Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:38:47 (19471): wrapper (7.7.26015): starting
16:38:47 (19471): wrapper: running run_atlas (--nthreads 8)
[2026-03-17 16:38:47] Arguments: --nthreads 8
[2026-03-17 16:38:47] Threads: 8
[2026-03-17 16:38:47] Checking for CVMFS
[2026-03-17 16:38:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-17 16:38:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-17 16:38:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-17 16:38:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-17 16:38:53] 2.11.2.0 1091 132085 137932 157376 0 53 19703202 25165825 4517 130560 152 43949190 99.833 30071215 1022 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-17 16:38:53] CVMFS is ok
[2026-03-17 16:38:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-17 16:38:53] Checking for apptainer binary...
[2026-03-17 16:38:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-17 16:38:53] Running /usr/bin/apptainer --version
[2026-03-17 16:38:53] apptainer version 1.3.2-1.el7
[2026-03-17 16:38:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-17 16:38:58] cg-vwn498.simple-grid.lan
[2026-03-17 16:38:58] apptainer works
[2026-03-17 16:38:58] Set ATHENA_PROC_NUMBER=8
[2026-03-17 16:38:58] Set ATHENA_CORE_NUMBER=8
[2026-03-17 16:38:58] Starting ATLAS job with PandaID=7056964997
[2026-03-17 16:38:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 00:37:10]  *** The last 200 lines of the pilot log: ***
[2026-03-18 00:37:11] 2026-03-17 23:36:21,246 | INFO     | extracted standard memory fields from prmon json
[2026-03-18 00:37:11] 2026-03-17 23:36:21,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-18 00:37:11] 2026-03-17 23:36:21,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-18 00:37:11] 2026-03-17 23:36:21,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-18 00:37:11] 2026-03-17 23:36:21,254 | INFO     | fitting pss+swap vs Time
[2026-03-18 00:37:11] 2026-03-17 23:36:21,255 | INFO     | sum of square deviations: 30182128695.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,261 | INFO     | sum of deviations: 183620052891.5
[2026-03-18 00:37:11] 2026-03-17 23:36:21,261 | INFO     | mean x: 1773776524.5
[2026-03-18 00:37:11] 2026-03-17 23:36:21,262 | INFO     | mean y: 2474366.1673913044
[2026-03-18 00:37:11] 2026-03-17 23:36:21,262 | INFO     | intersect: -10788710793.027393
[2026-03-18 00:37:11] 2026-03-17 23:36:21,262 | INFO     | chi2: 6.103317645802374
[2026-03-18 00:37:11] 2026-03-17 23:36:21,263 | INFO     | sum of square deviations: 29208584860.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,269 | INFO     | sum of deviations: 211959059601.99997
[2026-03-18 00:37:11] 2026-03-17 23:36:21,269 | INFO     | mean x: 1773776372.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,269 | INFO     | mean y: 2478762.8945054943
[2026-03-18 00:37:11] 2026-03-17 23:36:21,269 | INFO     | intersect: -12869352363.311152
[2026-03-18 00:37:11] 2026-03-17 23:36:21,270 | INFO     | chi2: 5.351740867782135
[2026-03-18 00:37:11] 2026-03-17 23:36:21,270 | INFO     | current chi2=5.351740867782135 (change=12.314233366784439 %)
[2026-03-18 00:37:11] 2026-03-17 23:36:21,270 | INFO     | right removable region: 454
[2026-03-18 00:37:11] 2026-03-17 23:36:21,271 | INFO     | sum of square deviations: 29208584860.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,277 | INFO     | sum of deviations: 27407917624.999996
[2026-03-18 00:37:11] 2026-03-17 23:36:21,277 | INFO     | mean x: 1773776677.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,277 | INFO     | mean y: 2498823.0857142857
[2026-03-18 00:37:11] 2026-03-17 23:36:21,277 | INFO     | intersect: -1661927073.6628563
[2026-03-18 00:37:11] 2026-03-17 23:36:21,278 | INFO     | chi2: 1.8287398675856648
[2026-03-18 00:37:11] 2026-03-17 23:36:21,278 | INFO     | current chi2=1.8287398675856648 (change=70.03695410080121 %)
[2026-03-18 00:37:11] 2026-03-17 23:36:21,279 | INFO     | sum of square deviations: 28256204212.5
[2026-03-18 00:37:11] 2026-03-17 23:36:21,284 | INFO     | sum of deviations: -34978788146.5
[2026-03-18 00:37:11] 2026-03-17 23:36:21,285 | INFO     | mean x: 1773776829.5
[2026-03-18 00:37:11] 2026-03-17 23:36:21,285 | INFO     | mean y: 2508773.237777778
[2026-03-18 00:37:11] 2026-03-17 23:36:21,285 | INFO     | intersect: 2198294288.930067
[2026-03-18 00:37:11] 2026-03-17 23:36:21,285 | INFO     | chi2: 0.8947963213199446
[2026-03-18 00:37:11] 2026-03-17 23:36:21,286 | INFO     | current chi2=0.8947963213199446 (change=51.07033333826364 %)
[2026-03-18 00:37:11] 2026-03-17 23:36:21,286 | INFO     | sum of square deviations: 27324754190.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,292 | INFO     | sum of deviations: -37235825082.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,292 | INFO     | mean x: 1773776982.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,292 | INFO     | mean y: 2509137.3258426967
[2026-03-18 00:37:11] 2026-03-17 23:36:21,292 | INFO     | intersect: 2419659863.6222706
[2026-03-18 00:37:11] 2026-03-17 23:36:21,293 | INFO     | chi2: 0.8843438173928568
[2026-03-18 00:37:11] 2026-03-17 23:36:21,293 | INFO     | current chi2=0.8843438173928568 (change=1.1681433727475428 %)
[2026-03-18 00:37:11] 2026-03-17 23:36:21,293 | INFO     | left removable region: 30
[2026-03-18 00:37:11] 2026-03-17 23:36:21,294 | INFO     | sum of square deviations: 23635978050.0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,299 | INFO     | sum of deviations: 25411134566.5
[2026-03-18 00:37:11] 2026-03-17 23:36:21,299 | INFO     | mean x: 1773777256.5
[2026-03-18 00:37:11] 2026-03-17 23:36:21,299 | INFO     | mean y: 2508306.738207547
[2026-03-18 00:37:11] 2026-03-17 23:36:21,300 | INFO     | intersect: -1904486718.4123886
[2026-03-18 00:37:11] 2026-03-17 23:36:21,300 | INFO     | chi2: 0.0017641131452478544
[2026-03-18 00:37:11] 2026-03-17 23:36:21,300 | INFO     | current memory leak: 1.08 B/s (using 424 data points, chi2=0.00)
[2026-03-18 00:37:11] 2026-03-17 23:36:21,301 | INFO     | could have reported an average CPU frequency of 2249 MHz (19 samples)
[2026-03-18 00:37:11] 2026-03-17 23:36:21,301 | INFO     | ..............................
[2026-03-18 00:37:11] 2026-03-17 23:36:21,301 | INFO     | . Timing measurements:
[2026-03-18 00:37:11] 2026-03-17 23:36:21,301 | INFO     | . get job = 0 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,301 | INFO     | . initial setup = 105 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,301 | INFO     | . payload setup = 142 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,302 | INFO     | . stage-in = 0 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,302 | INFO     | . payload execution = 28165 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,302 | INFO     | . stage-out = 3 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,302 | INFO     | . log creation = 1 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,302 | INFO     | ..............................
[2026-03-18 00:37:11] 2026-03-17 23:36:21,840 | INFO     | 
[2026-03-18 00:37:11] 2026-03-17 23:36:21,840 | INFO     | job summary report
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | --------------------------------------------------
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | PanDA job id: 7056964997
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | task id: 49180417
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | errors: (none)
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | pilot state: finished 
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | transexitcode: 0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | exeerrorcode: 0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | exeerrordiag: 
[2026-03-18 00:37:11] 2026-03-17 23:36:21,841 | INFO     | exitcode: 0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | exitmsg: OK
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | cpuconsumptiontime: 111265 s
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | nevents: 400
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | neventsw: 0
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | pid: 28104
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | pgrp: 28104
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | corecount: 8
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | event service: False
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | sizes: {0: 2279178, 1: 2279863, 2: 2280324, 12: 2280324, 28312: 2317180, 28317: 2326178, 28318: 2326556}
[2026-03-18 00:37:11] 2026-03-17 23:36:21,842 | INFO     | --------------------------------------------------
[2026-03-18 00:37:11] 2026-03-17 23:36:21,843 | INFO     | 
[2026-03-18 00:37:11] 2026-03-17 23:36:21,843 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-18 00:37:11] 2026-03-17 23:36:22,043 | INFO     | PID=23565 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 00:37:11] 2026-03-17 23:36:22,043 | INFO     | .. there are 9 such processes running
[2026-03-18 00:37:11] 2026-03-17 23:36:22,151 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,151 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,151 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,151 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,152 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,153 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 00:37:11] 2026-03-17 23:36:22,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,153 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 00:37:11] 2026-03-17 23:36:22,153 | INFO     | job 7056964997 has completed (purged errors)
[2026-03-18 00:37:11] 2026-03-17 23:36:22,153 | INFO     | overall cleanup function is called
[2026-03-18 00:37:11] 2026-03-17 23:36:23,162 | INFO     | --- collectZombieJob: --- 10, [28104]
[2026-03-18 00:37:11] 2026-03-17 23:36:23,162 | INFO     | zombie collector waiting for pid 28104
[2026-03-18 00:37:11] 2026-03-17 23:36:23,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 00:37:11] 2026-03-17 23:36:23,163 | INFO     | collected zombie processes
[2026-03-18 00:37:11] 2026-03-17 23:36:23,163 | INFO     | will attempt to kill all subprocesses of pid=28104
[2026-03-18 00:37:11] 2026-03-17 23:36:23,313 | INFO     | process IDs to be killed: [28104] (in reverse order)
[2026-03-18 00:37:11] 2026-03-17 23:36:24,245 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 00:37:11] 2026-03-17 23:36:24,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 00:37:11] 2026-03-17 23:36:24,248 | INFO     | did not find any defunct processes belonging to 28104
[2026-03-18 00:37:11] 2026-03-17 23:36:24,251 | INFO     | did not find any defunct processes belonging to 28104
[2026-03-18 00:37:11] 2026-03-17 23:36:24,251 | INFO     | ready for new job
[2026-03-18 00:37:11] 2026-03-17 23:36:24,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 00:37:11] 2026-03-17 23:36:24,255 | INFO     | **************************************
[2026-03-18 00:37:11] 2026-03-17 23:36:24,255 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 00:37:11] 2026-03-17 23:36:24,255 | INFO     | **************************************
[2026-03-18 00:37:11] 2026-03-17 23:36:24,255 | INFO     | 
[2026-03-18 00:37:11] 2026-03-17 23:36:24,256 | INFO     | pilot is running in a VM
[2026-03-18 00:37:11] 2026-03-17 23:36:24,256 | INFO     | architecture information:
[2026-03-18 00:37:11] 2026-03-17 23:36:24,256 | INFO     | executing command: cat /etc/os-release
[2026-03-18 00:37:11] 2026-03-17 23:36:24,500 | INFO     | cat /etc/os-release:
[2026-03-18 00:37:11] NAME="CentOS Linux"
[2026-03-18 00:37:11] VERSION="7 (Core)"
[2026-03-18 00:37:11] ID="centos"
[2026-03-18 00:37:11] ID_LIKE="rhel fedora"
[2026-03-18 00:37:11] VERSION_ID="7"
[2026-03-18 00:37:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 00:37:11] ANSI_COLOR="0;31"
[2026-03-18 00:37:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 00:37:11] HOME_URL="https://www.centos.org/"
[2026-03-18 00:37:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 00:37:11] 
[2026-03-18 00:37:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 00:37:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 00:37:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 00:37:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 00:37:11] 
[2026-03-18 00:37:11] 2026-03-17 23:36:24,500 | INFO     | **************************************
[2026-03-18 00:37:11] 2026-03-17 23:36:25,003 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-18 00:37:11] 2026-03-17 23:36:25,331 | INFO     | sufficient remaining disk space (496751345664 B)
[2026-03-18 00:37:11] 2026-03-17 23:36:25,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 00:37:11] 2026-03-17 23:36:25,331 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 00:37:11] 2026-03-17 23:36:25,332 | INFO     | update_server=False
[2026-03-18 00:37:11] 2026-03-17 23:36:25,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 00:37:11] 2026-03-17 23:36:25,467 | INFO     | all data control threads have been joined
[2026-03-18 00:37:11] 2026-03-17 23:36:25,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 00:37:11] 2026-03-17 23:36:25,742 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-18 00:37:11] 2026-03-17 23:36:25,742 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-18 00:37:11] 2026-03-17 23:36:25,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 00:37:11] 2026-03-17 23:36:25,743 | INFO     | will abort loop
[2026-03-18 00:37:11] 2026-03-17 23:36:25,964 | INFO     | all payload control threads have been joined
[2026-03-18 00:37:11] 2026-03-17 23:36:26,337 | INFO     | [job] retrieve thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:26,345 | INFO     | [job] validate thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:26,372 | INFO     | all job control threads have been joined
[2026-03-18 00:37:11] 2026-03-17 23:36:26,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 00:37:11] 2026-03-17 23:36:26,473 | INFO     | [data] control thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:26,496 | INFO     | [payload] validate_post thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:26,650 | INFO     | [payload] failed_post thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:26,678 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:26,748 | INFO     | [job] job monitor thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:26,970 | INFO     | [payload] control thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:27,113 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:27,152 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:27,165 | INFO     | [data] copytool_in thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:27,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 00:37:11] 2026-03-17 23:36:27,378 | INFO     | [job] control thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:27,441 | INFO     | [job] queue monitor thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:27,639 | INFO     | [data] copytool_out thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:31,259 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:36,287 | INFO     | job.realtimelogging is not enabled
[2026-03-18 00:37:11] 2026-03-17 23:36:37,293 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 00:37:11] 2026-03-17 23:36:54,236 | INFO     | PID=23565 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-18 00:37:11] 2026-03-17 23:36:54,236 | INFO     | .. there are 9 such processes running
[2026-03-18 00:37:11] 2026-03-17 23:36:54,238 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 00:37:11] 2026-03-17 23:36:54,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 00:37:11] 2026-03-17 23:36:54,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 00:37:11] 2026-03-17 23:36:59,941 | INFO     | [monitor] cgroup control has ended
[2026-03-18 00:37:11] 2026-03-17 23:37:00,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922333529920)>', '<ExcThread(monitor, started 139921293563648)>']
[2026-03-18 00:37:11] 2026-03-17 23:37:01,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 00:37:11] 2026-03-17 23:37:01,279 | INFO     | [monitor] control thread has ended
[2026-03-18 00:37:11] 2026-03-17 23:37:05,340 | INFO     | all workflow threads have been joined
[2026-03-18 00:37:11] 2026-03-17 23:37:05,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 00:37:11] 2026-03-17 23:37:05,341 | INFO     | traces error code: 0
[2026-03-18 00:37:11] 2026-03-17 23:37:05,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 00:37:11] 2026-03-17 23:37:05,693 [wrapper] ==== pilot stdout END ====
[2026-03-18 00:37:11] 2026-03-17 23:37:05,789 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 00:37:11] 2026-03-17 23:37:05,887 [wrapper] pilotpid: 23565
[2026-03-18 00:37:11] 2026-03-17 23:37:06,003 [wrapper] Pilot exit status: 0
[2026-03-18 00:37:11] 2026-03-17 23:37:06,518 [wrapper] pandaids: 7056964997
[2026-03-18 00:37:11] 2026-03-17 23:37:07,640 [wrapper] cleanup supervisor_pilot  7137 23566
[2026-03-18 00:37:11] 2026-03-17 23:37:07,762 [wrapper] Test setup, not cleaning
[2026-03-18 00:37:11] 2026-03-17 23:37:07,888 [wrapper] apfmon messages muted
[2026-03-18 00:37:11] 2026-03-17 23:37:07,987 [wrapper] ==== wrapper stdout END ====
[2026-03-18 00:37:11] 2026-03-17 23:37:08,099 [wrapper] ==== wrapper stderr END ====
[2026-03-18 00:37:11]  *** Error codes and diagnostics ***
[2026-03-18 00:37:11]     "exeErrorCode": 0,
[2026-03-18 00:37:11]     "exeErrorDiag": "",
[2026-03-18 00:37:11]     "pilotErrorCode": 0,
[2026-03-18 00:37:11]     "pilotErrorDiag": "",
[2026-03-18 00:37:11]  *** Listing of results directory ***
[2026-03-18 00:37:11] total 425232
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc    585013 Mar 16 16:57 pilot3.tar.gz
[2026-03-18 00:37:11] -rwx------. 1 boinc boinc     36322 Mar 16 16:58 runpilot2-wrapper.sh
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc      5111 Mar 16 16:58 queuedata.json
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc       100 Mar 17 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 00:37:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 17 16:38 run_atlas
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc       105 Mar 17 16:38 job.xml
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc      6391 Mar 17 16:38 init_data.xml
[2026-03-18 00:37:11] -rw-r--r--. 2 boinc boinc 220954250 Mar 17 16:38 EVNT.49133205._000006.pool.root.1
[2026-03-18 00:37:11] -rw-r--r--. 2 boinc boinc     15845 Mar 17 16:38 start_atlas.sh
[2026-03-18 00:37:11] drwxrwx--x. 2 boinc boinc        68 Mar 17 16:38 shared
[2026-03-18 00:37:11] -rw-r--r--. 2 boinc boinc    597529 Mar 17 16:38 input.tar.gz
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc         0 Mar 17 16:38 boinc_lockfile
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc      2585 Mar 17 16:38 pandaJob.out
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc       415 Mar 17 16:44 workernode_map.json
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc   1010308 Mar 17 16:44 agis_schedconf.cvmfs.json
[2026-03-18 00:37:11] drwx------. 5 boinc boinc      4096 Mar 17 16:44 pilot3
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc 201394775 Mar 18 00:34 HITS.49180417._000150.pool.root.1
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc       532 Mar 18 00:35 boinc_task_state.xml
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc      1016 Mar 18 00:36 memory_monitor_summary.json
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc   1511579 Mar 18 00:36 agis_ddmendpoints.agis.ALL.json
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc    668815 Mar 18 00:36 log.49180417._000150.job.log.tgz.1
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc      6316 Mar 18 00:36 heartbeat.json
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc        29 Mar 18 00:36 wrapper_checkpoint.txt
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc      8192 Mar 18 00:36 boinc_mmap_file
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc        95 Mar 18 00:36 pilot_heartbeat.json
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc      5138 Mar 18 00:37 pilotlog.txt
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc   3912343 Mar 18 00:37 log.49180417._000150.job.log.1
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc       357 Mar 18 00:37 output.list
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc       620 Mar 18 00:37 runtime_log
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc   4597760 Mar 18 00:37 result.tar.gz
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc      8816 Mar 18 00:37 runtime_log.err
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc       658 Mar 18 00:37 5gcLDmsVPM9n9Rq4apOajLDm4fhM0noT9bVooX4SDm71uLDmJCEPfn.diag
[2026-03-18 00:37:11] -rw-r--r--. 1 boinc boinc     20765 Mar 18 00:37 stderr.txt
[2026-03-18 00:37:11] HITS file was successfully produced:
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc 201394775 Mar 18 00:34 shared/HITS.pool.root.1
[2026-03-18 00:37:11]  *** Contents of shared directory: ***
[2026-03-18 00:37:11] total 417544
[2026-03-18 00:37:11] -rw-r--r--. 2 boinc boinc 220954250 Mar 17 16:38 ATLAS.root_0
[2026-03-18 00:37:11] -rw-r--r--. 2 boinc boinc     15845 Mar 17 16:38 start_atlas.sh
[2026-03-18 00:37:11] -rw-r--r--. 2 boinc boinc    597529 Mar 17 16:38 input.tar.gz
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc 201394775 Mar 18 00:34 HITS.pool.root.1
[2026-03-18 00:37:11] -rw-------. 1 boinc boinc   4597760 Mar 18 00:37 result.tar.gz
00:37:12 (19471): run_atlas exited; CPU time 111673.288159
00:37:12 (19471): called boinc_finish(0)

</stderr_txt>
]]>

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