Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:28:34 (2221377): wrapper (7.7.26015): starting
06:28:34 (2221377): wrapper: running run_atlas (--nthreads 4)
[2026-03-19 06:28:34] Arguments: --nthreads 4
[2026-03-19 06:28:34] Threads: 4
[2026-03-19 06:28:34] Checking for CVMFS
[2026-03-19 06:28:34] No cvmfs_config command found, will try listing directly
[2026-03-19 06:28:34] CVMFS is ok
[2026-03-19 06:28:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-19 06:28:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-19 06:28:34] Further information can be found at the LHC@home message board.
[2026-03-19 06:28:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-19 06:28:34] Checking for apptainer binary...
[2026-03-19 06:28:34] which: no apptainer in ((null))
[2026-03-19 06:28:34] apptainer is not installed, using version from CVMFS
[2026-03-19 06:28:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-19 06:28:34] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-19 06:28:34] apptainer works
[2026-03-19 06:28:34] Set ATHENA_PROC_NUMBER=4
[2026-03-19 06:28:34] Set ATHENA_CORE_NUMBER=4
[2026-03-19 06:28:34] Starting ATLAS job with PandaID=7056961390
[2026-03-19 06:28:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-19 08:57:25]  *** The last 200 lines of the pilot log: ***
[2026-03-19 08:57:25] 2026-03-19 07:56:28,831 | INFO     | job 7056961390 has state=finished
[2026-03-19 08:57:25] 2026-03-19 07:56:28,832 | INFO     | preparing for final server update for job 7056961390 in state='finished'
[2026-03-19 08:57:25] 2026-03-19 07:56:28,832 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7056961390/jobReport.json
[2026-03-19 08:57:25] 2026-03-19 07:56:28,833 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/0/workernode_map.json
[2026-03-19 08:57:25] 2026-03-19 07:56:28,833 | INFO     | this job has now completed (state=finished)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,833 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,833 | INFO     | log transfer has been attempted: DONE
[2026-03-19 08:57:25] 2026-03-19 07:56:28,833 | INFO     | job 7056961390 has finished - writing final server update
[2026-03-19 08:57:25] 2026-03-19 07:56:28,834 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2293750/.job.ad'
[2026-03-19 08:57:25] 2026-03-19 07:56:28,834 | INFO     | total number of processed events: 400 (read)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,852 | INFO     | using path: /var/lib/boinc/var/slot216/slots/0/PanDA_Pilot-7056961390/memory_monitor_summary.json (trf name=prmon)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,852 | INFO     | extracted standard info from prmon json
[2026-03-19 08:57:25] 2026-03-19 07:56:28,852 | INFO     | extracted standard memory fields from prmon json
[2026-03-19 08:57:25] 2026-03-19 07:56:28,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-19 08:57:25] 2026-03-19 07:56:28,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-19 08:57:25] 2026-03-19 07:56:28,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-19 08:57:25] 2026-03-19 07:56:28,854 | INFO     | fitting pss+swap vs Time
[2026-03-19 08:57:25] 2026-03-19 07:56:28,854 | INFO     | sum of square deviations: 945282840.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,855 | INFO     | sum of deviations: 6190942094.000002
[2026-03-19 08:57:25] 2026-03-19 07:56:28,855 | INFO     | mean x: 1773902547.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,855 | INFO     | mean y: 2326555.151724138
[2026-03-19 08:57:25] 2026-03-19 07:56:28,855 | INFO     | intersect: -11615495629.027687
[2026-03-19 08:57:25] 2026-03-19 07:56:28,855 | INFO     | chi2: 1.071437824283115
[2026-03-19 08:57:25] 2026-03-19 07:56:28,855 | INFO     | sum of square deviations: 850825255.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | sum of deviations: 6039563792.500004
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | mean x: 1773902394.5
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | mean y: 2326310.692857143
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | intersect: -12589679639.167267
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | chi2: 1.0723690692530268
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | current chi2=1.0723690692530268 (change=-0.08691544659017315 %)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | right removable region: 139
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | sum of square deviations: 850825255.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | sum of deviations: -6811933409.500001
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | mean x: 1773902699.5
[2026-03-19 08:57:25] 2026-03-19 07:56:28,856 | INFO     | mean y: 2347043.964285714
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | intersect: 14204684119.544266
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | chi2: 0.007114460282292049
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | current chi2=0.007114460282292049 (change=99.33598944137965 %)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | sum of square deviations: 762879420.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | sum of deviations: -5851567130.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | mean x: 1773902852.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | mean y: 2345370.251851852
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | intersect: 13608835922.292768
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | chi2: 0.006831409779973999
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | current chi2=0.006831409779973999 (change=3.9785238948141304 %)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,857 | INFO     | left removable region: 20
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | sum of square deviations: 522502820.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | sum of deviations: -3652370791.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | mean x: 1773902974.0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | mean y: 2341899.8403361347
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | intersect: 12402181977.843422
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | chi2: 0.005319508234655394
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | current memory leak: -6.99 B/s (using 119 data points, chi2=0.01)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | could have reported an average CPU frequency of 3582 MHz (8 samples)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,858 | INFO     | ..............................
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . Timing measurements:
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . get job = 0 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . initial setup = 5 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . payload setup = 8 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . stage-in = 0 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . payload execution = 8833 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . stage-out = 0 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | . log creation = 0 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,859 | INFO     | ..............................
[2026-03-19 08:57:25] 2026-03-19 07:56:28,908 | INFO     | 
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | job summary report
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | --------------------------------------------------
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | PanDA job id: 7056961390
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | task id: 49180058
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | errors: (none)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | pilot state: finished 
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | transexitcode: 0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | exeerrorcode: 0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | exeerrordiag: 
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | exitcode: 0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | exitmsg: OK
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | cpuconsumptiontime: 34126 s
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | nevents: 400
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | neventsw: 0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | pid: 2251410
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | pgrp: 2251410
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | corecount: 4
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | event service: False
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | sizes: {0: 2280051, 1: 2280313, 11: 2280341, 8845: 2308520, 8846: 2317542, 8847: 2317598, 8848: 2317920}
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | --------------------------------------------------
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | 
[2026-03-19 08:57:25] 2026-03-19 07:56:28,909 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/0
[2026-03-19 08:57:25] 2026-03-19 07:56:28,927 | INFO     | time since job start (8858s) is within the limit (345600.0s)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,928 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | job 7056961390 has completed (purged errors)
[2026-03-19 08:57:25] 2026-03-19 07:56:28,929 | INFO     | overall cleanup function is called
[2026-03-19 08:57:25] 2026-03-19 07:56:29,936 | INFO     | --- collectZombieJob: --- 10, [2251410]
[2026-03-19 08:57:25] 2026-03-19 07:56:29,936 | INFO     | zombie collector waiting for pid 2251410
[2026-03-19 08:57:25] 2026-03-19 07:56:29,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-19 08:57:25] 2026-03-19 07:56:29,936 | INFO     | collected zombie processes
[2026-03-19 08:57:25] 2026-03-19 07:56:29,936 | INFO     | will attempt to kill all subprocesses of pid=2251410
[2026-03-19 08:57:25] 2026-03-19 07:56:30,446 | INFO     | process IDs to be killed: [2251410] (in reverse order)
[2026-03-19 08:57:25] 2026-03-19 07:56:30,680 | WARNING  | found no corresponding commands to process id(s)
[2026-03-19 08:57:25] 2026-03-19 07:56:30,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-19 08:57:25] 2026-03-19 07:56:30,714 | INFO     | did not find any defunct processes belonging to 2251410
[2026-03-19 08:57:25] 2026-03-19 07:56:30,748 | INFO     | did not find any defunct processes belonging to 2251410
[2026-03-19 08:57:25] 2026-03-19 07:56:30,748 | INFO     | ready for new job
[2026-03-19 08:57:25] 2026-03-19 07:56:30,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-19 08:57:25] 2026-03-19 07:56:30,749 | INFO     | **************************************
[2026-03-19 08:57:25] 2026-03-19 07:56:30,749 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-19 08:57:25] 2026-03-19 07:56:30,749 | INFO     | **************************************
[2026-03-19 08:57:25] 2026-03-19 07:56:30,750 | INFO     | 
[2026-03-19 08:57:25] 2026-03-19 07:56:30,756 | INFO     | architecture information:
[2026-03-19 08:57:25] 2026-03-19 07:56:30,756 | INFO     | executing command: cat /etc/os-release
[2026-03-19 08:57:25] 2026-03-19 07:56:30,770 | INFO     | cat /etc/os-release:
[2026-03-19 08:57:25] NAME="CentOS Linux"
[2026-03-19 08:57:25] VERSION="7 (Core)"
[2026-03-19 08:57:25] ID="centos"
[2026-03-19 08:57:25] ID_LIKE="rhel fedora"
[2026-03-19 08:57:25] VERSION_ID="7"
[2026-03-19 08:57:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-19 08:57:25] ANSI_COLOR="0;31"
[2026-03-19 08:57:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-19 08:57:25] HOME_URL="https://www.centos.org/"
[2026-03-19 08:57:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-19 08:57:25] 
[2026-03-19 08:57:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-19 08:57:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-19 08:57:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-19 08:57:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-19 08:57:25] 
[2026-03-19 08:57:25] 2026-03-19 07:56:30,771 | INFO     | **************************************
[2026-03-19 08:57:25] 2026-03-19 07:56:31,273 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/0
[2026-03-19 08:57:25] 2026-03-19 07:56:31,293 | INFO     | sufficient remaining disk space (86691020800 B)
[2026-03-19 08:57:25] 2026-03-19 07:56:31,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-19 08:57:25] 2026-03-19 07:56:31,294 | INFO     | current server update state: UPDATING_FINAL
[2026-03-19 08:57:25] 2026-03-19 07:56:31,294 | INFO     | update_server=False
[2026-03-19 08:57:25] 2026-03-19 07:56:31,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-19 08:57:25] 2026-03-19 07:56:31,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-19 08:57:25] 2026-03-19 07:56:31,534 | INFO     | all data control threads have been joined
[2026-03-19 08:57:25] 2026-03-19 07:56:31,901 | INFO     | all payload control threads have been joined
[2026-03-19 08:57:25] 2026-03-19 07:56:32,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:57:25] 2026-03-19 07:56:32,078 | INFO     | aborting loop
[2026-03-19 08:57:25] 2026-03-19 07:56:32,298 | INFO     | [job] retrieve thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:32,540 | INFO     | [data] control thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:32,545 | INFO     | [payload] validate_post thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:32,610 | INFO     | [job] create_data_payload thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:32,611 | INFO     | [job] validate thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:32,794 | INFO     | [payload] validate_pre thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:32,832 | INFO     | all job control threads have been joined
[2026-03-19 08:57:25] 2026-03-19 07:56:32,906 | INFO     | [payload] control thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:32,922 | INFO     | [payload] failed_post thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:33,045 | INFO     | [data] copytool_in thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:33,083 | INFO     | [job] job monitor thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:33,299 | INFO     | [data] copytool_out thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:33,697 | INFO     | [payload] execute_payloads thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:33,713 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:33,837 | INFO     | [job] control thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:33,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-19 08:57:25] 2026-03-19 07:56:34,746 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-19 08:57:25] 2026-03-19 07:56:34,924 | INFO     | [job] queue monitor thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:56:38,751 | INFO     | [data] queue_monitor thread has finished
[2026-03-19 08:57:25] 2026-03-19 07:57:02,692 | INFO     | PID=2231595 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-19 08:57:25] 2026-03-19 07:57:02,692 | INFO     | .. there are 36 such processes running
[2026-03-19 08:57:25] 2026-03-19 07:57:02,693 | INFO     | found 0 job(s) in 20 queues
[2026-03-19 08:57:25] 2026-03-19 07:57:02,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-19 08:57:25] 2026-03-19 07:57:02,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-19 08:57:25] 2026-03-19 07:57:04,829 | INFO     | [monitor] cgroup control has ended
[2026-03-19 08:57:25] 2026-03-19 07:57:05,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23029704369984)>', '<ExcThread(monitor, started 23029458663168)>']
[2026-03-19 08:57:25] 2026-03-19 07:57:05,715 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-19 08:57:25] 2026-03-19 07:57:05,715 | INFO     | [monitor] control thread has ended
[2026-03-19 08:57:25] 2026-03-19 07:57:10,599 | INFO     | all workflow threads have been joined
[2026-03-19 08:57:25] 2026-03-19 07:57:10,599 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-19 08:57:25] 2026-03-19 07:57:10,599 | INFO     | traces error code: 0
[2026-03-19 08:57:25] 2026-03-19 07:57:10,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-19 08:57:25] 2026-03-19 07:57:10,789 [wrapper] ==== pilot stdout END ====
[2026-03-19 08:57:25] 2026-03-19 07:57:10,792 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-19 08:57:25] 2026-03-19 07:57:10,795 [wrapper] pilotpid: 2231595
[2026-03-19 08:57:25] 2026-03-19 07:57:10,797 [wrapper] Pilot exit status: 0
[2026-03-19 08:57:25] 2026-03-19 07:57:10,818 [wrapper] pandaids: 7056961390
[2026-03-19 08:57:25] 2026-03-19 07:57:10,968 [wrapper] cleanup supervisor_pilot 2762157 2231596
[2026-03-19 08:57:25] 2026-03-19 07:57:10,971 [wrapper] Test setup, not cleaning
[2026-03-19 08:57:25] 2026-03-19 07:57:10,974 [wrapper] apfmon messages muted
[2026-03-19 08:57:25] 2026-03-19 07:57:10,976 [wrapper] ==== wrapper stdout END ====
[2026-03-19 08:57:25] 2026-03-19 07:57:10,978 [wrapper] ==== wrapper stderr END ====
[2026-03-19 08:57:25]  *** Error codes and diagnostics ***
[2026-03-19 08:57:25]     "exeErrorCode": 0,
[2026-03-19 08:57:25]     "exeErrorDiag": "",
[2026-03-19 08:57:25]     "pilotErrorCode": 0,
[2026-03-19 08:57:25]     "pilotErrorDiag": "",
[2026-03-19 08:57:25]  *** Listing of results directory ***
[2026-03-19 08:57:25] total 420580
[2026-03-19 08:57:25] -rwx------. 1 boinc boinc     36322 Mar 16 17:00 runpilot2-wrapper.sh
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc    585013 Mar 16 17:03 pilot3.tar.gz
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc      5111 Mar 16 17:04 queuedata.json
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc       100 Mar 19 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-19 08:57:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar 19 06:28 run_atlas
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc       105 Mar 19 06:28 job.xml
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc      6709 Mar 19 06:28 init_data.xml
[2026-03-19 08:57:25] -rw-r--r--. 2 boinc boinc 230812610 Mar 19 06:28 EVNT.49132639._000010.pool.root.1
[2026-03-19 08:57:25] -rw-r--r--. 2 boinc boinc     15845 Mar 19 06:28 start_atlas.sh
[2026-03-19 08:57:25] drwxrwx--x. 2 boinc boinc      4096 Mar 19 06:28 shared
[2026-03-19 08:57:25] -rw-r--r--. 2 boinc boinc    597543 Mar 19 06:28 input.tar.gz
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc         0 Mar 19 06:28 boinc_lockfile
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc      2614 Mar 19 06:28 pandaJob.out
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc   1010817 Mar 19 06:28 agis_schedconf.cvmfs.json
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc   1511579 Mar 19 06:28 agis_ddmendpoints.agis.ALL.json
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc       445 Mar 19 06:28 workernode_map.json
[2026-03-19 08:57:25] drwx------. 5 boinc boinc      4096 Mar 19 06:28 pilot3
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc 192744450 Mar 19 08:56 HITS.49180058._000248.pool.root.1
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc       528 Mar 19 08:56 boinc_task_state.xml
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc      1031 Mar 19 08:56 memory_monitor_summary.json
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc    337354 Mar 19 08:56 log.49180058._000248.job.log.tgz.1
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc      6349 Mar 19 08:56 heartbeat.json
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc        95 Mar 19 08:57 pilot_heartbeat.json
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc      4830 Mar 19 08:57 pilotlog.txt
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc   1248780 Mar 19 08:57 log.49180058._000248.job.log.1
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc       357 Mar 19 08:57 output.list
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc       620 Mar 19 08:57 runtime_log
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc   1607680 Mar 19 08:57 result.tar.gz
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc       663 Mar 19 08:57 sVtKDmHYPM9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLLyLDmTNg7sm.diag
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc      9221 Mar 19 08:57 runtime_log.err
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc        26 Mar 19 08:57 wrapper_checkpoint.txt
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc      8192 Mar 19 08:57 boinc_mmap_file
[2026-03-19 08:57:25] -rw-r--r--. 1 boinc boinc     21136 Mar 19 08:57 stderr.txt
[2026-03-19 08:57:25] HITS file was successfully produced:
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc 192744450 Mar 19 08:56 shared/HITS.pool.root.1
[2026-03-19 08:57:25]  *** Contents of shared directory: ***
[2026-03-19 08:57:25] total 415812
[2026-03-19 08:57:25] -rw-r--r--. 2 boinc boinc 230812610 Mar 19 06:28 ATLAS.root_0
[2026-03-19 08:57:25] -rw-r--r--. 2 boinc boinc     15845 Mar 19 06:28 start_atlas.sh
[2026-03-19 08:57:25] -rw-r--r--. 2 boinc boinc    597543 Mar 19 06:28 input.tar.gz
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc 192744450 Mar 19 08:56 HITS.pool.root.1
[2026-03-19 08:57:25] -rw-------. 1 boinc boinc   1607680 Mar 19 08:57 result.tar.gz
08:57:27 (2221377): run_atlas exited; CPU time 34577.707963
08:57:27 (2221377): called boinc_finish(0)

</stderr_txt>
]]>

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