026-03-18 10:47:52] -rwx------. 1 boinc boinc     36322 Mar 16 17:43 runpilot2-wrapper.sh
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc    585013 Mar 16 17:45 pilot3.tar.gz
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc      5111 Mar 16 17:45 queuedata.json
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc       100 Mar 18 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 10:47:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 00:10 run_atlas
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc       105 Mar 18 00:10 job.xml
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc      6390 Mar 18 00:10 init_data.xml
[2026-03-18 10:47:52] -rw-r--r--. 2 boinc boinc 240580443 Mar 18 00:10 EVNT.49134998._000002.pool.root.1
[2026-03-18 10:47:52] -rw-r--r--. 2 boinc boinc     15845 Mar 18 00:10 start_atlas.sh
[2026-03-18 10:47:52] drwxrwx--x. 2 boinc boinc        68 Mar 18 00:10 shared
[2026-03-18 10:47:52] -rw-r--r--. 2 boinc boinc    597532 Mar 18 00:10 input.tar.gz
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc         0 Mar 18 00:10 boinc_lockfile
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc      2610 Mar 18 00:10 pandaJob.out
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc       415 Mar 18 00:15 workernode_map.json
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc   1011391 Mar 18 00:15 agis_schedconf.cvmfs.json
[2026-03-18 10:47:52] drwx------. 5 boinc boinc      4096 Mar 18 00:15 pilot3
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc 246855576 Mar 18 10:45 HITS.49181388._000041.pool.root.1
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc       531 Mar 18 10:45 boinc_task_state.xml
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc      1030 Mar 18 10:46 memory_monitor_summary.json
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc   1511579 Mar 18 10:46 agis_ddmendpoints.agis.ALL.json
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc    787810 Mar 18 10:47 log.49181388._000041.job.log.tgz.1
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc      6313 Mar 18 10:47 heartbeat.json
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc        29 Mar 18 10:47 wrapper_checkpoint.txt
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc      8192 Mar 18 10:47 boinc_mmap_file
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc        95 Mar 18 10:47 pilot_heartbeat.json
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc      4880 Mar 18 10:47 pilotlog.txt
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc   5204450 Mar 18 10:47 log.49181388._000041.job.log.1
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc       357 Mar 18 10:47 output.list
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc       620 Mar 18 10:47 runtime_log
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc   6010880 Mar 18 10:47 result.tar.gz
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc      8816 Mar 18 10:47 runtime_log.err
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc       658 Mar 18 10:47 2tILDmJDQM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm6TvLDmqsVP8n.diag
[2026-03-18 10:47:52] -rw-r--r--. 1 boinc boinc     20945 Mar 18 10:47 stderr.txt
[2026-03-18 10:47:52] HITS file was successfully produced:
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc 246855576 Mar 18 10:45 shared/HITS.pool.root.1
[2026-03-18 10:47:52]  *** Contents of shared directory: ***
[2026-03-18 10:47:52] total 482488
[2026-03-18 10:47:52] -rw-r--r--. 2 boinc boinc 240580443 Mar 18 00:10 ATLAS.root_0
[2026-03-18 10:47:52] -rw-r--r--. 2 boinc boinc     15845 Mar 18 00:10 start_atlas.sh
[2026-03-18 10:47:52] -rw-r--r--. 2 boinc boinc    597532 Mar 18 00:10 input.tar.gz
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc 246855576 Mar 18 10:45 HITS.pool.root.1
[2026-03-18 10:47:52] -rw-------. 1 boinc boinc   6010880 Mar 18 10:47 result.tar.gz
10:47:53 (9213): run_atlas exited; CPU time 148613.126675
10:47:53 (9213): called boinc_finish(0)

</stderr_txt>
]]>

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