Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:44 (3403482): wrapper (7.7.26015): starting
20:53:44 (3403482): wrapper: running run_atlas (--nthreads 4)
[2026-03-17 20:53:44] Arguments: --nthreads 4
[2026-03-17 20:53:44] Threads: 4
[2026-03-17 20:53:44] Checking for CVMFS
[2026-03-17 20:53:44] No cvmfs_config command found, will try listing directly
[2026-03-17 20:53:44] CVMFS is ok
[2026-03-17 20:53:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-17 20:53:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-17 20:53:44] Further information can be found at the LHC@home message board.
[2026-03-17 20:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 20:53:44] Checking for apptainer binary...
[2026-03-17 20:53:44] which: no apptainer in ((null))
[2026-03-17 20:53:44] apptainer is not installed, using version from CVMFS
[2026-03-17 20:53:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 20:53:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-17 20:53:44] apptainer works
[2026-03-17 20:53:44] Set ATHENA_PROC_NUMBER=4
[2026-03-17 20:53:44] Set ATHENA_CORE_NUMBER=4
[2026-03-17 20:53:44] Starting ATLAS job with PandaID=7056946051
[2026-03-17 20:53:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 00:07:22]  *** The last 200 lines of the pilot log: ***
[2026-03-18 00:07:22] 2026-03-17 23:06:22,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 00:07:22] 2026-03-17 23:06:22,443 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 00:07:22] 2026-03-17 23:06:22,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 00:07:22] 2026-03-17 23:06:22,445 | INFO     | fitting pss+swap vs Time
[2026-03-18 00:07:22] 2026-03-17 23:06:22,445 | INFO     | sum of square deviations: 2093397390.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,446 | INFO     | sum of deviations: 20494140720.000008
[2026-03-18 00:07:22] 2026-03-17 23:06:22,446 | INFO     | mean x: 1773782992.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,446 | INFO     | mean y: 2326446.3439153438
[2026-03-18 00:07:22] 2026-03-17 23:06:22,446 | INFO     | intersect: -17362822864.74348
[2026-03-18 00:07:22] 2026-03-17 23:06:22,446 | INFO     | chi2: 1.0958030779147667
[2026-03-18 00:07:22] 2026-03-17 23:06:22,446 | INFO     | sum of square deviations: 1931608310.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | sum of deviations: 19728131390.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | mean x: 1773782839.5
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | mean y: 2325724.152173913
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | intersect: -18113883827.14308
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | chi2: 1.0964384981576745
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | current chi2=1.0964384981576745 (change=-0.057986718208248286 %)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | right removable region: 183
[2026-03-18 00:07:22] 2026-03-17 23:06:22,447 | INFO     | sum of square deviations: 1931608310.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,448 | INFO     | sum of deviations: 1605329192.0000005
[2026-03-18 00:07:22] 2026-03-17 23:06:22,448 | INFO     | mean x: 1773783144.5
[2026-03-18 00:07:22] 2026-03-17 23:06:22,448 | INFO     | mean y: 2343974.195652174
[2026-03-18 00:07:22] 2026-03-17 23:06:22,448 | INFO     | intersect: -1471819212.7205424
[2026-03-18 00:07:22] 2026-03-17 23:06:22,448 | INFO     | chi2: 0.0065608199327583635
[2026-03-18 00:07:22] 2026-03-17 23:06:22,448 | INFO     | current chi2=0.0065608199327583635 (change=99.40127746809738 %)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,448 | INFO     | sum of square deviations: 1778377530.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | sum of deviations: 2236322403.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | mean x: 1773783297.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | mean y: 2343342.74301676
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | intersect: -2228201779.556354
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | chi2: 0.0057521277598140425
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | current chi2=0.0057521277598140425 (change=12.326083953417125 %)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | left removable region: 20
[2026-03-18 00:07:22] 2026-03-17 23:06:22,449 | INFO     | sum of square deviations: 1342841922.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | sum of deviations: 4019042584.000001
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | mean x: 1773783419.0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | mean y: 2340554.656441718
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | intersect: -5306483201.111079
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | chi2: 0.0008055528787493157
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | current memory leak: 2.99 B/s (using 163 data points, chi2=0.00)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | could have reported an average CPU frequency of 3576 MHz (10 samples)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | ..............................
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | . Timing measurements:
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | . get job = 0 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | . initial setup = 5 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | . payload setup = 5 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,450 | INFO     | . stage-in = 0 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,451 | INFO     | . payload execution = 11521 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,451 | INFO     | . stage-out = 0 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,451 | INFO     | . log creation = 0 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,451 | INFO     | ..............................
[2026-03-18 00:07:22] 2026-03-17 23:06:22,501 | INFO     | 
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | job summary report
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | --------------------------------------------------
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | PanDA job id: 7056946051
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | task id: 49178984
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | errors: (none)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | pilot state: finished 
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | transexitcode: 0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | exeerrorcode: 0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | exeerrordiag: 
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | exitcode: 0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | exitmsg: OK
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | cpuconsumptiontime: 43704 s
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | nevents: 400
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | neventsw: 0
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | pid: 3414028
[2026-03-18 00:07:22] 2026-03-17 23:06:22,502 | INFO     | pgrp: 3414028
[2026-03-18 00:07:22] 2026-03-17 23:06:22,503 | INFO     | corecount: 4
[2026-03-18 00:07:22] 2026-03-17 23:06:22,503 | INFO     | event service: False
[2026-03-18 00:07:22] 2026-03-17 23:06:22,503 | INFO     | sizes: {0: 2280137, 1: 2280371, 11: 2280371, 11530: 2309921, 11531: 2318943, 11532: 2318999, 11534: 2319321}
[2026-03-18 00:07:22] 2026-03-17 23:06:22,503 | INFO     | --------------------------------------------------
[2026-03-18 00:07:22] 2026-03-17 23:06:22,503 | INFO     | 
[2026-03-18 00:07:22] 2026-03-17 23:06:22,503 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/11
[2026-03-18 00:07:22] 2026-03-17 23:06:22,525 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,525 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,525 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,525 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | job 7056946051 has completed (purged errors)
[2026-03-18 00:07:22] 2026-03-17 23:06:22,526 | INFO     | overall cleanup function is called
[2026-03-18 00:07:22] 2026-03-17 23:06:23,533 | INFO     | --- collectZombieJob: --- 10, [3414028]
[2026-03-18 00:07:22] 2026-03-17 23:06:23,533 | INFO     | zombie collector waiting for pid 3414028
[2026-03-18 00:07:22] 2026-03-17 23:06:23,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 00:07:22] 2026-03-17 23:06:23,533 | INFO     | collected zombie processes
[2026-03-18 00:07:22] 2026-03-17 23:06:23,533 | INFO     | will attempt to kill all subprocesses of pid=3414028
[2026-03-18 00:07:22] 2026-03-17 23:06:24,152 | INFO     | process IDs to be killed: [3414028] (in reverse order)
[2026-03-18 00:07:22] 2026-03-17 23:06:24,493 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 00:07:22] 2026-03-17 23:06:24,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 00:07:22] 2026-03-17 23:06:24,532 | INFO     | did not find any defunct processes belonging to 3414028
[2026-03-18 00:07:22] 2026-03-17 23:06:24,568 | INFO     | did not find any defunct processes belonging to 3414028
[2026-03-18 00:07:22] 2026-03-17 23:06:24,569 | INFO     | ready for new job
[2026-03-18 00:07:22] 2026-03-17 23:06:24,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 00:07:22] 2026-03-17 23:06:24,571 | INFO     | **************************************
[2026-03-18 00:07:22] 2026-03-17 23:06:24,571 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 00:07:22] 2026-03-17 23:06:24,571 | INFO     | **************************************
[2026-03-18 00:07:22] 2026-03-17 23:06:24,571 | INFO     | 
[2026-03-18 00:07:22] 2026-03-17 23:06:24,577 | INFO     | architecture information:
[2026-03-18 00:07:22] 2026-03-17 23:06:24,579 | INFO     | executing command: cat /etc/os-release
[2026-03-18 00:07:22] 2026-03-17 23:06:24,611 | INFO     | cat /etc/os-release:
[2026-03-18 00:07:22] NAME="CentOS Linux"
[2026-03-18 00:07:22] VERSION="7 (Core)"
[2026-03-18 00:07:22] ID="centos"
[2026-03-18 00:07:22] ID_LIKE="rhel fedora"
[2026-03-18 00:07:22] VERSION_ID="7"
[2026-03-18 00:07:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 00:07:22] ANSI_COLOR="0;31"
[2026-03-18 00:07:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 00:07:22] HOME_URL="https://www.centos.org/"
[2026-03-18 00:07:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 00:07:22] 
[2026-03-18 00:07:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 00:07:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 00:07:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 00:07:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 00:07:22] 
[2026-03-18 00:07:22] 2026-03-17 23:06:24,611 | INFO     | **************************************
[2026-03-18 00:07:22] 2026-03-17 23:06:25,114 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/11
[2026-03-18 00:07:22] 2026-03-17 23:06:25,152 | INFO     | sufficient remaining disk space (29633806336 B)
[2026-03-18 00:07:22] 2026-03-17 23:06:25,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 00:07:22] 2026-03-17 23:06:25,153 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 00:07:22] 2026-03-17 23:06:25,153 | INFO     | update_server=False
[2026-03-18 00:07:22] 2026-03-17 23:06:25,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 00:07:22] 2026-03-17 23:06:25,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 00:07:22] 2026-03-17 23:06:25,319 | INFO     | all data control threads have been joined
[2026-03-18 00:07:22] 2026-03-17 23:06:25,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 00:07:22] 2026-03-17 23:06:26,062 | WARNING  | process 3414028 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 00:07:22] 2026-03-17 23:06:26,180 | INFO     | [job] retrieve thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:26,324 | INFO     | [data] control thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:26,475 | INFO     | all payload control threads have been joined
[2026-03-18 00:07:22] 2026-03-17 23:06:26,551 | INFO     | [job] validate thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:26,555 | INFO     | using path: /var/lib/boinc/var/slot72/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 00:07:22] 2026-03-17 23:06:26,555 | INFO     | using path: /var/lib/boinc/var/slot72/slots/11/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 00:07:22] 2026-03-17 23:06:26,555 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-18 00:07:22] 2026-03-17 23:06:26,556 | WARNING  | maxPSS not found in memory monitor output
[2026-03-18 00:07:22] 2026-03-17 23:06:26,556 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot72/slots/11/PanDA_Pilot-7056946051/payload.stdout) since it has not been created yet
[2026-03-18 00:07:22] 2026-03-17 23:06:26,556 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/11
[2026-03-18 00:07:22] 2026-03-17 23:06:26,564 | INFO     | all job control threads have been joined
[2026-03-18 00:07:22] 2026-03-17 23:06:26,586 | INFO     | sufficient remaining disk space (29633806336 B)
[2026-03-18 00:07:22] 2026-03-17 23:06:26,586 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-18 00:07:22] 2026-03-17 23:06:26,586 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot72/slots/11/PanDA_Pilot-7056946051/HITS.49178984._000123.pool.root.1 since it does not exist
[2026-03-18 00:07:22] 2026-03-17 23:06:26,924 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:26,974 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:27,134 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:27,164 | INFO     | [payload] failed_post thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:27,189 | INFO     | [data] copytool_out thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:27,206 | INFO     | number of running child processes to parent process 3414028: 1
[2026-03-18 00:07:22] 2026-03-17 23:06:27,207 | INFO     | maximum number of monitored processes: 6
[2026-03-18 00:07:22] 2026-03-17 23:06:27,214 | INFO     | aborting job monitoring since job object (job id=7056946051) has expired
[2026-03-18 00:07:22] 2026-03-17 23:06:27,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 00:07:22] 2026-03-17 23:06:27,214 | INFO     | will abort loop
[2026-03-18 00:07:22] 2026-03-17 23:06:27,337 | INFO     | [data] copytool_in thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:27,484 | INFO     | [payload] control thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:27,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 00:07:22] 2026-03-17 23:06:27,569 | INFO     | [job] control thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:27,732 | INFO     | [payload] validate_post thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:28,219 | INFO     | [job] job monitor thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:28,520 | INFO     | [job] queue monitor thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:29,795 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:35,334 | INFO     | job.realtimelogging is not enabled
[2026-03-18 00:07:22] 2026-03-17 23:06:36,339 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 00:07:22] 2026-03-17 23:06:55,150 | INFO     | PID=3408090 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 00:07:22] 2026-03-17 23:06:55,150 | INFO     | .. there are 45 such processes running
[2026-03-18 00:07:22] 2026-03-17 23:06:55,150 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 00:07:22] 2026-03-17 23:06:55,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 00:07:22] 2026-03-17 23:06:55,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 00:07:22] 2026-03-17 23:07:16,103 | INFO     | [monitor] cgroup control has ended
[2026-03-18 00:07:22] 2026-03-17 23:07:17,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23068172588864)>', '<ExcThread(monitor, started 23067866691328)>']
[2026-03-18 00:07:22] 2026-03-17 23:07:17,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 00:07:22] 2026-03-17 23:07:17,264 | INFO     | [monitor] control thread has ended
[2026-03-18 00:07:22] 2026-03-17 23:07:22,247 | INFO     | all workflow threads have been joined
[2026-03-18 00:07:22] 2026-03-17 23:07:22,247 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 00:07:22] 2026-03-17 23:07:22,247 | INFO     | traces error code: 0
[2026-03-18 00:07:22] 2026-03-17 23:07:22,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 00:07:22] 2026-03-17 23:07:22,403 [wrapper] ==== pilot stdout END ====
[2026-03-18 00:07:22] 2026-03-17 23:07:22,405 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 00:07:22] 2026-03-17 23:07:22,411 [wrapper] pilotpid: 3408090
[2026-03-18 00:07:22] 2026-03-17 23:07:22,421 [wrapper] Pilot exit status: 0
[2026-03-18 00:07:22] 2026-03-17 23:07:22,506 [wrapper] pandaids: 7056946051
[2026-03-18 00:07:22] 2026-03-17 23:07:22,682 [wrapper] cleanup supervisor_pilot   79391 3408091
[2026-03-18 00:07:22] 2026-03-17 23:07:22,696 [wrapper] Test setup, not cleaning
[2026-03-18 00:07:22] 2026-03-17 23:07:22,700 [wrapper] apfmon messages muted
[2026-03-18 00:07:22] 2026-03-17 23:07:22,702 [wrapper] ==== wrapper stdout END ====
[2026-03-18 00:07:22] 2026-03-17 23:07:22,703 [wrapper] ==== wrapper stderr END ====
[2026-03-18 00:07:22]  *** Error codes and diagnostics ***
[2026-03-18 00:07:22]     "exeErrorCode": 0,
[2026-03-18 00:07:22]     "exeErrorDiag": "",
[2026-03-18 00:07:22]     "pilotErrorCode": 0,
[2026-03-18 00:07:22]     "pilotErrorDiag": "",
[2026-03-18 00:07:22]  *** Listing of results directory ***
[2026-03-18 00:07:22] total 421936
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:03 pilot3.tar.gz
[2026-03-18 00:07:22] -rwx------. 1 boinc boinc     36322 Mar 16 16:06 runpilot2-wrapper.sh
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:09 queuedata.json
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc       100 Mar 17 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 00:07:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 20:53 run_atlas
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc       105 Mar 17 20:53 job.xml
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc      6708 Mar 17 20:53 init_data.xml
[2026-03-18 00:07:22] -rw-r--r--. 2 boinc boinc 224925246 Mar 17 20:53 EVNT.49130292._000005.pool.root.1
[2026-03-18 00:07:22] -rw-r--r--. 2 boinc boinc     15845 Mar 17 20:53 start_atlas.sh
[2026-03-18 00:07:22] drwxrwx--x. 2 boinc boinc      4096 Mar 17 20:53 shared
[2026-03-18 00:07:22] -rw-r--r--. 2 boinc boinc    597551 Mar 17 20:53 input.tar.gz
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc         0 Mar 17 20:53 boinc_lockfile
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc      2638 Mar 17 20:53 pandaJob.out
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc   1010308 Mar 17 20:53 agis_schedconf.cvmfs.json
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc       444 Mar 17 20:53 workernode_map.json
[2026-03-18 00:07:22] drwx------. 5 boinc boinc      4096 Mar 17 20:53 pilot3
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc 199222408 Mar 18 00:05 HITS.49178984._000123.pool.root.1
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc       529 Mar 18 00:06 boinc_task_state.xml
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc        95 Mar 18 00:06 pilot_heartbeat.json
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc      1033 Mar 18 00:06 memory_monitor_summary.json
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc   1511579 Mar 18 00:06 agis_ddmendpoints.agis.ALL.json
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc    376076 Mar 18 00:06 log.49178984._000123.job.log.tgz.1
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc      6354 Mar 18 00:06 heartbeat.json
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc      8192 Mar 18 00:07 boinc_mmap_file
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc        27 Mar 18 00:07 wrapper_checkpoint.txt
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc      6447 Mar 18 00:07 pilotlog.txt
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc   1609703 Mar 18 00:07 log.49178984._000123.job.log.1
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc       357 Mar 18 00:07 output.list
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc       620 Mar 18 00:07 runtime_log
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc   2007040 Mar 18 00:07 result.tar.gz
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc      9222 Mar 18 00:07 runtime_log.err
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc       665 Mar 18 00:07 YQkMDm1hOM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2pxLDmJXVnRm.diag
[2026-03-18 00:07:22] -rw-r--r--. 1 boinc boinc     21250 Mar 18 00:07 stderr.txt
[2026-03-18 00:07:22] HITS file was successfully produced:
[2026-03-18 00:07:22] -rw-------. 1 boinc boinc 199222408 Mar 18 00:05 shared/HITS.pool.root.1
[2026-03-18 00:07:22]  *** Contents of shared directory: ***
[2026-03-18 00:07:23] total 416780
[2026-03-18 00:07:23] -rw-r--r--. 2 boinc boinc 224925246 Mar 17 20:53 ATLAS.root_0
[2026-03-18 00:07:23] -rw-r--r--. 2 boinc boinc     15845 Mar 17 20:53 start_atlas.sh
[2026-03-18 00:07:23] -rw-r--r--. 2 boinc boinc    597551 Mar 17 20:53 input.tar.gz
[2026-03-18 00:07:23] -rw-------. 1 boinc boinc 199222408 Mar 18 00:05 HITS.pool.root.1
[2026-03-18 00:07:23] -rw-------. 1 boinc boinc   2007040 Mar 18 00:07 result.tar.gz
00:07:24 (3403482): run_atlas exited; CPU time 44273.348439
00:07:24 (3403482): called boinc_finish(0)

</stderr_txt>
]]>

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