Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:27:44 (3781312): wrapper (7.7.26015): starting
14:27:44 (3781312): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 14:27:44] Arguments: --nthreads 4
[2026-03-18 14:27:44] Threads: 4
[2026-03-18 14:27:44] Checking for CVMFS
[2026-03-18 14:27:44] No cvmfs_config command found, will try listing directly
[2026-03-18 14:27:44] CVMFS is ok
[2026-03-18 14:27:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 14:27:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 14:27:44] Further information can be found at the LHC@home message board.
[2026-03-18 14:27:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 14:27:44] Checking for apptainer binary...
[2026-03-18 14:27:44] which: no apptainer in ((null))
[2026-03-18 14:27:44] apptainer is not installed, using version from CVMFS
[2026-03-18 14:27:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 14:27:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-18 14:27:44] apptainer works
[2026-03-18 14:27:44] Set ATHENA_PROC_NUMBER=4
[2026-03-18 14:27:44] Set ATHENA_CORE_NUMBER=4
[2026-03-18 14:27:44] Starting ATLAS job with PandaID=7056951610
[2026-03-18 14:27:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 17:52:38]  *** The last 200 lines of the pilot log: ***
[2026-03-18 17:52:38] 2026-03-18 16:50:06,351 | INFO     | intersect: 141443516.06777447
[2026-03-18 17:52:38] 2026-03-18 16:50:06,352 | INFO     | chi2: 1.8501871660770077
[2026-03-18 17:52:38] 2026-03-18 16:50:06,352 | INFO     | sum of square deviations: 2263977332.5
[2026-03-18 17:52:38] 2026-03-18 16:50:06,352 | INFO     | sum of deviations: 12261187453.000002
[2026-03-18 17:52:38] 2026-03-18 16:50:06,352 | INFO     | mean x: 1773846388.5
[2026-03-18 17:52:38] 2026-03-18 16:50:06,352 | INFO     | mean y: 2347287.597938144
[2026-03-18 17:52:38] 2026-03-18 16:50:06,352 | INFO     | intersect: -9604402201.45666
[2026-03-18 17:52:38] 2026-03-18 16:50:06,353 | INFO     | chi2: 1.045405332172224
[2026-03-18 17:52:38] 2026-03-18 16:50:06,353 | INFO     | current chi2=1.045405332172224 (change=43.497320090657645 %)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,353 | INFO     | sum of square deviations: 2093397390.0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,353 | INFO     | sum of deviations: 11894760209.000002
[2026-03-18 17:52:38] 2026-03-18 16:50:06,353 | INFO     | mean x: 1773846236.0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,353 | INFO     | mean y: 2346959.9365079366
[2026-03-18 17:52:38] 2026-03-18 16:50:06,353 | INFO     | intersect: -10076711954.366058
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | chi2: 1.045951469385718
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | current chi2=1.045951469385718 (change=-0.052241670927680235 %)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | right removable region: 188
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | sum of square deviations: 2263977332.5
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | sum of deviations: -14840093694.5
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | mean x: 1773846693.5
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | mean y: 2349107.0463917525
[2026-03-18 17:52:38] 2026-03-18 16:50:06,354 | INFO     | intersect: 11629696586.7805
[2026-03-18 17:52:38] 2026-03-18 16:50:06,355 | INFO     | chi2: 0.8235997122479483
[2026-03-18 17:52:38] 2026-03-18 16:50:06,355 | INFO     | current chi2=0.8235997122479483 (change=55.48560019502001 %)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,355 | INFO     | sum of square deviations: 2093397390.0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,355 | INFO     | sum of deviations: -13953776901.0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,355 | INFO     | mean x: 1773846846.0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,355 | INFO     | mean y: 2348318.566137566
[2026-03-18 17:52:38] 2026-03-18 16:50:06,355 | INFO     | intersect: 11826124952.598581
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | chi2: 0.8236809606595623
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | current chi2=0.8236809606595623 (change=-0.009865036425558416 %)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | left removable region: 20
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | sum of square deviations: 1470248962.0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | sum of deviations: -942665207.9999999
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | mean x: 1773846815.5
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | mean y: 2358621.3214285714
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | intersect: 1139678708.2669787
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | chi2: 0.0009304828462894491
[2026-03-18 17:52:38] 2026-03-18 16:50:06,356 | INFO     | current memory leak: -0.64 B/s (using 168 data points, chi2=0.00)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | could have reported an average CPU frequency of 3573 MHz (10 samples)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | ..............................
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . Timing measurements:
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . get job = 0 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . initial setup = 5 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . payload setup = 7 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . stage-in = 0 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . payload execution = 12102 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . stage-out = 0 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | . log creation = 0 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,357 | INFO     | ..............................
[2026-03-18 17:52:38] 2026-03-18 16:50:06,403 | INFO     | 
[2026-03-18 17:52:38] 2026-03-18 16:50:06,403 | INFO     | job summary report
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | --------------------------------------------------
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | PanDA job id: 7056951610
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | task id: 49179398
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | errors: (none)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | pilot state: finished 
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | transexitcode: 0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | exeerrorcode: 0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | exeerrordiag: 
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | exitcode: 0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | exitmsg: OK
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | cpuconsumptiontime: 46514 s
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | nevents: 400
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | neventsw: 0
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | pid: 3792342
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | pgrp: 3792342
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | corecount: 4
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | event service: False
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | sizes: {0: 2280311, 11: 2280311, 12113: 2310416, 12114: 2310415, 12116: 2319493, 12118: 2319871}
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | --------------------------------------------------
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | 
[2026-03-18 17:52:38] 2026-03-18 16:50:06,404 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/3
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,423 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 17:52:38] 2026-03-18 16:50:06,424 | INFO     | job 7056951610 has completed (purged errors)
[2026-03-18 17:52:38] 2026-03-18 16:50:06,424 | INFO     | overall cleanup function is called
[2026-03-18 17:52:38] 2026-03-18 16:50:07,132 | INFO     | PID=3785892 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-18 17:52:38] 2026-03-18 16:50:07,133 | INFO     | .. there are 42 such processes running
[2026-03-18 17:52:38] 2026-03-18 16:50:07,430 | INFO     | --- collectZombieJob: --- 10, [3792342]
[2026-03-18 17:52:38] 2026-03-18 16:50:07,431 | INFO     | zombie collector waiting for pid 3792342
[2026-03-18 17:52:38] 2026-03-18 16:50:07,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 17:52:38] 2026-03-18 16:50:07,431 | INFO     | collected zombie processes
[2026-03-18 17:52:38] 2026-03-18 16:50:07,431 | INFO     | will attempt to kill all subprocesses of pid=3792342
[2026-03-18 17:52:38] 2026-03-18 16:50:08,255 | WARNING  | process 3792342 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 17:52:38] 2026-03-18 16:50:08,745 | INFO     | process IDs to be killed: [3792342] (in reverse order)
[2026-03-18 17:52:38] 2026-03-18 16:50:08,927 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 17:52:38] 2026-03-18 16:50:08,927 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 17:52:38] 2026-03-18 16:50:08,927 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-18 17:52:38] 2026-03-18 16:50:08,928 | WARNING  | maxPSS not found in memory monitor output
[2026-03-18 17:52:38] 2026-03-18 16:50:08,928 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7056951610/payload.stdout) since it has not been created yet
[2026-03-18 17:52:38] 2026-03-18 16:50:08,928 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/3
[2026-03-18 17:52:38] 2026-03-18 16:50:08,942 | INFO     | sufficient remaining disk space (22620930048 B)
[2026-03-18 17:52:38] 2026-03-18 16:50:08,943 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-18 17:52:38] 2026-03-18 16:50:08,943 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7056951610/HITS.49179398._000132.pool.root.1 since it does not exist
[2026-03-18 17:52:38] 2026-03-18 16:50:08,982 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 17:52:38] 2026-03-18 16:50:08,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 17:52:38] 2026-03-18 16:50:09,056 | INFO     | did not find any defunct processes belonging to 3792342
[2026-03-18 17:52:38] 2026-03-18 16:50:09,117 | INFO     | did not find any defunct processes belonging to 3792342
[2026-03-18 17:52:38] 2026-03-18 16:50:09,117 | INFO     | ready for new job
[2026-03-18 17:52:38] 2026-03-18 16:50:09,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 17:52:38] 2026-03-18 16:50:09,118 | INFO     | **************************************
[2026-03-18 17:52:38] 2026-03-18 16:50:09,118 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 17:52:38] 2026-03-18 16:50:09,119 | INFO     | **************************************
[2026-03-18 17:52:38] 2026-03-18 16:50:09,119 | INFO     | 
[2026-03-18 17:52:38] 2026-03-18 16:50:09,126 | INFO     | architecture information:
[2026-03-18 17:52:38] 2026-03-18 16:50:09,126 | INFO     | executing command: cat /etc/os-release
[2026-03-18 17:52:38] 2026-03-18 16:50:09,139 | INFO     | cat /etc/os-release:
[2026-03-18 17:52:38] NAME="CentOS Linux"
[2026-03-18 17:52:38] VERSION="7 (Core)"
[2026-03-18 17:52:38] ID="centos"
[2026-03-18 17:52:38] ID_LIKE="rhel fedora"
[2026-03-18 17:52:38] VERSION_ID="7"
[2026-03-18 17:52:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 17:52:38] ANSI_COLOR="0;31"
[2026-03-18 17:52:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 17:52:38] HOME_URL="https://www.centos.org/"
[2026-03-18 17:52:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 17:52:38] 
[2026-03-18 17:52:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 17:52:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 17:52:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 17:52:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 17:52:38] 
[2026-03-18 17:52:38] 2026-03-18 16:50:09,140 | INFO     | **************************************
[2026-03-18 17:52:38] 2026-03-18 16:50:09,515 | INFO     | number of running child processes to parent process 3792342: 1
[2026-03-18 17:52:38] 2026-03-18 16:50:09,515 | INFO     | maximum number of monitored processes: 6
[2026-03-18 17:52:38] 2026-03-18 16:50:09,515 | INFO     | aborting job monitoring since job object (job id=7056951610) has expired
[2026-03-18 17:52:38] 2026-03-18 16:50:09,642 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/3
[2026-03-18 17:52:38] 2026-03-18 16:50:09,658 | INFO     | sufficient remaining disk space (22621978624 B)
[2026-03-18 17:52:38] 2026-03-18 16:50:09,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 17:52:38] 2026-03-18 16:50:09,659 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 17:52:38] 2026-03-18 16:50:09,659 | INFO     | update_server=False
[2026-03-18 17:52:38] 2026-03-18 16:50:09,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 17:52:38] 2026-03-18 16:50:09,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 17:52:38] 2026-03-18 16:50:09,659 | INFO     | will abort loop
[2026-03-18 17:52:38] 2026-03-18 16:50:09,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 17:52:38] 2026-03-18 16:50:10,210 | INFO     | all data control threads have been joined
[2026-03-18 17:52:38] 2026-03-18 16:50:10,597 | INFO     | all job control threads have been joined
[2026-03-18 17:52:38] 2026-03-18 16:50:10,664 | INFO     | [job] retrieve thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:10,664 | INFO     | [job] job monitor thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:10,981 | INFO     | [payload] validate_post thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:10,989 | INFO     | all payload control threads have been joined
[2026-03-18 17:52:38] 2026-03-18 16:50:11,176 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,215 | INFO     | [data] control thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,218 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,311 | INFO     | [data] copytool_in thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 17:52:38] 2026-03-18 16:50:11,483 | INFO     | [payload] failed_post thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,526 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,602 | INFO     | [job] control thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,759 | INFO     | [data] copytool_out thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:11,994 | INFO     | [payload] control thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:12,022 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:12,077 | INFO     | [job] validate thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:12,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 17:52:38] 2026-03-18 16:50:12,420 | INFO     | [job] queue monitor thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:16,338 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 17:52:38] 2026-03-18 16:50:17,037 | INFO     | [monitor] cgroup control has ended
[2026-03-18 17:52:38] 2026-03-18 16:50:17,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22724658317120)>', '<ExcThread(monitor, started 22724413228800)>']
[2026-03-18 17:52:38] 2026-03-18 16:50:22,771 | INFO     | all workflow threads have been joined
[2026-03-18 17:52:38] 2026-03-18 16:50:22,772 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 17:52:38] 2026-03-18 16:50:22,772 | INFO     | traces error code: 0
[2026-03-18 17:52:38] 2026-03-18 16:50:22,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 17:52:38] 2026-03-18 16:50:39,773 | INFO     | PID=3785892 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 17:52:38] 2026-03-18 16:50:39,774 | INFO     | .. there are 45 such processes running
[2026-03-18 17:52:38] 2026-03-18 16:50:39,774 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 17:52:38] 2026-03-18 16:50:39,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 17:52:38] 2026-03-18 16:50:39,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 17:52:38] 2026-03-18 16:50:39,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 17:52:38] 2026-03-18 16:50:39,775 | INFO     | [monitor] control thread has ended
[2026-03-18 17:52:38] 2026-03-18 16:50:39,910 [wrapper] ==== pilot stdout END ====
[2026-03-18 17:52:38] 2026-03-18 16:50:39,913 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 17:52:38] 2026-03-18 16:50:39,916 [wrapper] pilotpid: 3785892
[2026-03-18 17:52:38] 2026-03-18 16:50:39,918 [wrapper] Pilot exit status: 0
[2026-03-18 17:52:38] 2026-03-18 16:50:39,926 [wrapper] pandaids: 7056951610
[2026-03-18 17:52:38] 2026-03-18 16:50:40,031 [wrapper] cleanup supervisor_pilot  514207 3785893
[2026-03-18 17:52:38] 2026-03-18 16:50:40,034 [wrapper] Test setup, not cleaning
[2026-03-18 17:52:38] 2026-03-18 16:50:40,037 [wrapper] apfmon messages muted
[2026-03-18 17:52:38] 2026-03-18 16:50:40,040 [wrapper] ==== wrapper stdout END ====
[2026-03-18 17:52:38] 2026-03-18 16:50:40,042 [wrapper] ==== wrapper stderr END ====
[2026-03-18 17:52:38]  *** Error codes and diagnostics ***
[2026-03-18 17:52:38]     "exeErrorCode": 0,
[2026-03-18 17:52:38]     "exeErrorDiag": "",
[2026-03-18 17:52:38]     "pilotErrorCode": 0,
[2026-03-18 17:52:38]     "pilotErrorDiag": "",
[2026-03-18 17:52:38]  *** Listing of results directory ***
[2026-03-18 17:52:38] total 482964
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-18 17:52:38] -rwx------. 1 boinc boinc     36322 Mar 16 16:07 runpilot2-wrapper.sh
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:11 queuedata.json
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc       100 Mar 18 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 17:52:38] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 14:27 run_atlas
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc       105 Mar 18 14:27 job.xml
[2026-03-18 17:52:38] -rw-r--r--. 2 boinc boinc 243408935 Mar 18 14:27 EVNT.49131349._000006.pool.root.1
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc      6709 Mar 18 14:27 init_data.xml
[2026-03-18 17:52:38] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:27 start_atlas.sh
[2026-03-18 17:52:38] drwxrwx--x. 2 boinc boinc      4096 Mar 18 14:27 shared
[2026-03-18 17:52:38] -rw-r--r--. 2 boinc boinc    597541 Mar 18 14:27 input.tar.gz
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc         0 Mar 18 14:27 boinc_lockfile
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc      2610 Mar 18 14:27 pandaJob.out
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc   1010909 Mar 18 14:27 agis_schedconf.cvmfs.json
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc       445 Mar 18 14:27 workernode_map.json
[2026-03-18 17:52:38] drwx------. 5 boinc boinc      4096 Mar 18 14:27 pilot3
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc 243082453 Mar 18 17:49 HITS.49179398._000132.pool.root.1
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc       529 Mar 18 17:49 boinc_task_state.xml
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc      1032 Mar 18 17:49 memory_monitor_summary.json
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc   1511579 Mar 18 17:50 agis_ddmendpoints.agis.ALL.json
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc    366071 Mar 18 17:50 log.49179398._000132.job.log.tgz.1
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc      6353 Mar 18 17:50 heartbeat.json
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc        95 Mar 18 17:50 pilot_heartbeat.json
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc       823 Mar 18 17:50 pilotlog.txt
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc   1694621 Mar 18 17:50 log.49179398._000132.job.log.1
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc       357 Mar 18 17:50 output.list
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc       620 Mar 18 17:50 runtime_log
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc   2078720 Mar 18 17:50 result.tar.gz
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc      9222 Mar 18 17:50 runtime_log.err
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc       666 Mar 18 17:50 Ub6MDm6iOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVtxLDmmBVz5n.diag
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc        27 Mar 18 17:52 wrapper_checkpoint.txt
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc      8192 Mar 18 17:52 boinc_mmap_file
[2026-03-18 17:52:38] -rw-r--r--. 1 boinc boinc     21426 Mar 18 17:52 stderr.txt
[2026-03-18 17:52:38] HITS file was successfully produced:
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc 243082453 Mar 18 17:49 shared/HITS.pool.root.1
[2026-03-18 17:52:38]  *** Contents of shared directory: ***
[2026-03-18 17:52:38] total 477736
[2026-03-18 17:52:38] -rw-r--r--. 2 boinc boinc 243408935 Mar 18 14:27 ATLAS.root_0
[2026-03-18 17:52:38] -rw-r--r--. 2 boinc boinc     15845 Mar 18 14:27 start_atlas.sh
[2026-03-18 17:52:38] -rw-r--r--. 2 boinc boinc    597541 Mar 18 14:27 input.tar.gz
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc 243082453 Mar 18 17:49 HITS.pool.root.1
[2026-03-18 17:52:38] -rw-------. 1 boinc boinc   2078720 Mar 18 17:50 result.tar.gz
17:52:39 (3781312): run_atlas exited; CPU time 47098.747051
17:52:39 (3781312): called boinc_finish(0)

</stderr_txt>
]]>

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