Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:09:55 (520535): wrapper (7.7.26015): starting
13:09:55 (520535): wrapper: running run_atlas (--nthreads 12)
[2026-03-16 13:09:55] Arguments: --nthreads 12
[2026-03-16 13:09:55] Threads: 12
[2026-03-16 13:09:55] Checking for CVMFS
[2026-03-16 13:09:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-16 13:09:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-16 13:09:56] Running cvmfs_config stat atlas.cern.ch
[2026-03-16 13:09:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-16 13:09:56] 2.11.5.0 704438 152056 285184 157351 2 915 42415074 45568001 23549 130560 0 1356878796 99.820 752132676 18956 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-16 13:09:56] CVMFS is ok
[2026-03-16 13:09:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-16 13:09:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-16 13:09:56] Further information can be found at the LHC@home message board.
[2026-03-16 13:09:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-16 13:09:56] Checking for apptainer binary...
[2026-03-16 13:09:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-16 13:09:56] Running /usr/bin/apptainer --version
[2026-03-16 13:09:56] apptainer version 1.4.1-1.el9
[2026-03-16 13:09:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-16 13:09:57] wns0084.triumf.lcg
[2026-03-16 13:09:57] apptainer works
[2026-03-16 13:09:57] Set ATHENA_PROC_NUMBER=12
[2026-03-16 13:09:57] Set ATHENA_CORE_NUMBER=12
[2026-03-16 13:09:57] Starting ATLAS job with PandaID=7056973713
[2026-03-16 13:09:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-16 13:14:49]  *** The last 200 lines of the pilot log: ***
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | wrong length of table data, x=[1773691889.0], y=[2341.0] (must be same and length>=4)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | ..............................
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . Timing measurements:
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . get job = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . initial setup = 18 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . payload setup = 17 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . stage-in = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . payload execution = 41 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . stage-out = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . log creation = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | ..............................
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056973713/pilotlog.txt
[2026-03-16 13:14:49] 2026-03-16 20:13:57,433 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-16 13:14:49] - Log from pilotlog.txt -
[2026-03-16 13:14:49] 2026-03-16 20:13:57,414 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7056973713/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,414 | INFO     | extracted standard info from prmon json
[2026-03-16 13:14:49] 2026-03-16 20:13:57,414 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | wrong length of table data, x=[1773691889.0], y=[2341.0] (must be same and length>=4)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | ..............................
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . Timing measurements:
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . get job = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . initial setup = 18 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . payload setup = 17 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . stage-in = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . payload execution = 41 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . stage-out = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . log creation = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | ..............................
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056973713/pilotlog.txt
[2026-03-16 13:14:49] 2026-03-16 20:13:57,434 | WARNING  | 
[2026-03-16 13:14:49] [begin log extracts]
[2026-03-16 13:14:49] - Log from pilotlog.txt -
[2026-03-16 13:14:49] 2026-03-16 20:13:57,414 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7056973713/memory_monitor_summary.json (trf name=prmon)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,414 | INFO     | extracted standard info from prmon json
[2026-03-16 13:14:49] 2026-03-16 20:13:57,414 | INFO     | extracted standard memory fields from prmon json
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-16 13:14:49] 2026-03-16 20:13:57,415 | WARNING  | wrong length of table data, x=[1773691889.0], y=[2341.0] (must be same and length>=4)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | could have reported an average CPU frequency of 2662 MHz (4 samples)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | ..............................
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . Timing measurements:
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . get job = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . initial setup = 18 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . payload setup = 17 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . stage-in = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . payload execution = 41 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . stage-out = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | . log creation = 0 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | ..............................
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-16 13:14:49] 2026-03-16 20:13:57,416 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7056973713/pilotlog.txt
[2026-03-16 13:14:49] [end log extracts]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,434 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,435 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-16 13:14:49] 2026-03-16 20:13:57,502 | INFO     | 
[2026-03-16 13:14:49] 2026-03-16 20:13:57,503 | INFO     | job summary report
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | --------------------------------------------------
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | PanDA job id: 7056973713
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | task id: 49181063
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-16 13:11:47,549 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | pilot state: failed 
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | transexitcode: 65
[2026-03-16 13:14:49] 2026-03-16 20:13:57,507 | INFO     | exeerrorcode: 65
[2026-03-16 13:14:49] 2026-03-16 20:13:57,508 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | exitcode: 65
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | cpuconsumptiontime: 13 s
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | nevents: 0
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | neventsw: 0
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | pid: 530755
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | pgrp: 530755
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | corecount: 12
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | event service: False
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | sizes: {0: 2279865, 1: 2280326, 11: 2280326, 63: 2303645, 64: 2303621, 65: 2307969, 68: 2308125, 184: 2308291}
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | --------------------------------------------------
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | 
[2026-03-16 13:14:49] 2026-03-16 20:13:57,509 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-16 13:14:49] 2026-03-16 20:13:57,619 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,621 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-16 13:14:49] 2026-03-16 20:13:57,621 | INFO     | job 7056973713 has completed (purged errors)
[2026-03-16 13:14:49] 2026-03-16 20:13:57,621 | INFO     | overall cleanup function is called
[2026-03-16 13:14:49] 2026-03-16 20:13:58,628 | INFO     | --- collectZombieJob: --- 10, [530755]
[2026-03-16 13:14:49] 2026-03-16 20:13:58,628 | INFO     | zombie collector waiting for pid 530755
[2026-03-16 13:14:49] 2026-03-16 20:13:58,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-16 13:14:49] 2026-03-16 20:13:58,628 | INFO     | collected zombie processes
[2026-03-16 13:14:49] 2026-03-16 20:13:58,628 | INFO     | will attempt to kill all subprocesses of pid=530755
[2026-03-16 13:14:49] 2026-03-16 20:13:59,416 | INFO     | process IDs to be killed: [530755] (in reverse order)
[2026-03-16 13:14:49] 2026-03-16 20:13:59,900 | WARNING  | found no corresponding commands to process id(s)
[2026-03-16 13:14:49] 2026-03-16 20:13:59,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-16 13:14:49] 2026-03-16 20:13:59,940 | INFO     | did not find any defunct processes belonging to 530755
[2026-03-16 13:14:49] 2026-03-16 20:13:59,987 | INFO     | did not find any defunct processes belonging to 530755
[2026-03-16 13:14:49] 2026-03-16 20:13:59,988 | INFO     | ready for new job
[2026-03-16 13:14:49] 2026-03-16 20:13:59,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-16 13:14:49] 2026-03-16 20:14:00,011 | INFO     | **************************************
[2026-03-16 13:14:49] 2026-03-16 20:14:00,011 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-16 13:14:49] 2026-03-16 20:14:00,011 | INFO     | **************************************
[2026-03-16 13:14:49] 2026-03-16 20:14:00,011 | INFO     | 
[2026-03-16 13:14:49] 2026-03-16 20:14:00,013 | INFO     | architecture information:
[2026-03-16 13:14:49] 2026-03-16 20:14:00,035 | INFO     | executing command: cat /etc/os-release
[2026-03-16 13:14:49] 2026-03-16 20:14:00,136 | INFO     | cat /etc/os-release:
[2026-03-16 13:14:49] NAME="CentOS Linux"
[2026-03-16 13:14:49] VERSION="7 (Core)"
[2026-03-16 13:14:49] ID="centos"
[2026-03-16 13:14:49] ID_LIKE="rhel fedora"
[2026-03-16 13:14:49] VERSION_ID="7"
[2026-03-16 13:14:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-16 13:14:49] ANSI_COLOR="0;31"
[2026-03-16 13:14:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-16 13:14:49] HOME_URL="https://www.centos.org/"
[2026-03-16 13:14:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-16 13:14:49] 
[2026-03-16 13:14:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-16 13:14:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-16 13:14:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-16 13:14:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-16 13:14:49] 
[2026-03-16 13:14:49] 2026-03-16 20:14:00,136 | INFO     | **************************************
[2026-03-16 13:14:49] 2026-03-16 20:14:00,640 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-16 13:14:49] 2026-03-16 20:14:00,678 | INFO     | sufficient remaining disk space (1838372880384 B)
[2026-03-16 13:14:49] 2026-03-16 20:14:00,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-16 13:14:49] 2026-03-16 20:14:00,679 | INFO     | current server update state: UPDATING_FINAL
[2026-03-16 13:14:49] 2026-03-16 20:14:00,679 | INFO     | update_server=False
[2026-03-16 13:14:49] 2026-03-16 20:14:00,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-16 13:14:49] 2026-03-16 20:14:00,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-16 13:14:49] 2026-03-16 20:14:00,780 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-16 13:14:49] 2026-03-16 20:14:00,780 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-16 13:14:49] 2026-03-16 20:14:00,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-16 13:14:49] 2026-03-16 20:14:00,780 | INFO     | will abort loop
[2026-03-16 13:14:49] 2026-03-16 20:14:00,882 | INFO     | all data control threads have been joined
[2026-03-16 13:14:49] 2026-03-16 20:14:01,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-16 13:14:49] 2026-03-16 20:14:01,685 | INFO     | [job] retrieve thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:01,769 | INFO     | all payload control threads have been joined
[2026-03-16 13:14:49] 2026-03-16 20:14:01,786 | INFO     | [job] job monitor thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:01,888 | INFO     | [data] control thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,185 | INFO     | all job control threads have been joined
[2026-03-16 13:14:49] 2026-03-16 20:14:02,323 | INFO     | [job] validate thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-16 13:14:49] 2026-03-16 20:14:02,560 | INFO     | [payload] validate_post thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,570 | INFO     | [payload] execute_payloads thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,577 | INFO     | [job] create_data_payload thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,714 | INFO     | [payload] validate_pre thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,762 | INFO     | [data] copytool_in thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:02,781 | INFO     | [payload] control thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:03,182 | INFO     | [payload] failed_post thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:03,190 | INFO     | [job] control thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:03,413 | INFO     | [data] copytool_out thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:03,524 | INFO     | [job] queue monitor thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:04,692 | INFO     | [data] queue_monitor thread has finished
[2026-03-16 13:14:49] 2026-03-16 20:14:29,830 | INFO     | PID=524371 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-16 13:14:49] 2026-03-16 20:14:29,830 | INFO     | .. there are 35 such processes running
[2026-03-16 13:14:49] 2026-03-16 20:14:29,831 | INFO     | found 0 job(s) in 20 queues
[2026-03-16 13:14:49] 2026-03-16 20:14:29,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-16 13:14:49] 2026-03-16 20:14:29,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-16 13:14:49] 2026-03-16 20:14:41,943 | INFO     | [monitor] cgroup control has ended
[2026-03-16 13:14:49] 2026-03-16 20:14:42,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083492271936)>', '<ExcThread(monitor, started 140082421946112)>']
[2026-03-16 13:14:49] 2026-03-16 20:14:42,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-16 13:14:49] 2026-03-16 20:14:42,922 | INFO     | [monitor] control thread has ended
[2026-03-16 13:14:49] 2026-03-16 20:14:47,899 | INFO     | all workflow threads have been joined
[2026-03-16 13:14:49] 2026-03-16 20:14:47,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-16 13:14:49] 2026-03-16 20:14:47,899 | INFO     | traces error code: 0
[2026-03-16 13:14:49] 2026-03-16 20:14:47,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-16 13:14:49] 2026-03-16 20:14:48,404 [wrapper] ==== pilot stdout END ====
[2026-03-16 13:14:49] 2026-03-16 20:14:48,450 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-16 13:14:49] 2026-03-16 20:14:48,474 [wrapper] pilotpid: 524371
[2026-03-16 13:14:49] 2026-03-16 20:14:48,499 [wrapper] Pilot exit status: 0
[2026-03-16 13:14:49] 2026-03-16 20:14:48,612 [wrapper] pandaids: 7056973713
[2026-03-16 13:14:49] 2026-03-16 20:14:48,953 [wrapper] cleanup supervisor_pilot  524377 524372
[2026-03-16 13:14:49] 2026-03-16 20:14:48,970 [wrapper] Test setup, not cleaning
[2026-03-16 13:14:49] 2026-03-16 20:14:48,986 [wrapper] apfmon messages muted
[2026-03-16 13:14:49] 2026-03-16 20:14:49,005 [wrapper] ==== wrapper stdout END ====
[2026-03-16 13:14:49] 2026-03-16 20:14:49,031 [wrapper] ==== wrapper stderr END ====
[2026-03-16 13:14:49]  *** Error codes and diagnostics ***
[2026-03-16 13:14:49]     "exeErrorCode": 65,
[2026-03-16 13:14:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 13:14:49]     "pilotErrorCode": 1305,
[2026-03-16 13:14:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-16 13:14:49]  *** Listing of results directory ***
[2026-03-16 13:14:49] total 238528
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc    585013 Mar 16 09:03 pilot3.tar.gz
[2026-03-16 13:14:49] -rwx------. 1 boinc boinc     36322 Mar 16 09:41 runpilot2-wrapper.sh
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc      5111 Mar 16 09:43 queuedata.json
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc       100 Mar 16 13:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-16 13:14:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar 16 13:09 run_atlas
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc       105 Mar 16 13:09 job.xml
[2026-03-16 13:14:49] -rw-r--r--. 2 boinc boinc 240108194 Mar 16 13:09 EVNT.49134387._000010.pool.root.1
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc      6594 Mar 16 13:09 init_data.xml
[2026-03-16 13:14:49] -rw-r--r--. 2 boinc boinc     15845 Mar 16 13:09 start_atlas.sh
[2026-03-16 13:14:49] drwxrwx--x. 2 boinc boinc      4096 Mar 16 13:09 shared
[2026-03-16 13:14:49] -rw-r--r--. 2 boinc boinc    597538 Mar 16 13:09 input.tar.gz
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc         0 Mar 16 13:09 boinc_lockfile
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc      2613 Mar 16 13:09 pandaJob.out
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc   1006429 Mar 16 13:10 agis_schedconf.cvmfs.json
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc   1511579 Mar 16 13:10 agis_ddmendpoints.agis.ALL.json
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc       445 Mar 16 13:10 workernode_map.json
[2026-03-16 13:14:49] drwx------. 5 boinc boinc      4096 Mar 16 13:10 pilot3
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc       947 Mar 16 13:11 memory_monitor_summary.json
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc     21540 Mar 16 13:11 log.49181063._000227.job.log.tgz.1
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc      7043 Mar 16 13:13 heartbeat.json
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc        95 Mar 16 13:14 pilot_heartbeat.json
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc       523 Mar 16 13:14 boinc_task_state.xml
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc      8192 Mar 16 13:14 boinc_mmap_file
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc        22 Mar 16 13:14 wrapper_checkpoint.txt
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc      5004 Mar 16 13:14 pilotlog.txt
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc     85623 Mar 16 13:14 log.49181063._000227.job.log.1
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc       188 Mar 16 13:14 output.list
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc       620 Mar 16 13:14 runtime_log
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc    122880 Mar 16 13:14 result.tar.gz
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc      8635 Mar 16 13:14 runtime_log.err
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc       644 Mar 16 13:14 gSbNDmIBQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5WyLDmZjgfrm.diag
[2026-03-16 13:14:49] -rw-r--r--. 1 boinc boinc     21811 Mar 16 13:14 stderr.txt
[2026-03-16 13:14:49] No HITS result produced
[2026-03-16 13:14:49]  *** Contents of shared directory: ***
[2026-03-16 13:14:49] total 235208
[2026-03-16 13:14:49] -rw-r--r--. 2 boinc boinc 240108194 Mar 16 13:09 ATLAS.root_0
[2026-03-16 13:14:49] -rw-r--r--. 2 boinc boinc     15845 Mar 16 13:09 start_atlas.sh
[2026-03-16 13:14:49] -rw-r--r--. 2 boinc boinc    597538 Mar 16 13:09 input.tar.gz
[2026-03-16 13:14:49] -rw-------. 1 boinc boinc    122880 Mar 16 13:14 result.tar.gz
13:14:51 (520535): run_atlas exited; CPU time 20.408019
13:14:51 (520535): called boinc_finish(0)

</stderr_txt>
]]>

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