Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:28:37 (512292): wrapper (7.7.26015): starting
09:28:37 (512292): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 09:28:37] Arguments: --nthreads 4
[2026-03-19 09:28:37] Threads: 4
[2026-03-19 09:28:37] Checking for CVMFS
[2026-03-19 09:28:37] No cvmfs_config command found, will try listing directly
[2026-03-19 09:28:37] CVMFS is ok
[2026-03-19 09:28:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 09:28:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 09:28:37] Further information can be found at the LHC@home message board.
[2026-03-19 09:28:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 09:28:37] Checking for apptainer binary...
[2026-03-19 09:28:37] which: no apptainer in ((null))
[2026-03-19 09:28:37] apptainer is not installed, using version from CVMFS
[2026-03-19 09:28:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 09:28:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot148/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-19 09:28:37] apptainer works
[2026-03-19 09:28:37] Set ATHENA_PROC_NUMBER=4
[2026-03-19 09:28:37] Set ATHENA_CORE_NUMBER=4
[2026-03-19 09:28:37] Starting ATLAS job with PandaID=7056971895
[2026-03-19 09:28:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot148/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 12:58:18]  *** The last 200 lines of the pilot log: ***
[2026-03-19 12:58:18] 2026-03-19 11:57:16,316 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-19 12:58:18] 2026-03-19 11:57:17,370 | INFO     | job 7056971895 has state=finished
[2026-03-19 12:58:18] 2026-03-19 11:57:17,370 | INFO     | preparing for final server update for job 7056971895 in state='finished'
[2026-03-19 12:58:18] 2026-03-19 11:57:17,370 | INFO     | reading metadata from: /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7056971895/jobReport.json
[2026-03-19 12:58:18] 2026-03-19 11:57:17,372 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot148/slots/0/workernode_map.json
[2026-03-19 12:58:18] 2026-03-19 11:57:17,372 | INFO     | this job has now completed (state=finished)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,372 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,372 | INFO     | log transfer has been attempted: DONE
[2026-03-19 12:58:18] 2026-03-19 11:57:17,372 | INFO     | job 7056971895 has finished - writing final server update
[2026-03-19 12:58:18] 2026-03-19 11:57:17,372 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391122/.job.ad'
[2026-03-19 12:58:18] 2026-03-19 11:57:17,372 | INFO     | total number of processed events: 400 (read)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,390 | INFO     | using path: /var/lib/boinc/var/slot148/slots/0/PanDA_Pilot-7056971895/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,390 | INFO     | extracted standard info from prmon json
[2026-03-19 12:58:18] 2026-03-19 11:57:17,390 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 12:58:18] 2026-03-19 11:57:17,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 12:58:18] 2026-03-19 11:57:17,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 12:58:18] 2026-03-19 11:57:17,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 12:58:18] 2026-03-19 11:57:17,393 | INFO     | fitting pss+swap vs Time
[2026-03-19 12:58:18] 2026-03-19 11:57:17,393 | INFO     | sum of square deviations: 2671343110.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,394 | INFO     | sum of deviations: 10998457807.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,394 | INFO     | mean x: 1773915177.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,394 | INFO     | mean y: 2342144.643902439
[2026-03-19 12:58:18] 2026-03-19 11:57:17,394 | INFO     | intersect: -7301224048.106019
[2026-03-19 12:58:18] 2026-03-19 11:57:17,394 | INFO     | chi2: 1.0965001200006355
[2026-03-19 12:58:18] 2026-03-19 11:57:17,394 | INFO     | sum of square deviations: 2480604650.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,395 | INFO     | sum of deviations: 10673704177.000011
[2026-03-19 12:58:18] 2026-03-19 11:57:17,395 | INFO     | mean x: 1773915024.5
[2026-03-19 12:58:18] 2026-03-19 11:57:17,395 | INFO     | mean y: 2341884.94
[2026-03-19 12:58:18] 2026-03-19 11:57:17,395 | INFO     | intersect: -7630573020.161355
[2026-03-19 12:58:18] 2026-03-19 11:57:17,395 | INFO     | chi2: 1.0969799600989791
[2026-03-19 12:58:18] 2026-03-19 11:57:17,395 | INFO     | current chi2=1.0969799600989791 (change=-0.0437610620912105 %)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,395 | INFO     | right removable region: 199
[2026-03-19 12:58:18] 2026-03-19 11:57:17,396 | INFO     | sum of square deviations: 2480604650.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,396 | INFO     | sum of deviations: -8775048158.5
[2026-03-19 12:58:18] 2026-03-19 11:57:17,396 | INFO     | mean x: 1773915329.5
[2026-03-19 12:58:18] 2026-03-19 11:57:17,396 | INFO     | mean y: 2357718.075
[2026-03-19 12:58:18] 2026-03-19 11:57:17,396 | INFO     | intersect: 6277518270.347566
[2026-03-19 12:58:18] 2026-03-19 11:57:17,397 | INFO     | chi2: 0.01535076951429429
[2026-03-19 12:58:18] 2026-03-19 11:57:17,397 | INFO     | current chi2=0.01535076951429429 (change=98.60002117334147 %)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,397 | INFO     | sum of square deviations: 2299168690.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,397 | INFO     | sum of deviations: -7808262361.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,397 | INFO     | mean x: 1773915482.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,397 | INFO     | mean y: 2356901.2871794873
[2026-03-19 12:58:18] 2026-03-19 11:57:17,397 | INFO     | intersect: 6026794146.775146
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | chi2: 0.015096469847337084
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | current chi2=0.015096469847337084 (change=1.6565923077693785 %)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | left removable region: 20
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | sum of square deviations: 1778377530.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | sum of deviations: -4030057842.0000005
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | mean x: 1773915604.0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | mean y: 2353518.3016759777
[2026-03-19 12:58:18] 2026-03-19 11:57:17,398 | INFO     | intersect: 4022299997.8022165
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | chi2: 0.010653975874212702
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | current memory leak: -2.27 B/s (using 179 data points, chi2=0.01)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | could have reported an average CPU frequency of 3594 MHz (10 samples)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | ..............................
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . Timing measurements:
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . get job = 0 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . initial setup = 5 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . payload setup = 7 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . stage-in = 0 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . payload execution = 12480 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . stage-out = 0 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | . log creation = 0 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,399 | INFO     | ..............................
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | 
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | job summary report
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | --------------------------------------------------
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | PanDA job id: 7056971895
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | task id: 49180974
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | errors: (none)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | pilot state: finished 
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | transexitcode: 0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | exeerrorcode: 0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | exeerrordiag: 
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | exitcode: 0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | exitmsg: OK
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | cpuconsumptiontime: 47267 s
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | nevents: 400
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | neventsw: 0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | pid: 531849
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | pgrp: 531849
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | corecount: 4
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | event service: False
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | sizes: {0: 2280053, 1: 2280315, 11: 2280343, 12492: 2310446, 12493: 2319468, 12494: 2319524, 12495: 2319846}
[2026-03-19 12:58:18] 2026-03-19 11:57:17,448 | INFO     | --------------------------------------------------
[2026-03-19 12:58:18] 2026-03-19 11:57:17,449 | INFO     | 
[2026-03-19 12:58:18] 2026-03-19 11:57:17,449 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot148/slots/0
[2026-03-19 12:58:18] 2026-03-19 11:57:17,464 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,464 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,464 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | job 7056971895 has completed (purged errors)
[2026-03-19 12:58:18] 2026-03-19 11:57:17,465 | INFO     | overall cleanup function is called
[2026-03-19 12:58:18] 2026-03-19 11:57:18,471 | INFO     | --- collectZombieJob: --- 10, [531849]
[2026-03-19 12:58:18] 2026-03-19 11:57:18,472 | INFO     | zombie collector waiting for pid 531849
[2026-03-19 12:58:18] 2026-03-19 11:57:18,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 12:58:18] 2026-03-19 11:57:18,472 | INFO     | collected zombie processes
[2026-03-19 12:58:18] 2026-03-19 11:57:18,472 | INFO     | will attempt to kill all subprocesses of pid=531849
[2026-03-19 12:58:18] 2026-03-19 11:57:19,022 | INFO     | process IDs to be killed: [531849] (in reverse order)
[2026-03-19 12:58:18] 2026-03-19 11:57:19,332 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 12:58:18] 2026-03-19 11:57:19,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 12:58:18] 2026-03-19 11:57:19,363 | INFO     | did not find any defunct processes belonging to 531849
[2026-03-19 12:58:18] 2026-03-19 11:57:19,393 | INFO     | did not find any defunct processes belonging to 531849
[2026-03-19 12:58:18] 2026-03-19 11:57:19,393 | INFO     | ready for new job
[2026-03-19 12:58:18] 2026-03-19 11:57:19,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 12:58:18] 2026-03-19 11:57:19,394 | INFO     | **************************************
[2026-03-19 12:58:18] 2026-03-19 11:57:19,394 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 12:58:18] 2026-03-19 11:57:19,394 | INFO     | **************************************
[2026-03-19 12:58:18] 2026-03-19 11:57:19,395 | INFO     | 
[2026-03-19 12:58:18] 2026-03-19 11:57:19,400 | INFO     | architecture information:
[2026-03-19 12:58:18] 2026-03-19 11:57:19,400 | INFO     | executing command: cat /etc/os-release
[2026-03-19 12:58:18] 2026-03-19 11:57:19,421 | INFO     | cat /etc/os-release:
[2026-03-19 12:58:18] NAME="CentOS Linux"
[2026-03-19 12:58:18] VERSION="7 (Core)"
[2026-03-19 12:58:18] ID="centos"
[2026-03-19 12:58:18] ID_LIKE="rhel fedora"
[2026-03-19 12:58:18] VERSION_ID="7"
[2026-03-19 12:58:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 12:58:18] ANSI_COLOR="0;31"
[2026-03-19 12:58:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 12:58:18] HOME_URL="https://www.centos.org/"
[2026-03-19 12:58:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 12:58:18] 
[2026-03-19 12:58:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 12:58:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 12:58:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 12:58:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 12:58:18] 
[2026-03-19 12:58:18] 2026-03-19 11:57:19,421 | INFO     | **************************************
[2026-03-19 12:58:18] 2026-03-19 11:57:19,924 | INFO     | executing command: df -mP /var/lib/boinc/var/slot148/slots/0
[2026-03-19 12:58:18] 2026-03-19 11:57:19,941 | INFO     | sufficient remaining disk space (55051288576 B)
[2026-03-19 12:58:18] 2026-03-19 11:57:19,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 12:58:18] 2026-03-19 11:57:19,941 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 12:58:18] 2026-03-19 11:57:19,941 | INFO     | update_server=False
[2026-03-19 12:58:18] 2026-03-19 11:57:19,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 12:58:18] 2026-03-19 11:57:19,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 12:58:18] 2026-03-19 11:57:19,941 | INFO     | aborting loop
[2026-03-19 12:58:18] 2026-03-19 11:57:20,022 | INFO     | all payload control threads have been joined
[2026-03-19 12:58:18] 2026-03-19 11:57:20,240 | INFO     | all job control threads have been joined
[2026-03-19 12:58:18] 2026-03-19 11:57:20,518 | INFO     | all data control threads have been joined
[2026-03-19 12:58:18] 2026-03-19 11:57:20,945 | INFO     | [job] retrieve thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:20,946 | INFO     | [job] job monitor thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,027 | INFO     | [payload] control thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,175 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,245 | INFO     | [job] control thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 12:58:18] 2026-03-19 11:57:21,408 | INFO     | [payload] validate_post thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,523 | INFO     | [data] control thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,607 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,663 | INFO     | [job] validate thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:21,725 | INFO     | [payload] failed_post thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:22,026 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:22,335 | INFO     | [data] copytool_in thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:22,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 12:58:18] 2026-03-19 11:57:22,430 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:22,458 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 12:58:18] 2026-03-19 11:57:23,289 | INFO     | [data] copytool_out thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:23,463 | INFO     | [job] queue monitor thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:26,424 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 12:58:18] 2026-03-19 11:57:49,933 | INFO     | PID=517766 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-19 12:58:18] 2026-03-19 11:57:49,933 | INFO     | .. there are 46 such processes running
[2026-03-19 12:58:18] 2026-03-19 11:57:49,933 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 12:58:18] 2026-03-19 11:57:49,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 12:58:18] 2026-03-19 11:57:49,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 12:58:18] 2026-03-19 11:58:11,877 | INFO     | [monitor] cgroup control has ended
[2026-03-19 12:58:18] 2026-03-19 11:58:12,689 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22528958310208)>', '<ExcThread(monitor, started 22528721700608)>']
[2026-03-19 12:58:18] 2026-03-19 11:58:13,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 12:58:18] 2026-03-19 11:58:13,050 | INFO     | [monitor] control thread has ended
[2026-03-19 12:58:18] 2026-03-19 11:58:17,714 | INFO     | all workflow threads have been joined
[2026-03-19 12:58:18] 2026-03-19 11:58:17,715 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 12:58:18] 2026-03-19 11:58:17,715 | INFO     | traces error code: 0
[2026-03-19 12:58:18] 2026-03-19 11:58:17,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 12:58:18] 2026-03-19 11:58:17,839 [wrapper] ==== pilot stdout END ====
[2026-03-19 12:58:18] 2026-03-19 11:58:17,843 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 12:58:18] 2026-03-19 11:58:17,855 [wrapper] pilotpid: 517766
[2026-03-19 12:58:18] 2026-03-19 11:58:17,879 [wrapper] Pilot exit status: 0
[2026-03-19 12:58:18] 2026-03-19 11:58:17,945 [wrapper] pandaids: 7056971895
[2026-03-19 12:58:18] 2026-03-19 11:58:18,088 [wrapper] cleanup supervisor_pilot 1518828 517767
[2026-03-19 12:58:18] 2026-03-19 11:58:18,107 [wrapper] Test setup, not cleaning
[2026-03-19 12:58:18] 2026-03-19 11:58:18,111 [wrapper] apfmon messages muted
[2026-03-19 12:58:18] 2026-03-19 11:58:18,120 [wrapper] ==== wrapper stdout END ====
[2026-03-19 12:58:18] 2026-03-19 11:58:18,122 [wrapper] ==== wrapper stderr END ====
[2026-03-19 12:58:18]  *** Error codes and diagnostics ***
[2026-03-19 12:58:18]     "exeErrorCode": 0,
[2026-03-19 12:58:18]     "exeErrorDiag": "",
[2026-03-19 12:58:18]     "pilotErrorCode": 0,
[2026-03-19 12:58:18]     "pilotErrorDiag": "",
[2026-03-19 12:58:18]  *** Listing of results directory ***
[2026-03-19 12:58:18] total 471892
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc      5111 Mar 16 17:40 queuedata.json
[2026-03-19 12:58:18] -rwx------. 1 boinc boinc     36322 Mar 16 17:40 runpilot2-wrapper.sh
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc       100 Mar 19 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 12:58:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 09:28 run_atlas
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc       105 Mar 19 09:28 job.xml
[2026-03-19 12:58:18] -rw-r--r--. 2 boinc boinc     15845 Mar 19 09:28 start_atlas.sh
[2026-03-19 12:58:18] drwxrwx--x. 2 boinc boinc      4096 Mar 19 09:28 shared
[2026-03-19 12:58:18] -rw-r--r--. 2 boinc boinc    597544 Mar 19 09:28 input.tar.gz
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc      6708 Mar 19 09:28 init_data.xml
[2026-03-19 12:58:18] -rw-r--r--. 2 boinc boinc 241473570 Mar 19 09:28 EVNT.49134217._000005.pool.root.1
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc         0 Mar 19 09:28 boinc_lockfile
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc      2614 Mar 19 09:28 pandaJob.out
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc   1010816 Mar 19 09:28 agis_schedconf.cvmfs.json
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc       441 Mar 19 09:28 workernode_map.json
[2026-03-19 12:58:18] drwx------. 5 boinc boinc      4096 Mar 19 09:28 pilot3
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc 233585812 Mar 19 12:56 HITS.49180974._000108.pool.root.1
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc       529 Mar 19 12:56 boinc_task_state.xml
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc      1027 Mar 19 12:57 memory_monitor_summary.json
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc        95 Mar 19 12:57 pilot_heartbeat.json
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc   1511579 Mar 19 12:57 agis_ddmendpoints.agis.ALL.json
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc    372693 Mar 19 12:57 log.49180974._000108.job.log.tgz.1
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc      6340 Mar 19 12:57 heartbeat.json
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc      8192 Mar 19 12:57 boinc_mmap_file
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc        27 Mar 19 12:57 wrapper_checkpoint.txt
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc      4829 Mar 19 12:58 pilotlog.txt
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc   1736052 Mar 19 12:58 log.49180974._000108.job.log.1
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc       357 Mar 19 12:58 output.list
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc       620 Mar 19 12:58 runtime_log
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc   2129920 Mar 19 12:58 result.tar.gz
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc      9222 Mar 19 12:58 runtime_log.err
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc       665 Mar 19 12:58 CxHMDm6AQM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSVyLDm9y3Wmm.diag
[2026-03-19 12:58:18] -rw-r--r--. 1 boinc boinc     21128 Mar 19 12:58 stderr.txt
[2026-03-19 12:58:18] HITS file was successfully produced:
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc 233585812 Mar 19 12:56 shared/HITS.pool.root.1
[2026-03-19 12:58:18]  *** Contents of shared directory: ***
[2026-03-19 12:58:18] total 466616
[2026-03-19 12:58:18] -rw-r--r--. 2 boinc boinc     15845 Mar 19 09:28 start_atlas.sh
[2026-03-19 12:58:18] -rw-r--r--. 2 boinc boinc    597544 Mar 19 09:28 input.tar.gz
[2026-03-19 12:58:18] -rw-r--r--. 2 boinc boinc 241473570 Mar 19 09:28 ATLAS.root_0
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc 233585812 Mar 19 12:56 HITS.pool.root.1
[2026-03-19 12:58:18] -rw-------. 1 boinc boinc   2129920 Mar 19 12:58 result.tar.gz
12:58:19 (512292): run_atlas exited; CPU time 47879.386591
12:58:19 (512292): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN